RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ABCA5Q8WWZ7 1642 aa22.83■■□□□ 1.24
GABPB1-202ENST00000359031 APLP2Q06481 763 aa22.82■■□□□ 1.24
GABPB1-202ENST00000359031 TTBK1Q5TCY1 1321 aaPredicted RBP22.82■■□□□ 1.24
GABPB1-202ENST00000359031 TRHP20396 242 aaPredicted RBP22.81■■□□□ 1.24
GABPB1-202ENST00000359031 RANGAP1P46060 587 aaPredicted RBP22.8■■□□□ 1.24
GABPB1-202ENST00000359031 FBLN2P98095 1184 aa22.79■■□□□ 1.24
GABPB1-202ENST00000359031 CHD1O14646 1710 aa22.78■■□□□ 1.24
GABPB1-202ENST00000359031 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.24
GABPB1-202ENST00000359031 CTTNBP2Q8WZ74 1663 aa22.76■■□□□ 1.23
GABPB1-202ENST00000359031 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
GABPB1-202ENST00000359031 EFCAB5A4FU69 1503 aa22.68■■□□□ 1.22
GABPB1-202ENST00000359031 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
GABPB1-202ENST00000359031 MAP3K1Q13233 1512 aa22.66■■□□□ 1.22
GABPB1-202ENST00000359031 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
GABPB1-202ENST00000359031 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
GABPB1-202ENST00000359031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
GABPB1-202ENST00000359031 FHAD1B1AJZ9 1412 aa22.61■■□□□ 1.21
GABPB1-202ENST00000359031 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
GABPB1-202ENST00000359031 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
GABPB1-202ENST00000359031 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.21
GABPB1-202ENST00000359031 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
GABPB1-202ENST00000359031 PCF11O94913 1555 aaKnown RBP22.55■■□□□ 1.2
GABPB1-202ENST00000359031 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
GABPB1-202ENST00000359031 RRBP1Q9P2E9 1410 aaKnown RBP22.52■■□□□ 1.2
GABPB1-202ENST00000359031 SAMD9Q5K651 1589 aa22.51■■□□□ 1.19
GABPB1-202ENST00000359031 KANK4Q5T7N3 995 aaPredicted RBP22.5■■□□□ 1.19
GABPB1-202ENST00000359031 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
GABPB1-202ENST00000359031 FYCO1Q9BQS8 1478 aa22.5■■□□□ 1.19
GABPB1-202ENST00000359031 CLASP1Q7Z460 1538 aa22.49■■□□□ 1.19
GABPB1-202ENST00000359031 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
GABPB1-202ENST00000359031 MAGI1Q96QZ7 1491 aaPredicted RBP22.46■■□□□ 1.19
GABPB1-202ENST00000359031 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
GABPB1-202ENST00000359031 LRRC9Q6ZRR7 1453 aa22.44■■□□□ 1.18
GABPB1-202ENST00000359031 CASKIN1Q8WXD9 1431 aa22.44■■□□□ 1.18
GABPB1-202ENST00000359031 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
GABPB1-202ENST00000359031 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
GABPB1-202ENST00000359031 FMN1Q68DA7 1419 aa22.42■■□□□ 1.18
GABPB1-202ENST00000359031 SYNJ2O15056 1496 aa22.4■■□□□ 1.18
GABPB1-202ENST00000359031 CCNB3Q8WWL7 1395 aa22.37■■□□□ 1.17
GABPB1-202ENST00000359031 IQGAP2Q13576 1575 aa22.34■■□□□ 1.17
GABPB1-202ENST00000359031 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
GABPB1-202ENST00000359031 LRRIQ1Q96JM4 1722 aa22.26■■□□□ 1.15
GABPB1-202ENST00000359031 PHLDB1Q86UU1 1377 aa22.23■■□□□ 1.15
GABPB1-202ENST00000359031 UGGT2Q9NYU1 1516 aa22.22■■□□□ 1.15
GABPB1-202ENST00000359031 CLSPNQ9HAW4 1339 aa22.2■■□□□ 1.15
GABPB1-202ENST00000359031 HECW1Q76N89 1606 aa22.2■■□□□ 1.14
GABPB1-202ENST00000359031 CCDC18Q5T9S5 1454 aa22.18■■□□□ 1.14
GABPB1-202ENST00000359031 EHBP1L1Q8N3D4 1523 aa22.17■■□□□ 1.14
GABPB1-202ENST00000359031 GRIN2AQ12879 1464 aa22.17■■□□□ 1.14
GABPB1-202ENST00000359031 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
GABPB1-202ENST00000359031 DHX57Q6P158 1386 aaKnown RBP22.15■■□□□ 1.14
GABPB1-202ENST00000359031 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.15■■□□□ 1.143e-6■■□□□ 12.8
GABPB1-202ENST00000359031 KIAA0586Q9BVV6 1533 aa22.15■■□□□ 1.14
GABPB1-202ENST00000359031 SUPT6HQ7KZ85 1726 aaKnown RBP22.14■■□□□ 1.14
GABPB1-202ENST00000359031 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
GABPB1-202ENST00000359031 KIAA0556O60303 1618 aa22.12■■□□□ 1.13
GABPB1-202ENST00000359031 MTUS2Q5JR59 1369 aa22.11■■□□□ 1.13
GABPB1-202ENST00000359031 CEP170Q5SW79 1584 aa22.07■■□□□ 1.12
GABPB1-202ENST00000359031 FGD6Q6ZV73 1430 aa22.06■■□□□ 1.12
GABPB1-202ENST00000359031 NCOA2Q15596 1464 aa22.05■■□□□ 1.12
GABPB1-202ENST00000359031 NUP160Q12769 1436 aa22.04■■□□□ 1.12
GABPB1-202ENST00000359031 DISP1Q96F81 1524 aa22.04■■□□□ 1.12
GABPB1-202ENST00000359031 SETD5Q9C0A6 1442 aa22.03■■□□□ 1.12
GABPB1-202ENST00000359031 EPRSP07814 1512 aaKnown RBP22.03■■□□□ 1.12
GABPB1-202ENST00000359031 RAB3GAP2Q9H2M9 1393 aa22.02■■□□□ 1.12
GABPB1-202ENST00000359031 ITGAEP38570 1179 aa22.01■■□□□ 1.11
GABPB1-202ENST00000359031 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
GABPB1-202ENST00000359031 MYOM3Q5VTT5 1437 aa22.01■■□□□ 1.11
GABPB1-202ENST00000359031 FAM50AQ14320 339 aaKnown RBP22■■□□□ 1.11
GABPB1-202ENST00000359031 SHROOM2Q13796 1616 aa21.97■■□□□ 1.11
GABPB1-202ENST00000359031 RAPGEF6Q8TEU7 1601 aa21.97■■□□□ 1.11
GABPB1-202ENST00000359031 PTPN23Q9H3S7 1636 aa21.95■■□□□ 1.1
GABPB1-202ENST00000359031 ZNF316A6NFI3 1004 aaPredicted RBP21.94■■□□□ 1.1
GABPB1-202ENST00000359031 CDK13Q14004 1512 aaKnown RBP21.94■■□□□ 1.1
GABPB1-202ENST00000359031 MAPKBP1O60336 1514 aa21.92■■□□□ 1.1
GABPB1-202ENST00000359031 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
GABPB1-202ENST00000359031 TCOF1Q13428 1488 aaKnown RBP21.91■■□□□ 1.1
GABPB1-202ENST00000359031 KIF13AQ9H1H9 1805 aa21.88■■□□□ 1.09
GABPB1-202ENST00000359031 NUP153P49790 1475 aaKnown RBP21.88■■□□□ 1.09
GABPB1-202ENST00000359031 DIEXFQ68CQ4 756 aaKnown RBP21.88■■□□□ 1.09
GABPB1-202ENST00000359031 CARMIL2Q6F5E8 1435 aa21.85■■□□□ 1.09
GABPB1-202ENST00000359031 HFM1A2PYH4 1435 aa21.85■■□□□ 1.09
GABPB1-202ENST00000359031 MIA2Q96PC5 1412 aa21.85■■□□□ 1.09
GABPB1-202ENST00000359031 NPM1P06748 294 aaKnown RBP eCLIP21.84■■□□□ 1.09
GABPB1-202ENST00000359031 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
GABPB1-202ENST00000359031 FAM69CQ0P6D2 419 aa21.82■■□□□ 1.08
GABPB1-202ENST00000359031 GCC2Q8IWJ2 1684 aa21.81■■□□□ 1.08
GABPB1-202ENST00000359031 PTPRKQ15262 1439 aa21.8■■□□□ 1.08
GABPB1-202ENST00000359031 ADCY10Q96PN6 1610 aa21.78■■□□□ 1.08
GABPB1-202ENST00000359031 AKNAQ7Z591 1439 aa21.78■■□□□ 1.08
GABPB1-202ENST00000359031 ABCC10Q5T3U5 1492 aa21.77■■□□□ 1.08
GABPB1-202ENST00000359031 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
GABPB1-202ENST00000359031 ABCA8O94911 1581 aa21.74■■□□□ 1.07
GABPB1-202ENST00000359031 NAIPQ13075 1403 aa21.74■■□□□ 1.07
GABPB1-202ENST00000359031 PLB1Q6P1J6 1458 aa21.73■■□□□ 1.07
GABPB1-202ENST00000359031 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
GABPB1-202ENST00000359031 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
GABPB1-202ENST00000359031 UACAQ9BZF9 1416 aa21.72■■□□□ 1.07
GABPB1-202ENST00000359031 DIP2BQ9P265 1576 aa21.71■■□□□ 1.07
GABPB1-202ENST00000359031 DNMT1P26358 1616 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms