RNA–Protein interactions for RNA: ENST00000358598.6

PRKAR1A-201, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-201ENST00000358598 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
PRKAR1A-201ENST00000358598 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
PRKAR1A-201ENST00000358598 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
PRKAR1A-201ENST00000358598 PDS5BQ9NTI5 1447 aa15.88■□□□□ 0.13
PRKAR1A-201ENST00000358598 FBLN2P98095 1184 aa15.87■□□□□ 0.13
PRKAR1A-201ENST00000358598 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
PRKAR1A-201ENST00000358598 SIN3AQ96ST3 1273 aa15.84■□□□□ 0.13
PRKAR1A-201ENST00000358598 RAB3GAP2Q9H2M9 1393 aa15.84■□□□□ 0.13
PRKAR1A-201ENST00000358598 PHLDB1Q86UU1 1377 aa15.82■□□□□ 0.12
PRKAR1A-201ENST00000358598 CLSPNQ9HAW4 1339 aa15.81■□□□□ 0.12
PRKAR1A-201ENST00000358598 CHIC2Q9UKJ5 165 aa15.81■□□□□ 0.12
PRKAR1A-201ENST00000358598 RRBP1Q9P2E9 1410 aaKnown RBP15.81■□□□□ 0.12
PRKAR1A-201ENST00000358598 DNMBPQ6XZF7 1577 aa15.8■□□□□ 0.12
PRKAR1A-201ENST00000358598 HIRIP3Q9BW71 556 aaPredicted RBP15.78■□□□□ 0.12
PRKAR1A-201ENST00000358598 ABCA10Q8WWZ4 1543 aa15.77■□□□□ 0.12
PRKAR1A-201ENST00000358598 TRIM52Q96A61 297 aa15.77■□□□□ 0.12
PRKAR1A-201ENST00000358598 GAPVD1Q14C86 1478 aa15.77■□□□□ 0.11
PRKAR1A-201ENST00000358598 LRRC9Q6ZRR7 1453 aa15.77■□□□□ 0.11
PRKAR1A-201ENST00000358598 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
PRKAR1A-201ENST00000358598 SETD5Q9C0A6 1442 aa15.75■□□□□ 0.11
PRKAR1A-201ENST00000358598 RRP7BPQ9NSQ0 103 aa15.73■□□□□ 0.11
PRKAR1A-201ENST00000358598 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
PRKAR1A-201ENST00000358598 TIAM1Q13009 1591 aa15.72■□□□□ 0.11
PRKAR1A-201ENST00000358598 AQRO60306 1485 aaKnown RBP eCLIP15.72■□□□□ 0.111e-6■■■■□ 26.2
PRKAR1A-201ENST00000358598 DDX10Q13206 875 aaKnown RBP15.7■□□□□ 0.1
PRKAR1A-201ENST00000358598 PRDM2Q13029 1718 aa15.69■□□□□ 0.1
PRKAR1A-201ENST00000358598 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
PRKAR1A-201ENST00000358598 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
PRKAR1A-201ENST00000358598 PCF11O94913 1555 aaKnown RBP15.67■□□□□ 0.1
PRKAR1A-201ENST00000358598 CASKIN1Q8WXD9 1431 aa15.66■□□□□ 0.1
PRKAR1A-201ENST00000358598 TONSLQ96HA7 1378 aa15.64■□□□□ 0.09
PRKAR1A-201ENST00000358598 ZNF777Q9ULD5 760 aaPredicted RBP15.64■□□□□ 0.09
PRKAR1A-201ENST00000358598 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
PRKAR1A-201ENST00000358598 FYCO1Q9BQS8 1478 aa15.61■□□□□ 0.09
PRKAR1A-201ENST00000358598 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
PRKAR1A-201ENST00000358598 FGD6Q6ZV73 1430 aa15.58■□□□□ 0.08
PRKAR1A-201ENST00000358598 CDK11AQ9UQ88 783 aaPredicted RBP15.57■□□□□ 0.08
PRKAR1A-201ENST00000358598 MAP3K1Q13233 1512 aa15.56■□□□□ 0.08
PRKAR1A-201ENST00000358598 CUL7Q14999 1698 aa15.56■□□□□ 0.08
PRKAR1A-201ENST00000358598 FOXD1Q16676 465 aa15.53■□□□□ 0.08
PRKAR1A-201ENST00000358598 NCOA2Q15596 1464 aa15.53■□□□□ 0.08
PRKAR1A-201ENST00000358598 CNGB1Q14028 1251 aaPredicted RBP15.52■□□□□ 0.08
PRKAR1A-201ENST00000358598 KCNH8Q96L42 1107 aa15.52■□□□□ 0.08
PRKAR1A-201ENST00000358598 PPP1R15AO75807 674 aaPredicted RBP15.51■□□□□ 0.07
PRKAR1A-201ENST00000358598 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
PRKAR1A-201ENST00000358598 ANP32CO43423 234 aa15.5■□□□□ 0.07
PRKAR1A-201ENST00000358598 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
PRKAR1A-201ENST00000358598 ZNF608Q9ULD9 1512 aaPredicted RBP15.5■□□□□ 0.07
PRKAR1A-201ENST00000358598 MYOM3Q5VTT5 1437 aa15.49■□□□□ 0.07
PRKAR1A-201ENST00000358598 POLR3GLQ9BT43 218 aa15.49■□□□□ 0.07
PRKAR1A-201ENST00000358598 GRIN2BQ13224 1484 aa15.49■□□□□ 0.07
PRKAR1A-201ENST00000358598 ZNF326Q5BKZ1 582 aaKnown RBP15.48■□□□□ 0.07
PRKAR1A-201ENST00000358598 CCDC18Q5T9S5 1454 aa15.48■□□□□ 0.07
PRKAR1A-201ENST00000358598 PELP1Q8IZL8 1130 aaKnown RBP15.48■□□□□ 0.07
PRKAR1A-201ENST00000358598 CFDP1Q9UEE9 299 aaPredicted RBP15.46■□□□□ 0.07
PRKAR1A-201ENST00000358598 ZNF644Q9H582 1327 aaPredicted RBP15.46■□□□□ 0.07
PRKAR1A-201ENST00000358598 MAPKBP1O60336 1514 aa15.45■□□□□ 0.06
PRKAR1A-201ENST00000358598 SNAPC4Q5SXM2 1469 aa15.45■□□□□ 0.06
PRKAR1A-201ENST00000358598 TIMELESSQ9UNS1 1208 aa15.45■□□□□ 0.06
PRKAR1A-201ENST00000358598 SLC4A1APQ9BWU0 796 aaKnown RBP15.44■□□□□ 0.06
PRKAR1A-201ENST00000358598 PTPRKQ15262 1439 aa15.44■□□□□ 0.06
PRKAR1A-201ENST00000358598 CTTNBP2Q8WZ74 1663 aa15.44■□□□□ 0.06
PRKAR1A-201ENST00000358598 ABCA5Q8WWZ7 1642 aa15.43■□□□□ 0.06
PRKAR1A-201ENST00000358598 CDK13Q14004 1512 aaKnown RBP15.42■□□□□ 0.06
PRKAR1A-201ENST00000358598 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
PRKAR1A-201ENST00000358598 BCANQ96GW7 911 aa15.42■□□□□ 0.06
PRKAR1A-201ENST00000358598 MPHOSPH9Q99550 1183 aa15.41■□□□□ 0.06
PRKAR1A-201ENST00000358598 WDR97A6NE52 1622 aa15.41■□□□□ 0.06
PRKAR1A-201ENST00000358598 CFAP43Q8NDM7 1665 aa15.41■□□□□ 0.06
PRKAR1A-201ENST00000358598 PLEKHD1A6NEE1 506 aa15.4■□□□□ 0.06
PRKAR1A-201ENST00000358598 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
PRKAR1A-201ENST00000358598 IQGAP2Q13576 1575 aa15.39■□□□□ 0.05
PRKAR1A-201ENST00000358598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRKAR1A-201ENST00000358598 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
PRKAR1A-201ENST00000358598 NAIPQ13075 1403 aa15.38■□□□□ 0.05
PRKAR1A-201ENST00000358598 UACAQ9BZF9 1416 aa15.38■□□□□ 0.05
PRKAR1A-201ENST00000358598 EPRSP07814 1512 aaKnown RBP15.38■□□□□ 0.05
PRKAR1A-201ENST00000358598 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
PRKAR1A-201ENST00000358598 TARBP1Q13395 1621 aaKnown RBP15.36■□□□□ 0.05
PRKAR1A-201ENST00000358598 NEFLP07196 543 aa15.34■□□□□ 0.05
PRKAR1A-201ENST00000358598 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRKAR1A-201ENST00000358598 L3MBTL2Q969R5 705 aa15.34■□□□□ 0.05
PRKAR1A-201ENST00000358598 SUPT6HQ7KZ85 1726 aaKnown RBP15.33■□□□□ 0.04
PRKAR1A-201ENST00000358598 SAMD9Q5K651 1589 aa15.32■□□□□ 0.04
PRKAR1A-201ENST00000358598 HSPA5P11021 654 aaKnown RBP15.32■□□□□ 0.04
PRKAR1A-201ENST00000358598 KIAA0586Q9BVV6 1533 aa15.31■□□□□ 0.04
PRKAR1A-201ENST00000358598 CARMIL2Q6F5E8 1435 aa15.31■□□□□ 0.04
PRKAR1A-201ENST00000358598 TSPY4P0CV99 314 aa15.31■□□□□ 0.04
PRKAR1A-201ENST00000358598 TSPY10P0CW01 314 aa15.31■□□□□ 0.04
PRKAR1A-201ENST00000358598 HECW1Q76N89 1606 aa15.3■□□□□ 0.04
PRKAR1A-201ENST00000358598 PRG4Q92954 1404 aaPredicted RBP15.3■□□□□ 0.04
PRKAR1A-201ENST00000358598 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
PRKAR1A-201ENST00000358598 ADAMTS12P58397 1594 aa15.29■□□□□ 0.04
PRKAR1A-201ENST00000358598 PTPN23Q9H3S7 1636 aa15.29■□□□□ 0.04
PRKAR1A-201ENST00000358598 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
PRKAR1A-201ENST00000358598 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
PRKAR1A-201ENST00000358598 FKBP8Q14318 412 aa15.27■□□□□ 0.04
PRKAR1A-201ENST00000358598 KDM2AQ9Y2K7 1162 aa15.27■□□□□ 0.03
PRKAR1A-201ENST00000358598 HNRNPUQ00839 825 aaKnown RBP eCLIP15.26■□□□□ 0.03
PRKAR1A-201ENST00000358598 SUPT16HQ9Y5B9 1047 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms