RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 GOLGA3Q08378 1498 aa25.43■■□□□ 1.66
TRIM13-201ENST00000356017 JPH4Q96JJ6 628 aa25.41■■□□□ 1.66
TRIM13-201ENST00000356017 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
TRIM13-201ENST00000356017 IQGAP2Q13576 1575 aa25.37■■□□□ 1.65
TRIM13-201ENST00000356017 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
TRIM13-201ENST00000356017 CTTNBP2Q8WZ74 1663 aa25.34■■□□□ 1.65
TRIM13-201ENST00000356017 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
TRIM13-201ENST00000356017 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
TRIM13-201ENST00000356017 ARHGEF11O15085 1522 aa25.28■■□□□ 1.64
TRIM13-201ENST00000356017 UGGT2Q9NYU1 1516 aa25.25■■□□□ 1.63
TRIM13-201ENST00000356017 CARMIL2Q6F5E8 1435 aa25.24■■□□□ 1.63
TRIM13-201ENST00000356017 RIMBP3CA6NJZ7 1639 aa25.21■■□□□ 1.63
TRIM13-201ENST00000356017 RIMBP3BA6NNM3 1639 aa25.21■■□□□ 1.63
TRIM13-201ENST00000356017 RIMBP3Q9UFD9 1639 aa25.21■■□□□ 1.63
TRIM13-201ENST00000356017 TNIKQ9UKE5 1360 aa25.2■■□□□ 1.62
TRIM13-201ENST00000356017 ERCC6L2Q5T890 1561 aa25.17■■□□□ 1.62
TRIM13-201ENST00000356017 LOC105371045A0A1W2PR82 267 aa25.16■■□□□ 1.62
TRIM13-201ENST00000356017 DISP1Q96F81 1524 aa25.16■■□□□ 1.62
TRIM13-201ENST00000356017 RANGAP1P46060 587 aaPredicted RBP25.14■■□□□ 1.61
TRIM13-201ENST00000356017 KIAA0556O60303 1618 aa25.11■■□□□ 1.61
TRIM13-201ENST00000356017 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
TRIM13-201ENST00000356017 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
TRIM13-201ENST00000356017 EFCAB5A4FU69 1503 aa25.07■■□□□ 1.6
TRIM13-201ENST00000356017 PTPRGP23470 1445 aa25.06■■□□□ 1.6
TRIM13-201ENST00000356017 SAMD9Q5K651 1589 aa25.06■■□□□ 1.6
TRIM13-201ENST00000356017 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
TRIM13-201ENST00000356017 TTBK1Q5TCY1 1321 aaPredicted RBP25■■□□□ 1.59
TRIM13-201ENST00000356017 CLIP1P30622 1438 aa24.99■■□□□ 1.59
TRIM13-201ENST00000356017 ARHGAP35Q9NRY4 1499 aa24.98■■□□□ 1.59
TRIM13-201ENST00000356017 CEP162Q5TB80 1403 aa24.96■■□□□ 1.59
TRIM13-201ENST00000356017 FHOD3Q2V2M9 1422 aa24.94■■□□□ 1.58
TRIM13-201ENST00000356017 UACAQ9BZF9 1416 aa24.89■■□□□ 1.58
TRIM13-201ENST00000356017 FMN1Q68DA7 1419 aa24.87■■□□□ 1.57
TRIM13-201ENST00000356017 UHRF1BP1LA0JNW5 1464 aa24.84■■□□□ 1.57
TRIM13-201ENST00000356017 PLB1Q6P1J6 1458 aa24.84■■□□□ 1.57
TRIM13-201ENST00000356017 NPM1P06748 294 aaKnown RBP eCLIP24.82■■□□□ 1.56
TRIM13-201ENST00000356017 ABCC2Q92887 1545 aa24.82■■□□□ 1.56
TRIM13-201ENST00000356017 ABCA8O94911 1581 aa24.81■■□□□ 1.56
TRIM13-201ENST00000356017 ADCY10Q96PN6 1610 aa24.8■■□□□ 1.56
TRIM13-201ENST00000356017 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
TRIM13-201ENST00000356017 KDM5BQ9UGL1 1544 aa24.71■■□□□ 1.55
TRIM13-201ENST00000356017 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
TRIM13-201ENST00000356017 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
TRIM13-201ENST00000356017 NUP153P49790 1475 aaKnown RBP24.68■■□□□ 1.54
TRIM13-201ENST00000356017 HECW1Q76N89 1606 aa24.66■■□□□ 1.54
TRIM13-201ENST00000356017 VPS8Q8N3P4 1428 aa24.64■■□□□ 1.54
TRIM13-201ENST00000356017 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.54
TRIM13-201ENST00000356017 ATP10BO94823 1461 aa24.63■■□□□ 1.53
TRIM13-201ENST00000356017 ARID3CA6NKF2 412 aa24.63■■□□□ 1.53
TRIM13-201ENST00000356017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.63■■□□□ 1.53
TRIM13-201ENST00000356017 HNRNPUL2Q1KMD3 747 aaKnown RBP24.63■■□□□ 1.53
TRIM13-201ENST00000356017 MAPKBP1O60336 1514 aa24.61■■□□□ 1.53
TRIM13-201ENST00000356017 PCF11O94913 1555 aaKnown RBP24.61■■□□□ 1.53
TRIM13-201ENST00000356017 ZCCHC11Q5TAX3 1644 aaKnown RBP24.61■■□□□ 1.53
TRIM13-201ENST00000356017 EPRSP07814 1512 aaKnown RBP24.59■■□□□ 1.53
TRIM13-201ENST00000356017 ASXL2Q76L83 1435 aa24.56■■□□□ 1.52
TRIM13-201ENST00000356017 CCDC18Q5T9S5 1454 aa24.56■■□□□ 1.52
TRIM13-201ENST00000356017 CDK11AQ9UQ88 783 aaPredicted RBP24.55■■□□□ 1.52
TRIM13-201ENST00000356017 PLEKHD1A6NEE1 506 aa24.53■■□□□ 1.52
TRIM13-201ENST00000356017 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
TRIM13-201ENST00000356017 WDR7Q9Y4E6 1490 aa24.51■■□□□ 1.51
TRIM13-201ENST00000356017 TRHP20396 242 aaPredicted RBP24.46■■□□□ 1.51
TRIM13-201ENST00000356017 ABCC10Q5T3U5 1492 aa24.46■■□□□ 1.51
TRIM13-201ENST00000356017 APLP2Q06481 763 aa24.45■■□□□ 1.5
TRIM13-201ENST00000356017 LRRIQ1Q96JM4 1722 aa24.44■■□□□ 1.5
TRIM13-201ENST00000356017 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
TRIM13-201ENST00000356017 FAM69CQ0P6D2 419 aa24.43■■□□□ 1.5
TRIM13-201ENST00000356017 MAP3K1Q13233 1512 aa24.39■■□□□ 1.49
TRIM13-201ENST00000356017 TROQ12816 1431 aaPredicted RBP24.39■■□□□ 1.49
TRIM13-201ENST00000356017 DIP2BQ9P265 1576 aa24.38■■□□□ 1.49
TRIM13-201ENST00000356017 MTUS2Q5JR59 1369 aa24.37■■□□□ 1.49
TRIM13-201ENST00000356017 GLI2P10070 1586 aa24.36■■□□□ 1.49
TRIM13-201ENST00000356017 TIAM1Q13009 1591 aa24.35■■□□□ 1.49
TRIM13-201ENST00000356017 CFAP43Q8NDM7 1665 aa24.33■■□□□ 1.48
TRIM13-201ENST00000356017 MAGI3Q5TCQ9 1506 aa24.31■■□□□ 1.48
TRIM13-201ENST00000356017 KIF13AQ9H1H9 1805 aa24.29■■□□□ 1.48
TRIM13-201ENST00000356017 EHBP1L1Q8N3D4 1523 aa24.28■■□□□ 1.48
TRIM13-201ENST00000356017 LRRC9Q6ZRR7 1453 aa24.28■■□□□ 1.48
TRIM13-201ENST00000356017 KIF14Q15058 1648 aa24.28■■□□□ 1.48
TRIM13-201ENST00000356017 CD109Q6YHK3 1445 aa24.26■■□□□ 1.47
TRIM13-201ENST00000356017 ABCA9Q8IUA7 1624 aa24.26■■□□□ 1.47
TRIM13-201ENST00000356017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.25■■□□□ 1.47
TRIM13-201ENST00000356017 KANK4Q5T7N3 995 aaPredicted RBP24.24■■□□□ 1.47
TRIM13-201ENST00000356017 MAP3K4Q9Y6R4 1608 aa24.23■■□□□ 1.47
TRIM13-201ENST00000356017 TTC37Q6PGP7 1564 aa24.18■■□□□ 1.46
TRIM13-201ENST00000356017 TEX14Q8IWB6 1497 aa24.17■■□□□ 1.46
TRIM13-201ENST00000356017 PLCH2O75038 1416 aa24.16■■□□□ 1.46
TRIM13-201ENST00000356017 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
TRIM13-201ENST00000356017 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
TRIM13-201ENST00000356017 NCOA2Q15596 1464 aa24.14■■□□□ 1.46
TRIM13-201ENST00000356017 ARAP3Q8WWN8 1544 aa24.11■■□□□ 1.45
TRIM13-201ENST00000356017 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
TRIM13-201ENST00000356017 PHLDB1Q86UU1 1377 aa24.1■■□□□ 1.45
TRIM13-201ENST00000356017 EFCAB2Q5VUJ9 269 aa24.1■■□□□ 1.45
TRIM13-201ENST00000356017 GPATCH8Q9UKJ3 1502 aaKnown RBP24.09■■□□□ 1.45
TRIM13-201ENST00000356017 MYO5CQ9NQX4 1742 aa24.09■■□□□ 1.45
TRIM13-201ENST00000356017 PPRC1Q5VV67 1664 aaKnown RBP24.08■■□□□ 1.45
TRIM13-201ENST00000356017 FANCAO15360 1455 aa24.08■■□□□ 1.44
TRIM13-201ENST00000356017 NEO1Q92859 1461 aa24.07■■□□□ 1.44
TRIM13-201ENST00000356017 CFDP1Q9UEE9 299 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms