RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 APLP2Q06481 763 aa19.46■□□□□ 0.71
GGPS1-202ENST00000358966 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
GGPS1-202ENST00000358966 KANK4Q5T7N3 995 aaPredicted RBP19.43■□□□□ 0.7
GGPS1-202ENST00000358966 IFT140Q96RY7 1462 aa19.4■□□□□ 0.7
GGPS1-202ENST00000358966 FHOD3Q2V2M9 1422 aa19.4■□□□□ 0.7
GGPS1-202ENST00000358966 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
GGPS1-202ENST00000358966 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
GGPS1-202ENST00000358966 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
GGPS1-202ENST00000358966 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
GGPS1-202ENST00000358966 GRIN2BQ13224 1484 aa19.34■□□□□ 0.69
GGPS1-202ENST00000358966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.69
GGPS1-202ENST00000358966 ADAMTS12P58397 1594 aa19.33■□□□□ 0.69
GGPS1-202ENST00000358966 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
GGPS1-202ENST00000358966 FHAD1B1AJZ9 1412 aa19.31■□□□□ 0.68
GGPS1-202ENST00000358966 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
GGPS1-202ENST00000358966 FBLN2P98095 1184 aa19.29■□□□□ 0.68
GGPS1-202ENST00000358966 PCF11O94913 1555 aaKnown RBP19.27■□□□□ 0.68
GGPS1-202ENST00000358966 EFCAB5A4FU69 1503 aa19.2■□□□□ 0.66
GGPS1-202ENST00000358966 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
GGPS1-202ENST00000358966 TIAM1Q13009 1591 aa19.18■□□□□ 0.66
GGPS1-202ENST00000358966 ARID3CA6NKF2 412 aa19.17■□□□□ 0.66
GGPS1-202ENST00000358966 IQGAP2Q13576 1575 aa19.17■□□□□ 0.66
GGPS1-202ENST00000358966 SAMD9Q5K651 1589 aa19.17■□□□□ 0.66
GGPS1-202ENST00000358966 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
GGPS1-202ENST00000358966 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
GGPS1-202ENST00000358966 ITGAEP38570 1179 aa19.12■□□□□ 0.65
GGPS1-202ENST00000358966 MAGI1Q96QZ7 1491 aaPredicted RBP19.11■□□□□ 0.65
GGPS1-202ENST00000358966 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
GGPS1-202ENST00000358966 LRRC9Q6ZRR7 1453 aa19.11■□□□□ 0.65
GGPS1-202ENST00000358966 FMN1Q68DA7 1419 aa19.1■□□□□ 0.65
GGPS1-202ENST00000358966 FYCO1Q9BQS8 1478 aa19.1■□□□□ 0.65
GGPS1-202ENST00000358966 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
GGPS1-202ENST00000358966 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
GGPS1-202ENST00000358966 LRRIQ1Q96JM4 1722 aa19.09■□□□□ 0.65
GGPS1-202ENST00000358966 CFAP43Q8NDM7 1665 aa19.07■□□□□ 0.64
GGPS1-202ENST00000358966 PHLDB1Q86UU1 1377 aa19.06■□□□□ 0.64
GGPS1-202ENST00000358966 KIAA0586Q9BVV6 1533 aa19.05■□□□□ 0.64
GGPS1-202ENST00000358966 DISP1Q96F81 1524 aa19.02■□□□□ 0.64
GGPS1-202ENST00000358966 MAP3K1Q13233 1512 aa19.02■□□□□ 0.63
GGPS1-202ENST00000358966 CCNB3Q8WWL7 1395 aa19.01■□□□□ 0.63
GGPS1-202ENST00000358966 RRBP1Q9P2E9 1410 aaKnown RBP19.01■□□□□ 0.63
GGPS1-202ENST00000358966 UGGT2Q9NYU1 1516 aa19.01■□□□□ 0.63
GGPS1-202ENST00000358966 FAM50AQ14320 339 aaKnown RBP18.98■□□□□ 0.63
GGPS1-202ENST00000358966 KIAA0556O60303 1618 aa18.98■□□□□ 0.63
GGPS1-202ENST00000358966 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
GGPS1-202ENST00000358966 CDK13Q14004 1512 aaKnown RBP18.97■□□□□ 0.63
GGPS1-202ENST00000358966 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
GGPS1-202ENST00000358966 JPH4Q96JJ6 628 aa18.96■□□□□ 0.63
GGPS1-202ENST00000358966 NUP160Q12769 1436 aa18.96■□□□□ 0.63
GGPS1-202ENST00000358966 MAGI3Q5TCQ9 1506 aa18.95■□□□□ 0.62
GGPS1-202ENST00000358966 CHD1O14646 1710 aa18.92■□□□□ 0.62
GGPS1-202ENST00000358966 EPRSP07814 1512 aaKnown RBP18.9■□□□□ 0.62
GGPS1-202ENST00000358966 PLB1Q6P1J6 1458 aa18.89■□□□□ 0.61
GGPS1-202ENST00000358966 HECW1Q76N89 1606 aa18.88■□□□□ 0.61
GGPS1-202ENST00000358966 NCOA2Q15596 1464 aa18.86■□□□□ 0.61
GGPS1-202ENST00000358966 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
GGPS1-202ENST00000358966 CCDC18Q5T9S5 1454 aa18.82■□□□□ 0.6
GGPS1-202ENST00000358966 RAPGEF6Q8TEU7 1601 aa18.81■□□□□ 0.6
GGPS1-202ENST00000358966 FGD6Q6ZV73 1430 aa18.81■□□□□ 0.6
GGPS1-202ENST00000358966 PRG4Q92954 1404 aaPredicted RBP18.81■□□□□ 0.6
GGPS1-202ENST00000358966 EHBP1L1Q8N3D4 1523 aa18.8■□□□□ 0.6
GGPS1-202ENST00000358966 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
GGPS1-202ENST00000358966 SUPT6HQ7KZ85 1726 aaKnown RBP18.79■□□□□ 0.6
GGPS1-202ENST00000358966 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
GGPS1-202ENST00000358966 RAB3GAP2Q9H2M9 1393 aa18.76■□□□□ 0.59
GGPS1-202ENST00000358966 MYOM3Q5VTT5 1437 aa18.76■□□□□ 0.59
GGPS1-202ENST00000358966 DHX57Q6P158 1386 aaKnown RBP18.75■□□□□ 0.59
GGPS1-202ENST00000358966 PTPRKQ15262 1439 aa18.73■□□□□ 0.59
GGPS1-202ENST00000358966 PRKCSHP14314 528 aaPredicted RBP18.72■□□□□ 0.59
GGPS1-202ENST00000358966 ARHGEF11O15085 1522 aa18.71■□□□□ 0.59
GGPS1-202ENST00000358966 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
GGPS1-202ENST00000358966 BCL11AQ9H165 835 aa18.69■□□□□ 0.58
GGPS1-202ENST00000358966 PTPRGP23470 1445 aa18.68■□□□□ 0.58
GGPS1-202ENST00000358966 ZNF644Q9H582 1327 aaPredicted RBP18.68■□□□□ 0.58
GGPS1-202ENST00000358966 PTPN23Q9H3S7 1636 aa18.68■□□□□ 0.58
GGPS1-202ENST00000358966 SETD5Q9C0A6 1442 aa18.67■□□□□ 0.58
GGPS1-202ENST00000358966 ABCA8O94911 1581 aa18.65■□□□□ 0.58
GGPS1-202ENST00000358966 KIF14Q15058 1648 aa18.65■□□□□ 0.58
GGPS1-202ENST00000358966 ATP10BO94823 1461 aa18.63■□□□□ 0.57
GGPS1-202ENST00000358966 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
GGPS1-202ENST00000358966 SHROOM2Q13796 1616 aa18.62■□□□□ 0.57
GGPS1-202ENST00000358966 RRP7BPQ9NSQ0 103 aa18.62■□□□□ 0.57
GGPS1-202ENST00000358966 TROQ12816 1431 aaPredicted RBP18.61■□□□□ 0.57
GGPS1-202ENST00000358966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.6■□□□□ 0.57
GGPS1-202ENST00000358966 ZNF777Q9ULD5 760 aaPredicted RBP18.6■□□□□ 0.57
GGPS1-202ENST00000358966 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
GGPS1-202ENST00000358966 PLEKHD1A6NEE1 506 aa18.57■□□□□ 0.56
GGPS1-202ENST00000358966 MAPKBP1O60336 1514 aa18.55■□□□□ 0.56
GGPS1-202ENST00000358966 TCOF1Q13428 1488 aaKnown RBP18.54■□□□□ 0.56
GGPS1-202ENST00000358966 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
GGPS1-202ENST00000358966 CFDP1Q9UEE9 299 aaPredicted RBP18.54■□□□□ 0.56
GGPS1-202ENST00000358966 UACAQ9BZF9 1416 aa18.54■□□□□ 0.56
GGPS1-202ENST00000358966 NAIPQ13075 1403 aa18.53■□□□□ 0.56
GGPS1-202ENST00000358966 SIN3AQ96ST3 1273 aa18.52■□□□□ 0.56
GGPS1-202ENST00000358966 MIA2Q96PC5 1412 aa18.52■□□□□ 0.56
GGPS1-202ENST00000358966 GPATCH8Q9UKJ3 1502 aaKnown RBP18.52■□□□□ 0.56
GGPS1-202ENST00000358966 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
GGPS1-202ENST00000358966 NEUROD1Q13562 356 aa18.5■□□□□ 0.55
GGPS1-202ENST00000358966 KDM6BO15054 1643 aa18.49■□□□□ 0.55
GGPS1-202ENST00000358966 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms