RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 ATP1B4Q9UN42 357 aaPredicted RBP36.83■■■■□ 3.49
HDGF-201ENST00000357325 FHOD3Q2V2M9 1422 aa36.83■■■■□ 3.49
HDGF-201ENST00000357325 LRRC9Q6ZRR7 1453 aa36.82■■■■□ 3.49
HDGF-201ENST00000357325 PCF11O94913 1555 aaKnown RBP36.81■■■■□ 3.48
HDGF-201ENST00000357325 CLSPNQ9HAW4 1339 aa36.8■■■■□ 3.48
HDGF-201ENST00000357325 PHLDB1Q86UU1 1377 aa36.79■■■■□ 3.48
HDGF-201ENST00000357325 MAP3K1Q13233 1512 aa36.79■■■■□ 3.48
HDGF-201ENST00000357325 LAMC3Q9Y6N6 1575 aa36.74■■■■□ 3.47
HDGF-201ENST00000357325 TDRD9Q8NDG6 1382 aaKnown RBP36.73■■■■□ 3.47
HDGF-201ENST00000357325 FHAD1B1AJZ9 1412 aa36.73■■■■□ 3.47
HDGF-201ENST00000357325 YTHDC1Q96MU7 727 aaKnown RBP36.72■■■■□ 3.47
HDGF-201ENST00000357325 CENPBP07199 599 aaPredicted RBP36.71■■■■□ 3.47
HDGF-201ENST00000357325 RAB3GAP2Q9H2M9 1393 aa36.68■■■■□ 3.46
HDGF-201ENST00000357325 CUL7Q14999 1698 aa36.67■■■■□ 3.46
HDGF-201ENST00000357325 WDR97A6NE52 1622 aa36.66■■■■□ 3.46
HDGF-201ENST00000357325 CFAP43Q8NDM7 1665 aa36.65■■■■□ 3.46
HDGF-201ENST00000357325 GTF3C3Q9Y5Q9 886 aa36.63■■■■□ 3.46
HDGF-201ENST00000357325 FAM50AQ14320 339 aaKnown RBP36.63■■■■□ 3.45
HDGF-201ENST00000357325 CTTNBP2Q8WZ74 1663 aa36.6■■■■□ 3.45
HDGF-201ENST00000357325 EFCAB5A4FU69 1503 aa36.55■■■■□ 3.44
HDGF-201ENST00000357325 ABCA5Q8WWZ7 1642 aa36.54■■■■□ 3.44
HDGF-201ENST00000357325 KIF21AQ7Z4S6 1674 aa36.53■■■■□ 3.44
HDGF-201ENST00000357325 FYCO1Q9BQS8 1478 aa36.53■■■■□ 3.44
HDGF-201ENST00000357325 CASKIN1Q8WXD9 1431 aa36.52■■■■□ 3.44
HDGF-201ENST00000357325 PDS5BQ9NTI5 1447 aa36.52■■■■□ 3.44
HDGF-201ENST00000357325 GAPVD1Q14C86 1478 aa36.52■■■■□ 3.44
HDGF-201ENST00000357325 MAPKBP1O60336 1514 aa36.51■■■■□ 3.43
HDGF-201ENST00000357325 SETD5Q9C0A6 1442 aa36.49■■■■□ 3.43
HDGF-201ENST00000357325 AQRO60306 1485 aaKnown RBP eCLIP36.42■■■■□ 3.423e-7■■■■■ 35.7
HDGF-201ENST00000357325 SNAPC4Q5SXM2 1469 aa36.41■■■■□ 3.42
HDGF-201ENST00000357325 FMN1Q68DA7 1419 aa36.37■■■■□ 3.41
HDGF-201ENST00000357325 SIN3AQ96ST3 1273 aa36.33■■■■□ 3.41
HDGF-201ENST00000357325 SAMD9Q5K651 1589 aa36.32■■■■□ 3.41
HDGF-201ENST00000357325 TARBP1Q13395 1621 aaKnown RBP36.32■■■■□ 3.4
HDGF-201ENST00000357325 LRRIQ1Q96JM4 1722 aa36.31■■■■□ 3.4
HDGF-201ENST00000357325 MTUS2Q5JR59 1369 aa36.24■■■■□ 3.39
HDGF-201ENST00000357325 FGD6Q6ZV73 1430 aa36.22■■■■□ 3.39
HDGF-201ENST00000357325 GRIN2BQ13224 1484 aa36.19■■■■□ 3.38
HDGF-201ENST00000357325 PTPRKQ15262 1439 aa36.15■■■■□ 3.38
HDGF-201ENST00000357325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.14■■■■□ 3.381e-6■■□□□ 11.9
HDGF-201ENST00000357325 PBRM1Q86U86 1689 aa36.1■■■■□ 3.37
HDGF-201ENST00000357325 NCOA2Q15596 1464 aa36.1■■■■□ 3.37
HDGF-201ENST00000357325 MAGI3Q5TCQ9 1506 aa36.06■■■■□ 3.36
HDGF-201ENST00000357325 MRC2Q9UBG0 1479 aa36.01■■■■□ 3.35
HDGF-201ENST00000357325 MYOM3Q5VTT5 1437 aa36■■■■□ 3.35
HDGF-201ENST00000357325 ARID3CA6NKF2 412 aa35.99■■■■□ 3.35
HDGF-201ENST00000357325 ADAMTS12P58397 1594 aa35.98■■■■□ 3.35
HDGF-201ENST00000357325 ZNF608Q9ULD9 1512 aaPredicted RBP35.97■■■■□ 3.35
HDGF-201ENST00000357325 CCDC18Q5T9S5 1454 aa35.95■■■■□ 3.35
HDGF-201ENST00000357325 THOC2Q8NI27 1593 aaKnown RBP35.95■■■■□ 3.35
HDGF-201ENST00000357325 SUPT6HQ7KZ85 1726 aaKnown RBP35.95■■■■□ 3.34
HDGF-201ENST00000357325 IQGAP2Q13576 1575 aa35.94■■■■□ 3.34
HDGF-201ENST00000357325 EHBP1L1Q8N3D4 1523 aa35.93■■■■□ 3.34
HDGF-201ENST00000357325 HIRIP3Q9BW71 556 aaPredicted RBP35.91■■■■□ 3.34
HDGF-201ENST00000357325 HFM1A2PYH4 1435 aa35.91■■■■□ 3.34
HDGF-201ENST00000357325 PTPN23Q9H3S7 1636 aa35.9■■■■□ 3.34
HDGF-201ENST00000357325 UGGT2Q9NYU1 1516 aa35.9■■■■□ 3.34
HDGF-201ENST00000357325 KCNH8Q96L42 1107 aa35.88■■■■□ 3.33
HDGF-201ENST00000357325 NAIPQ13075 1403 aa35.88■■■■□ 3.33
HDGF-201ENST00000357325 ARHGEF11O15085 1522 aa35.86■■■■□ 3.33
HDGF-201ENST00000357325 CDK13Q14004 1512 aaKnown RBP35.86■■■■□ 3.33
HDGF-201ENST00000357325 PPP1R15AO75807 674 aaPredicted RBP35.86■■■■□ 3.33
HDGF-201ENST00000357325 CHIC2Q9UKJ5 165 aa35.83■■■■□ 3.33
HDGF-201ENST00000357325 EPRSP07814 1512 aaKnown RBP35.82■■■■□ 3.32
HDGF-201ENST00000357325 PELP1Q8IZL8 1130 aaKnown RBP35.82■■■■□ 3.32
HDGF-201ENST00000357325 DDX10Q13206 875 aaKnown RBP35.81■■■■□ 3.32
HDGF-201ENST00000357325 RRP7BPQ9NSQ0 103 aa35.8■■■■□ 3.32
HDGF-201ENST00000357325 HECW1Q76N89 1606 aa35.8■■■■□ 3.32
HDGF-201ENST00000357325 UACAQ9BZF9 1416 aa35.79■■■■□ 3.32
HDGF-201ENST00000357325 TIMELESSQ9UNS1 1208 aa35.78■■■■□ 3.32
HDGF-201ENST00000357325 IFT140Q96RY7 1462 aa35.74■■■■□ 3.31
HDGF-201ENST00000357325 WDR62O43379 1518 aa35.73■■■■□ 3.31
HDGF-201ENST00000357325 TONSLQ96HA7 1378 aa35.69■■■■□ 3.3
HDGF-201ENST00000357325 TCOF1Q13428 1488 aaKnown RBP35.67■■■■□ 3.3
HDGF-201ENST00000357325 DISP1Q96F81 1524 aa35.64■■■■□ 3.3
HDGF-201ENST00000357325 KDM6BO15054 1643 aa35.63■■■■□ 3.3
HDGF-201ENST00000357325 EIF4G3O43432 1585 aaKnown RBP35.6■■■■□ 3.29
HDGF-201ENST00000357325 KIAA0586Q9BVV6 1533 aa35.59■■■■□ 3.29
HDGF-201ENST00000357325 DENND4BO75064 1496 aaPredicted RBP35.58■■■■□ 3.29
HDGF-201ENST00000357325 KIAA0556O60303 1618 aa35.58■■■■□ 3.29
HDGF-201ENST00000357325 GRIN2AQ12879 1464 aa35.56■■■■□ 3.28
HDGF-201ENST00000357325 TRIM52Q96A61 297 aa35.54■■■■□ 3.28
HDGF-201ENST00000357325 KDM5BQ9UGL1 1544 aa35.53■■■■□ 3.28
HDGF-201ENST00000357325 NUP153P49790 1475 aaKnown RBP35.51■■■■□ 3.28
HDGF-201ENST00000357325 ZNF644Q9H582 1327 aaPredicted RBP35.5■■■■□ 3.27
HDGF-201ENST00000357325 GCC2Q8IWJ2 1684 aa35.5■■■■□ 3.27
HDGF-201ENST00000357325 MIA2Q96PC5 1412 aa35.5■■■■□ 3.27
HDGF-201ENST00000357325 ERCC6Q03468 1493 aa35.49■■■■□ 3.27
HDGF-201ENST00000357325 FOXD1Q16676 465 aa35.46■■■■□ 3.27
HDGF-201ENST00000357325 FBLN2P98095 1184 aa35.43■■■■□ 3.26
HDGF-201ENST00000357325 RAPGEF6Q8TEU7 1601 aa35.41■■■■□ 3.26
HDGF-201ENST00000357325 CHMP7Q8WUX9 453 aaPredicted RBP35.4■■■■□ 3.26
HDGF-201ENST00000357325 MPHOSPH9Q99550 1183 aa35.39■■■■□ 3.26
HDGF-201ENST00000357325 AKNAQ7Z591 1439 aa35.39■■■■□ 3.26
HDGF-201ENST00000357325 SUPT16HQ9Y5B9 1047 aaKnown RBP35.38■■■■□ 3.25
HDGF-201ENST00000357325 CEP170Q5SW79 1584 aa35.38■■■■□ 3.25
HDGF-201ENST00000357325 DAPK1P53355 1430 aa35.36■■■■□ 3.25
HDGF-201ENST00000357325 PRG4Q92954 1404 aaPredicted RBP35.35■■■■□ 3.25
HDGF-201ENST00000357325 ABCC5O15440 1437 aa35.34■■■■□ 3.25
HDGF-201ENST00000357325 PLB1Q6P1J6 1458 aa35.34■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms