RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.24□□□□□ -0.93
CX3CR1-201ENST00000358309 ZNF644Q9H582 1327 aaPredicted RBP9.22□□□□□ -0.93
CX3CR1-201ENST00000358309 CFTRP13569 1480 aa9.22□□□□□ -0.93
CX3CR1-201ENST00000358309 ZNF608Q9ULD9 1512 aaPredicted RBP9.21□□□□□ -0.94
CX3CR1-201ENST00000358309 CEP164Q9UPV0 1460 aa9.2□□□□□ -0.94
CX3CR1-201ENST00000358309 MTUS2Q5JR59 1369 aa9.17□□□□□ -0.94
CX3CR1-201ENST00000358309 POLA1P09884 1462 aaPredicted RBP9.17□□□□□ -0.94
CX3CR1-201ENST00000358309 ARAP1Q96P48 1450 aa9.16□□□□□ -0.94
CX3CR1-201ENST00000358309 DIEXFQ68CQ4 756 aaKnown RBP9.16□□□□□ -0.94
CX3CR1-201ENST00000358309 KDM2AQ9Y2K7 1162 aa9.15□□□□□ -0.94
CX3CR1-201ENST00000358309 BIVM-ERCC5R4GMW8 1640 aa9.15□□□□□ -0.94
CX3CR1-201ENST00000358309 SLC24A1O60721 1099 aa9.15□□□□□ -0.95
CX3CR1-201ENST00000358309 PELP1Q8IZL8 1130 aaKnown RBP9.14□□□□□ -0.95
CX3CR1-201ENST00000358309 URB2Q14146 1524 aaKnown RBP9.14□□□□□ -0.95
CX3CR1-201ENST00000358309 JPH4Q96JJ6 628 aa9.14□□□□□ -0.95
CX3CR1-201ENST00000358309 CYB5RLQ6IPT4 315 aa9.14□□□□□ -0.95
CX3CR1-201ENST00000358309 TOPBP1Q92547 1522 aa9.13□□□□□ -0.95
CX3CR1-201ENST00000358309 MYT1Q01538 1121 aa9.12□□□□□ -0.95
CX3CR1-201ENST00000358309 RGL3Q3MIN7 710 aa9.12□□□□□ -0.95
CX3CR1-201ENST00000358309 TOP2BQ02880 1626 aa9.1□□□□□ -0.95
CX3CR1-201ENST00000358309 HNRNPMP52272 730 aaKnown RBP eCLIP9.1□□□□□ -0.95
CX3CR1-201ENST00000358309 GAPVD1Q14C86 1478 aa9.1□□□□□ -0.95
CX3CR1-201ENST00000358309 VPS8Q8N3P4 1428 aa9.1□□□□□ -0.95
CX3CR1-201ENST00000358309 DDX10Q13206 875 aaKnown RBP9.09□□□□□ -0.95
CX3CR1-201ENST00000358309 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
CX3CR1-201ENST00000358309 MIER1Q8N108 512 aa9.08□□□□□ -0.96
CX3CR1-201ENST00000358309 CHGAP10645 457 aaKnown RBP9.07□□□□□ -0.96
CX3CR1-201ENST00000358309 CFDP1Q9UEE9 299 aaPredicted RBP9.07□□□□□ -0.96
CX3CR1-201ENST00000358309 PHLDB1Q86UU1 1377 aa9.07□□□□□ -0.96
CX3CR1-201ENST00000358309 KIF21BO75037 1637 aa9.06□□□□□ -0.96
CX3CR1-201ENST00000358309 MLECQ14165 292 aa9.06□□□□□ -0.96
CX3CR1-201ENST00000358309 NUTM2DQ5VT03 806 aaPredicted RBP9.06□□□□□ -0.96
CX3CR1-201ENST00000358309 ARHGAP35Q9NRY4 1499 aa9.06□□□□□ -0.96
CX3CR1-201ENST00000358309 ZEB1P37275 1124 aaPredicted RBP9.06□□□□□ -0.96
CX3CR1-201ENST00000358309 EEA1Q15075 1411 aa9.06□□□□□ -0.96
CX3CR1-201ENST00000358309 PLEKHD1A6NEE1 506 aa9.03□□□□□ -0.96
CX3CR1-201ENST00000358309 SLC4A1APQ9BWU0 796 aaKnown RBP9.02□□□□□ -0.96
CX3CR1-201ENST00000358309 PRXQ9BXM0 1461 aa9.02□□□□□ -0.97
CX3CR1-201ENST00000358309 BCANQ96GW7 911 aa9.02□□□□□ -0.97
CX3CR1-201ENST00000358309 SALL2Q9Y467 1007 aaPredicted RBP9.02□□□□□ -0.97
CX3CR1-201ENST00000358309 CCNB3Q8WWL7 1395 aa9.02□□□□□ -0.97
CX3CR1-201ENST00000358309 SNAPC4Q5SXM2 1469 aa9□□□□□ -0.97
CX3CR1-201ENST00000358309 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
CX3CR1-201ENST00000358309 RAB3GAP2Q9H2M9 1393 aa8.99□□□□□ -0.97
CX3CR1-201ENST00000358309 LAMC3Q9Y6N6 1575 aa8.98□□□□□ -0.97
CX3CR1-201ENST00000358309 TRHP20396 242 aaPredicted RBP8.98□□□□□ -0.97
CX3CR1-201ENST00000358309 CDK13Q14004 1512 aaKnown RBP8.97□□□□□ -0.97
CX3CR1-201ENST00000358309 KIF21AQ7Z4S6 1674 aa8.97□□□□□ -0.97
CX3CR1-201ENST00000358309 AFAP1Q8N556 730 aa8.96□□□□□ -0.97
CX3CR1-201ENST00000358309 SCAF1Q9H7N4 1312 aaKnown RBP8.96□□□□□ -0.97
CX3CR1-201ENST00000358309 PRG4Q92954 1404 aaPredicted RBP8.96□□□□□ -0.97
CX3CR1-201ENST00000358309 CDK11AQ9UQ88 783 aaPredicted RBP8.96□□□□□ -0.98
CX3CR1-201ENST00000358309 PLB1Q6P1J6 1458 aa8.96□□□□□ -0.98
CX3CR1-201ENST00000358309 GGT6Q6P531 493 aa8.95□□□□□ -0.98
CX3CR1-201ENST00000358309 NPM1P06748 294 aaKnown RBP eCLIP8.94□□□□□ -0.98
CX3CR1-201ENST00000358309 MRC2Q9UBG0 1479 aa8.94□□□□□ -0.98
CX3CR1-201ENST00000358309 TSPY4P0CV99 314 aa8.94□□□□□ -0.98
CX3CR1-201ENST00000358309 TSPY10P0CW01 314 aa8.94□□□□□ -0.98
CX3CR1-201ENST00000358309 SAFB2Q14151 953 aaKnown RBP eCLIP8.94□□□□□ -0.98
CX3CR1-201ENST00000358309 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
CX3CR1-201ENST00000358309 IRX6P78412 446 aaPredicted RBP8.92□□□□□ -0.98
CX3CR1-201ENST00000358309 ERICH3Q5RHP9 1530 aa8.91□□□□□ -0.98
CX3CR1-201ENST00000358309 DNMBPQ6XZF7 1577 aa8.91□□□□□ -0.98
CX3CR1-201ENST00000358309 PKD2Q13563 968 aa8.9□□□□□ -0.98
CX3CR1-201ENST00000358309 RAPGEF3O95398 923 aa8.9□□□□□ -0.98
CX3CR1-201ENST00000358309 GTF3C3Q9Y5Q9 886 aa8.89□□□□□ -0.99
CX3CR1-201ENST00000358309 PTPRGP23470 1445 aa8.89□□□□□ -0.99
CX3CR1-201ENST00000358309 TONSLQ96HA7 1378 aa8.89□□□□□ -0.99
CX3CR1-201ENST00000358309 DHX57Q6P158 1386 aaKnown RBP8.88□□□□□ -0.99
CX3CR1-201ENST00000358309 OSCARQ8IYS5 282 aa8.88□□□□□ -0.99
CX3CR1-201ENST00000358309 ABCA10Q8WWZ4 1543 aa8.88□□□□□ -0.99
CX3CR1-201ENST00000358309 DCAF11Q8TEB1 546 aa8.87□□□□□ -0.99
CX3CR1-201ENST00000358309 GRIN2BQ13224 1484 aa8.87□□□□□ -0.99
CX3CR1-201ENST00000358309 FAM9BQ8IZU0 186 aa8.87□□□□□ -0.99
CX3CR1-201ENST00000358309 MPHOSPH9Q99550 1183 aa8.87□□□□□ -0.99
CX3CR1-201ENST00000358309 PRKCSHP14314 528 aaPredicted RBP8.87□□□□□ -0.99
CX3CR1-201ENST00000358309 L3MBTL2Q969R5 705 aa8.87□□□□□ -0.99
CX3CR1-201ENST00000358309 PTPRKQ15262 1439 aa8.86□□□□□ -0.99
CX3CR1-201ENST00000358309 ARID4BQ4LE39 1312 aaPredicted RBP8.86□□□□□ -0.99
CX3CR1-201ENST00000358309 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
CX3CR1-201ENST00000358309 FHAD1B1AJZ9 1412 aa8.85□□□□□ -0.99
CX3CR1-201ENST00000358309 LRRC9Q6ZRR7 1453 aa8.84□□□□□ -0.99
CX3CR1-201ENST00000358309 KIF3BO15066 747 aa8.84□□□□□ -0.99
CX3CR1-201ENST00000358309 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
CX3CR1-201ENST00000358309 TNNT2P45379 298 aaPredicted RBP8.84□□□□□ -0.99
CX3CR1-201ENST00000358309 PCF11O94913 1555 aaKnown RBP8.83□□□□□ -1
CX3CR1-201ENST00000358309 FMN1Q68DA7 1419 aa8.82□□□□□ -1
CX3CR1-201ENST00000358309 SETD5Q9C0A6 1442 aa8.82□□□□□ -1
CX3CR1-201ENST00000358309 NUP155O75694 1391 aa8.82□□□□□ -1
CX3CR1-201ENST00000358309 NCOA2Q15596 1464 aa8.81□□□□□ -1
CX3CR1-201ENST00000358309 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
CX3CR1-201ENST00000358309 FAM69CQ0P6D2 419 aa8.81□□□□□ -1
CX3CR1-201ENST00000358309 STK26Q9P289 416 aa8.81□□□□□ -1
CX3CR1-201ENST00000358309 CUL7Q14999 1698 aa8.8□□□□□ -1
CX3CR1-201ENST00000358309 ARHGEF11O15085 1522 aa8.79□□□□□ -1
CX3CR1-201ENST00000358309 IFT140Q96RY7 1462 aa8.79□□□□□ -1
CX3CR1-201ENST00000358309 CARMIL2Q6F5E8 1435 aa8.79□□□□□ -1
CX3CR1-201ENST00000358309 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
CX3CR1-201ENST00000358309 RBM33Q96EV2 1170 aaKnown RBP8.79□□□□□ -1
CX3CR1-201ENST00000358309 GRIN2AQ12879 1464 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms