RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 JPH4Q96JJ6 628 aa40.12■■■■■ 4.01
ALKAL1-201ENST00000358543 SHROOM2Q13796 1616 aa40.12■■■■■ 4.01
ALKAL1-201ENST00000358543 KIF21BO75037 1637 aa40.09■■■■■ 4.01
ALKAL1-201ENST00000358543 RIMBP3CA6NJZ7 1639 aa40.07■■■■■ 4.01
ALKAL1-201ENST00000358543 RIMBP3BA6NNM3 1639 aa40.07■■■■■ 4.01
ALKAL1-201ENST00000358543 RIMBP3Q9UFD9 1639 aa40.07■■■■■ 4.01
ALKAL1-201ENST00000358543 IQGAP2Q13576 1575 aa40■■■■□ 3.99
ALKAL1-201ENST00000358543 PRG4Q92954 1404 aaPredicted RBP39.96■■■■□ 3.99
ALKAL1-201ENST00000358543 CTTNBP2Q8WZ74 1663 aa39.94■■■■□ 3.98
ALKAL1-201ENST00000358543 GOLGA3Q08378 1498 aa39.88■■■■□ 3.98
ALKAL1-201ENST00000358543 ERCC6L2Q5T890 1561 aa39.88■■■■□ 3.97
ALKAL1-201ENST00000358543 UGGT2Q9NYU1 1516 aa39.85■■■■□ 3.97
ALKAL1-201ENST00000358543 ARAP1Q96P48 1450 aa39.84■■■■□ 3.97
ALKAL1-201ENST00000358543 CARMIL2Q6F5E8 1435 aa39.78■■■■□ 3.96
ALKAL1-201ENST00000358543 UBTFP17480 764 aaKnown RBP39.77■■■■□ 3.96
ALKAL1-201ENST00000358543 CYB5RLQ6IPT4 315 aa39.77■■■■□ 3.96
ALKAL1-201ENST00000358543 EHMT2Q96KQ7 1210 aa39.73■■■■□ 3.95
ALKAL1-201ENST00000358543 DISP1Q96F81 1524 aa39.72■■■■□ 3.95
ALKAL1-201ENST00000358543 TNIKQ9UKE5 1360 aa39.63■■■■□ 3.93
ALKAL1-201ENST00000358543 KIAA0556O60303 1618 aa39.62■■■■□ 3.93
ALKAL1-201ENST00000358543 PTPRGP23470 1445 aa39.57■■■■□ 3.92
ALKAL1-201ENST00000358543 SAMD9Q5K651 1589 aa39.5■■■■□ 3.91
ALKAL1-201ENST00000358543 RANGAP1P46060 587 aaPredicted RBP39.45■■■■□ 3.91
ALKAL1-201ENST00000358543 EFCAB5A4FU69 1503 aa39.43■■■■□ 3.9
ALKAL1-201ENST00000358543 P3H3Q8IVL6 736 aa39.4■■■■□ 3.9
ALKAL1-201ENST00000358543 TTBK1Q5TCY1 1321 aaPredicted RBP39.4■■■■□ 3.9
ALKAL1-201ENST00000358543 LOC105371045A0A1W2PR82 267 aa39.36■■■■□ 3.89
ALKAL1-201ENST00000358543 UACAQ9BZF9 1416 aa39.31■■■■□ 3.88
ALKAL1-201ENST00000358543 ARHGAP35Q9NRY4 1499 aa39.29■■■■□ 3.88
ALKAL1-201ENST00000358543 UHRF1BP1LA0JNW5 1464 aa39.27■■■■□ 3.88
ALKAL1-201ENST00000358543 FHOD3Q2V2M9 1422 aa39.27■■■■□ 3.88
ALKAL1-201ENST00000358543 ADCY10Q96PN6 1610 aa39.25■■■■□ 3.87
ALKAL1-201ENST00000358543 ABCC2Q92887 1545 aa39.2■■■■□ 3.87
ALKAL1-201ENST00000358543 PLB1Q6P1J6 1458 aa39.19■■■■□ 3.86
ALKAL1-201ENST00000358543 ABCA8O94911 1581 aa39.18■■■■□ 3.86
ALKAL1-201ENST00000358543 CLIP1P30622 1438 aa39.18■■■■□ 3.86
ALKAL1-201ENST00000358543 NPM1P06748 294 aaKnown RBP eCLIP39.17■■■■□ 3.86
ALKAL1-201ENST00000358543 CEP162Q5TB80 1403 aa39.09■■■■□ 3.85
ALKAL1-201ENST00000358543 FMN1Q68DA7 1419 aa39.08■■■■□ 3.85
ALKAL1-201ENST00000358543 KDM5BQ9UGL1 1544 aa39.06■■■■□ 3.84
ALKAL1-201ENST00000358543 RAPGEF6Q8TEU7 1601 aa39.03■■■■□ 3.84
ALKAL1-201ENST00000358543 MAPKBP1O60336 1514 aa38.99■■■■□ 3.83
ALKAL1-201ENST00000358543 ZCCHC11Q5TAX3 1644 aaKnown RBP38.92■■■■□ 3.82
ALKAL1-201ENST00000358543 NUP153P49790 1475 aaKnown RBP38.92■■■■□ 3.82
ALKAL1-201ENST00000358543 ATP10BO94823 1461 aa38.88■■■■□ 3.81
ALKAL1-201ENST00000358543 ASXL2Q76L83 1435 aa38.83■■■■□ 3.81
ALKAL1-201ENST00000358543 CASKIN1Q8WXD9 1431 aa38.82■■■■□ 3.81
ALKAL1-201ENST00000358543 ARID3CA6NKF2 412 aa38.8■■■■□ 3.8
ALKAL1-201ENST00000358543 TRHP20396 242 aaPredicted RBP38.8■■■■□ 3.8
ALKAL1-201ENST00000358543 HECW1Q76N89 1606 aa38.79■■■■□ 3.8
ALKAL1-201ENST00000358543 ABCC10Q5T3U5 1492 aa38.76■■■■□ 3.8
ALKAL1-201ENST00000358543 ATP1B4Q9UN42 357 aaPredicted RBP38.75■■■■□ 3.79
ALKAL1-201ENST00000358543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.73■■■■□ 3.79
ALKAL1-201ENST00000358543 HNRNPUL2Q1KMD3 747 aaKnown RBP38.73■■■■□ 3.79
ALKAL1-201ENST00000358543 PCF11O94913 1555 aaKnown RBP38.72■■■■□ 3.79
ALKAL1-201ENST00000358543 EPRSP07814 1512 aaKnown RBP38.72■■■■□ 3.79
ALKAL1-201ENST00000358543 FYCO1Q9BQS8 1478 aa38.72■■■■□ 3.79
ALKAL1-201ENST00000358543 WDR7Q9Y4E6 1490 aa38.71■■■■□ 3.79
ALKAL1-201ENST00000358543 FAM69CQ0P6D2 419 aa38.66■■■■□ 3.78
ALKAL1-201ENST00000358543 DIP2BQ9P265 1576 aa38.65■■■■□ 3.78
ALKAL1-201ENST00000358543 CDK13Q14004 1512 aaKnown RBP38.63■■■■□ 3.78
ALKAL1-201ENST00000358543 PLEKHD1A6NEE1 506 aa38.63■■■■□ 3.77
ALKAL1-201ENST00000358543 VPS8Q8N3P4 1428 aa38.63■■■■□ 3.77
ALKAL1-201ENST00000358543 KIF13AQ9H1H9 1805 aa38.61■■■■□ 3.77
ALKAL1-201ENST00000358543 CCDC18Q5T9S5 1454 aa38.6■■■■□ 3.77
ALKAL1-201ENST00000358543 GLI2P10070 1586 aa38.58■■■■□ 3.77
ALKAL1-201ENST00000358543 CDK11AQ9UQ88 783 aaPredicted RBP38.58■■■■□ 3.77
ALKAL1-201ENST00000358543 LRRIQ1Q96JM4 1722 aa38.57■■■■□ 3.76
ALKAL1-201ENST00000358543 KCNH8Q96L42 1107 aa38.54■■■■□ 3.76
ALKAL1-201ENST00000358543 TROQ12816 1431 aaPredicted RBP38.4■■■■□ 3.74
ALKAL1-201ENST00000358543 MAP3K4Q9Y6R4 1608 aa38.38■■■■□ 3.73
ALKAL1-201ENST00000358543 ABCA9Q8IUA7 1624 aa38.34■■■■□ 3.73
ALKAL1-201ENST00000358543 CFAP43Q8NDM7 1665 aa38.34■■■■□ 3.73
ALKAL1-201ENST00000358543 CD109Q6YHK3 1445 aa38.33■■■■□ 3.73
ALKAL1-201ENST00000358543 MAGI3Q5TCQ9 1506 aa38.31■■■■□ 3.72
ALKAL1-201ENST00000358543 MAP3K1Q13233 1512 aa38.28■■■■□ 3.72
ALKAL1-201ENST00000358543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.27■■■■□ 3.72
ALKAL1-201ENST00000358543 TSPOAP1O95153 1857 aa38.26■■■■□ 3.72
ALKAL1-201ENST00000358543 TIAM1Q13009 1591 aa38.25■■■■□ 3.71
ALKAL1-201ENST00000358543 KIF14Q15058 1648 aa38.23■■■■□ 3.71
ALKAL1-201ENST00000358543 MTUS2Q5JR59 1369 aa38.23■■■■□ 3.71
ALKAL1-201ENST00000358543 PPRC1Q5VV67 1664 aaKnown RBP38.23■■■■□ 3.71
ALKAL1-201ENST00000358543 TEX14Q8IWB6 1497 aa38.21■■■■□ 3.71
ALKAL1-201ENST00000358543 APLP2Q06481 763 aa38.2■■■■□ 3.71
ALKAL1-201ENST00000358543 TTC37Q6PGP7 1564 aa38.17■■■■□ 3.7
ALKAL1-201ENST00000358543 EHBP1L1Q8N3D4 1523 aa38.17■■■■□ 3.7
ALKAL1-201ENST00000358543 LRRC9Q6ZRR7 1453 aa38.12■■■■□ 3.69
ALKAL1-201ENST00000358543 PLCH2O75038 1416 aa38.1■■■■□ 3.69
ALKAL1-201ENST00000358543 KANK4Q5T7N3 995 aaPredicted RBP38.07■■■■□ 3.68
ALKAL1-201ENST00000358543 PHLDB1Q86UU1 1377 aa38.06■■■■□ 3.68
ALKAL1-201ENST00000358543 ARAP3Q8WWN8 1544 aa38.04■■■■□ 3.68
ALKAL1-201ENST00000358543 NEO1Q92859 1461 aa38.03■■■■□ 3.68
ALKAL1-201ENST00000358543 MYO5CQ9NQX4 1742 aa38.02■■■■□ 3.68
ALKAL1-201ENST00000358543 FANCAO15360 1455 aa37.98■■■■□ 3.67
ALKAL1-201ENST00000358543 SUPT6HQ7KZ85 1726 aaKnown RBP37.98■■■■□ 3.67
ALKAL1-201ENST00000358543 EFCAB2Q5VUJ9 269 aa37.97■■■■□ 3.67
ALKAL1-201ENST00000358543 GPATCH8Q9UKJ3 1502 aaKnown RBP37.95■■■■□ 3.67
ALKAL1-201ENST00000358543 NCOA2Q15596 1464 aa37.95■■■■□ 3.67
ALKAL1-201ENST00000358543 CCNB3Q8WWL7 1395 aa37.94■■■■□ 3.66
ALKAL1-201ENST00000358543 CFAP74Q9C0B2 1584 aa37.93■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms