RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 NEUROD1Q13562 356 aa23.9■■□□□ 1.42
PTPN5-201ENST00000358540 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
PTPN5-201ENST00000358540 WDR97A6NE52 1622 aa23.89■■□□□ 1.41
PTPN5-201ENST00000358540 CUL7Q14999 1698 aa23.86■■□□□ 1.41
PTPN5-201ENST00000358540 ABCA5Q8WWZ7 1642 aa23.84■■□□□ 1.41
PTPN5-201ENST00000358540 TIAM1Q13009 1591 aa23.81■■□□□ 1.4
PTPN5-201ENST00000358540 GTF3C3Q9Y5Q9 886 aa23.81■■□□□ 1.4
PTPN5-201ENST00000358540 PCF11O94913 1555 aaKnown RBP23.8■■□□□ 1.4
PTPN5-201ENST00000358540 RRBP1Q9P2E9 1410 aaKnown RBP23.8■■□□□ 1.4
PTPN5-201ENST00000358540 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
PTPN5-201ENST00000358540 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
PTPN5-201ENST00000358540 AQRO60306 1485 aaKnown RBP eCLIP23.77■■□□□ 1.4
PTPN5-201ENST00000358540 TARBP1Q13395 1621 aaKnown RBP23.76■■□□□ 1.39
PTPN5-201ENST00000358540 CTTNBP2Q8WZ74 1663 aa23.75■■□□□ 1.39
PTPN5-201ENST00000358540 LRRC9Q6ZRR7 1453 aa23.74■■□□□ 1.39
PTPN5-201ENST00000358540 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
PTPN5-201ENST00000358540 PHLDB1Q86UU1 1377 aa23.71■■□□□ 1.39
PTPN5-201ENST00000358540 EFCAB5A4FU69 1503 aa23.7■■□□□ 1.38
PTPN5-201ENST00000358540 FAM50AQ14320 339 aaKnown RBP23.68■■□□□ 1.38
PTPN5-201ENST00000358540 MAP3K1Q13233 1512 aa23.67■■□□□ 1.38
PTPN5-201ENST00000358540 DHX57Q6P158 1386 aaKnown RBP23.66■■□□□ 1.38
PTPN5-201ENST00000358540 DIEXFQ68CQ4 756 aaKnown RBP23.65■■□□□ 1.38
PTPN5-201ENST00000358540 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.38
PTPN5-201ENST00000358540 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.38
PTPN5-201ENST00000358540 CASKIN1Q8WXD9 1431 aa23.64■■□□□ 1.38
PTPN5-201ENST00000358540 FYCO1Q9BQS8 1478 aa23.63■■□□□ 1.37
PTPN5-201ENST00000358540 CFAP43Q8NDM7 1665 aa23.61■■□□□ 1.37
PTPN5-201ENST00000358540 FMN1Q68DA7 1419 aa23.6■■□□□ 1.37
PTPN5-201ENST00000358540 PBRM1Q86U86 1689 aa23.59■■□□□ 1.37
PTPN5-201ENST00000358540 ERCC6Q03468 1493 aa23.59■■□□□ 1.37
PTPN5-201ENST00000358540 ZNF316A6NFI3 1004 aaPredicted RBP23.59■■□□□ 1.37
PTPN5-201ENST00000358540 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
PTPN5-201ENST00000358540 SAMD9Q5K651 1589 aa23.55■■□□□ 1.36
PTPN5-201ENST00000358540 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
PTPN5-201ENST00000358540 ARID3CA6NKF2 412 aa23.54■■□□□ 1.36
PTPN5-201ENST00000358540 RAB3GAP2Q9H2M9 1393 aa23.52■■□□□ 1.36
PTPN5-201ENST00000358540 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
PTPN5-201ENST00000358540 IFT140Q96RY7 1462 aa23.52■■□□□ 1.36
PTPN5-201ENST00000358540 MTUS2Q5JR59 1369 aa23.52■■□□□ 1.36
PTPN5-201ENST00000358540 WDR62O43379 1518 aa23.52■■□□□ 1.36
PTPN5-201ENST00000358540 IQGAP2Q13576 1575 aa23.44■■□□□ 1.34
PTPN5-201ENST00000358540 LRRIQ1Q96JM4 1722 aa23.43■■□□□ 1.34
PTPN5-201ENST00000358540 CLSPNQ9HAW4 1339 aa23.43■■□□□ 1.34
PTPN5-201ENST00000358540 SETD5Q9C0A6 1442 aa23.42■■□□□ 1.34
PTPN5-201ENST00000358540 FBLN2P98095 1184 aa23.41■■□□□ 1.34
PTPN5-201ENST00000358540 EIF4G3O43432 1585 aaKnown RBP23.38■■□□□ 1.33
PTPN5-201ENST00000358540 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
PTPN5-201ENST00000358540 NCOA2Q15596 1464 aa23.35■■□□□ 1.33
PTPN5-201ENST00000358540 THOC2Q8NI27 1593 aaKnown RBP23.33■■□□□ 1.33
PTPN5-201ENST00000358540 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.33
PTPN5-201ENST00000358540 MAGI3Q5TCQ9 1506 aa23.33■■□□□ 1.32
PTPN5-201ENST00000358540 CDK13Q14004 1512 aaKnown RBP23.31■■□□□ 1.32
PTPN5-201ENST00000358540 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
PTPN5-201ENST00000358540 MAPKBP1O60336 1514 aa23.3■■□□□ 1.32
PTPN5-201ENST00000358540 SIN3AQ96ST3 1273 aa23.28■■□□□ 1.32
PTPN5-201ENST00000358540 PTPRKQ15262 1439 aa23.27■■□□□ 1.32
PTPN5-201ENST00000358540 MYOM3Q5VTT5 1437 aa23.27■■□□□ 1.32
PTPN5-201ENST00000358540 YTHDC1Q96MU7 727 aaKnown RBP23.27■■□□□ 1.32
PTPN5-201ENST00000358540 KIAA0586Q9BVV6 1533 aa23.27■■□□□ 1.32
PTPN5-201ENST00000358540 EHBP1L1Q8N3D4 1523 aa23.26■■□□□ 1.31
PTPN5-201ENST00000358540 EPRSP07814 1512 aaKnown RBP23.26■■□□□ 1.31
PTPN5-201ENST00000358540 UGGT2Q9NYU1 1516 aa23.26■■□□□ 1.31
PTPN5-201ENST00000358540 HECW1Q76N89 1606 aa23.25■■□□□ 1.31
PTPN5-201ENST00000358540 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
PTPN5-201ENST00000358540 SUPT6HQ7KZ85 1726 aaKnown RBP23.24■■□□□ 1.31
PTPN5-201ENST00000358540 MIER1Q8N108 512 aa23.24■■□□□ 1.31
PTPN5-201ENST00000358540 DISP1Q96F81 1524 aa23.23■■□□□ 1.31
PTPN5-201ENST00000358540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.23■■□□□ 1.31
PTPN5-201ENST00000358540 CHIC2Q9UKJ5 165 aa23.21■■□□□ 1.31
PTPN5-201ENST00000358540 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
PTPN5-201ENST00000358540 MAGI1Q96QZ7 1491 aaPredicted RBP23.19■■□□□ 1.3
PTPN5-201ENST00000358540 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
PTPN5-201ENST00000358540 CEP170Q5SW79 1584 aa23.16■■□□□ 1.3
PTPN5-201ENST00000358540 RRP7BPQ9NSQ0 103 aa23.16■■□□□ 1.3
PTPN5-201ENST00000358540 PTPN23Q9H3S7 1636 aa23.14■■□□□ 1.3
PTPN5-201ENST00000358540 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
PTPN5-201ENST00000358540 NUP153P49790 1475 aaKnown RBP23.11■■□□□ 1.29
PTPN5-201ENST00000358540 JPH4Q96JJ6 628 aa23.1■■□□□ 1.29
PTPN5-201ENST00000358540 HFM1A2PYH4 1435 aa23.1■■□□□ 1.29
PTPN5-201ENST00000358540 NAIPQ13075 1403 aa23.09■■□□□ 1.29
PTPN5-201ENST00000358540 PLB1Q6P1J6 1458 aa23.08■■□□□ 1.28
PTPN5-201ENST00000358540 RAPGEF6Q8TEU7 1601 aa23.05■■□□□ 1.28
PTPN5-201ENST00000358540 ZNF644Q9H582 1327 aaPredicted RBP23.04■■□□□ 1.28
PTPN5-201ENST00000358540 NUP160Q12769 1436 aa23.02■■□□□ 1.28
PTPN5-201ENST00000358540 PRG4Q92954 1404 aaPredicted RBP23.01■■□□□ 1.27
PTPN5-201ENST00000358540 TCOF1Q13428 1488 aaKnown RBP23.01■■□□□ 1.27
PTPN5-201ENST00000358540 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
PTPN5-201ENST00000358540 UACAQ9BZF9 1416 aa22.99■■□□□ 1.27
PTPN5-201ENST00000358540 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
PTPN5-201ENST00000358540 CARMIL2Q6F5E8 1435 aa22.98■■□□□ 1.27
PTPN5-201ENST00000358540 HIRIP3Q9BW71 556 aaPredicted RBP22.97■■□□□ 1.27
PTPN5-201ENST00000358540 MIA2Q96PC5 1412 aa22.96■■□□□ 1.27
PTPN5-201ENST00000358540 ZNF777Q9ULD5 760 aaPredicted RBP22.94■■□□□ 1.26
PTPN5-201ENST00000358540 KDM6BO15054 1643 aa22.92■■□□□ 1.26
PTPN5-201ENST00000358540 TONSLQ96HA7 1378 aa22.92■■□□□ 1.26
PTPN5-201ENST00000358540 PPP1R15AO75807 674 aaPredicted RBP22.91■■□□□ 1.26
PTPN5-201ENST00000358540 TROQ12816 1431 aaPredicted RBP22.9■■□□□ 1.26
PTPN5-201ENST00000358540 CFDP1Q9UEE9 299 aaPredicted RBP22.89■■□□□ 1.25
PTPN5-201ENST00000358540 FOXD1Q16676 465 aa22.88■■□□□ 1.25
PTPN5-201ENST00000358540 DAPK1P53355 1430 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms