RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
CCNE1-202ENST00000357943 KIAA0586Q9BVV6 1533 aa24.28■■□□□ 1.48
CCNE1-202ENST00000357943 LOC105371045A0A1W2PR82 267 aa24.27■■□□□ 1.48
CCNE1-202ENST00000357943 CTTNBP2Q8WZ74 1663 aa24.21■■□□□ 1.47
CCNE1-202ENST00000357943 IQGAP2Q13576 1575 aa24.21■■□□□ 1.47
CCNE1-202ENST00000357943 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
CCNE1-202ENST00000357943 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
CCNE1-202ENST00000357943 SHROOM2Q13796 1616 aa24.13■■□□□ 1.45
CCNE1-202ENST00000357943 RANGAP1P46060 587 aaPredicted RBP24.13■■□□□ 1.45
CCNE1-202ENST00000357943 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
CCNE1-202ENST00000357943 UGGT2Q9NYU1 1516 aa24.09■■□□□ 1.45
CCNE1-202ENST00000357943 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.45
CCNE1-202ENST00000357943 ERCC6L2Q5T890 1561 aa24.06■■□□□ 1.44
CCNE1-202ENST00000357943 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
CCNE1-202ENST00000357943 DISP1Q96F81 1524 aa24.04■■□□□ 1.44
CCNE1-202ENST00000357943 CARMIL2Q6F5E8 1435 aa24■■□□□ 1.43
CCNE1-202ENST00000357943 P3H3Q8IVL6 736 aa23.99■■□□□ 1.43
CCNE1-202ENST00000357943 RIMBP3CA6NJZ7 1639 aa23.97■■□□□ 1.43
CCNE1-202ENST00000357943 RIMBP3BA6NNM3 1639 aa23.97■■□□□ 1.43
CCNE1-202ENST00000357943 KIAA0556O60303 1618 aa23.97■■□□□ 1.43
CCNE1-202ENST00000357943 RIMBP3Q9UFD9 1639 aa23.97■■□□□ 1.43
CCNE1-202ENST00000357943 SAMD9Q5K651 1589 aa23.96■■□□□ 1.43
CCNE1-202ENST00000357943 CEP162Q5TB80 1403 aa23.95■■□□□ 1.43
CCNE1-202ENST00000357943 ARHGAP35Q9NRY4 1499 aa23.94■■□□□ 1.42
CCNE1-202ENST00000357943 CLIP1P30622 1438 aa23.94■■□□□ 1.42
CCNE1-202ENST00000357943 EFCAB5A4FU69 1503 aa23.92■■□□□ 1.42
CCNE1-202ENST00000357943 TTBK1Q5TCY1 1321 aaPredicted RBP23.91■■□□□ 1.42
CCNE1-202ENST00000357943 FHOD3Q2V2M9 1422 aa23.9■■□□□ 1.42
CCNE1-202ENST00000357943 ARAP1Q96P48 1450 aa23.89■■□□□ 1.41
CCNE1-202ENST00000357943 PTPRGP23470 1445 aa23.87■■□□□ 1.41
CCNE1-202ENST00000357943 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
CCNE1-202ENST00000357943 PLB1Q6P1J6 1458 aa23.74■■□□□ 1.39
CCNE1-202ENST00000357943 FMN1Q68DA7 1419 aa23.73■■□□□ 1.39
CCNE1-202ENST00000357943 UACAQ9BZF9 1416 aa23.71■■□□□ 1.39
CCNE1-202ENST00000357943 ABCA8O94911 1581 aa23.69■■□□□ 1.38
CCNE1-202ENST00000357943 ADCY10Q96PN6 1610 aa23.65■■□□□ 1.38
CCNE1-202ENST00000357943 ABCC2Q92887 1545 aa23.65■■□□□ 1.38
CCNE1-202ENST00000357943 UHRF1BP1LA0JNW5 1464 aa23.64■■□□□ 1.37
CCNE1-202ENST00000357943 RAPGEF6Q8TEU7 1601 aa23.63■■□□□ 1.37
CCNE1-202ENST00000357943 ATP1B4Q9UN42 357 aaPredicted RBP23.62■■□□□ 1.37
CCNE1-202ENST00000357943 VPS8Q8N3P4 1428 aa23.62■■□□□ 1.37
CCNE1-202ENST00000357943 ARID3CA6NKF2 412 aa23.6■■□□□ 1.37
CCNE1-202ENST00000357943 PCF11O94913 1555 aaKnown RBP23.6■■□□□ 1.37
CCNE1-202ENST00000357943 NUP153P49790 1475 aaKnown RBP23.6■■□□□ 1.37
CCNE1-202ENST00000357943 CASKIN1Q8WXD9 1431 aa23.6■■□□□ 1.37
CCNE1-202ENST00000357943 FYCO1Q9BQS8 1478 aa23.55■■□□□ 1.36
CCNE1-202ENST00000357943 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
CCNE1-202ENST00000357943 HECW1Q76N89 1606 aa23.54■■□□□ 1.36
CCNE1-202ENST00000357943 NPM1P06748 294 aaKnown RBP eCLIP23.53■■□□□ 1.36
CCNE1-202ENST00000357943 ATP10BO94823 1461 aa23.53■■□□□ 1.36
CCNE1-202ENST00000357943 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
CCNE1-202ENST00000357943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
CCNE1-202ENST00000357943 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
CCNE1-202ENST00000357943 CDK13Q14004 1512 aaKnown RBP23.49■■□□□ 1.35
CCNE1-202ENST00000357943 ZCCHC11Q5TAX3 1644 aaKnown RBP23.48■■□□□ 1.35
CCNE1-202ENST00000357943 LRRIQ1Q96JM4 1722 aa23.46■■□□□ 1.35
CCNE1-202ENST00000357943 CCDC18Q5T9S5 1454 aa23.43■■□□□ 1.34
CCNE1-202ENST00000357943 ASXL2Q76L83 1435 aa23.4■■□□□ 1.34
CCNE1-202ENST00000357943 MAPKBP1O60336 1514 aa23.39■■□□□ 1.34
CCNE1-202ENST00000357943 PLEKHD1A6NEE1 506 aa23.36■■□□□ 1.33
CCNE1-202ENST00000357943 CDK11AQ9UQ88 783 aaPredicted RBP23.35■■□□□ 1.33
CCNE1-202ENST00000357943 WDR7Q9Y4E6 1490 aa23.34■■□□□ 1.33
CCNE1-202ENST00000357943 TIAM1Q13009 1591 aa23.34■■□□□ 1.33
CCNE1-202ENST00000357943 APLP2Q06481 763 aa23.33■■□□□ 1.33
CCNE1-202ENST00000357943 MAGI3Q5TCQ9 1506 aa23.33■■□□□ 1.32
CCNE1-202ENST00000357943 CFAP43Q8NDM7 1665 aa23.31■■□□□ 1.32
CCNE1-202ENST00000357943 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
CCNE1-202ENST00000357943 KCNH8Q96L42 1107 aa23.3■■□□□ 1.32
CCNE1-202ENST00000357943 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
CCNE1-202ENST00000357943 TROQ12816 1431 aaPredicted RBP23.28■■□□□ 1.32
CCNE1-202ENST00000357943 MTUS2Q5JR59 1369 aa23.27■■□□□ 1.32
CCNE1-202ENST00000357943 LRRC9Q6ZRR7 1453 aa23.26■■□□□ 1.31
CCNE1-202ENST00000357943 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
CCNE1-202ENST00000357943 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
CCNE1-202ENST00000357943 EHBP1L1Q8N3D4 1523 aa23.22■■□□□ 1.31
CCNE1-202ENST00000357943 DIP2BQ9P265 1576 aa23.22■■□□□ 1.31
CCNE1-202ENST00000357943 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
CCNE1-202ENST00000357943 KIF14Q15058 1648 aa23.2■■□□□ 1.3
CCNE1-202ENST00000357943 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
CCNE1-202ENST00000357943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.16■■□□□ 1.3
CCNE1-202ENST00000357943 GLI2P10070 1586 aa23.15■■□□□ 1.3
CCNE1-202ENST00000357943 KIF13AQ9H1H9 1805 aa23.14■■□□□ 1.29
CCNE1-202ENST00000357943 TTC37Q6PGP7 1564 aa23.13■■□□□ 1.29
CCNE1-202ENST00000357943 ABCA9Q8IUA7 1624 aa23.12■■□□□ 1.29
CCNE1-202ENST00000357943 NCOA2Q15596 1464 aa23.11■■□□□ 1.29
CCNE1-202ENST00000357943 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
CCNE1-202ENST00000357943 CD109Q6YHK3 1445 aa23.09■■□□□ 1.29
CCNE1-202ENST00000357943 MAP3K4Q9Y6R4 1608 aa23.07■■□□□ 1.28
CCNE1-202ENST00000357943 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
CCNE1-202ENST00000357943 GPATCH8Q9UKJ3 1502 aaKnown RBP23.03■■□□□ 1.28
CCNE1-202ENST00000357943 PHLDB1Q86UU1 1377 aa23.03■■□□□ 1.28
CCNE1-202ENST00000357943 PLCH2O75038 1416 aa23.03■■□□□ 1.28
CCNE1-202ENST00000357943 TSPOAP1O95153 1857 aa22.99■■□□□ 1.27
CCNE1-202ENST00000357943 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
CCNE1-202ENST00000357943 CDC42BPAQ5VT25 1732 aa22.98■■□□□ 1.27
CCNE1-202ENST00000357943 PPRC1Q5VV67 1664 aaKnown RBP22.97■■□□□ 1.27
CCNE1-202ENST00000357943 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
CCNE1-202ENST00000357943 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
CCNE1-202ENST00000357943 ARHGAP5Q13017 1502 aa22.96■■□□□ 1.27
CCNE1-202ENST00000357943 MYOM3Q5VTT5 1437 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms