RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 KIF21BO75037 1637 aa12.77□□□□□ -0.37
COMMD9-202ENST00000355500 CUX1P39880 1505 aa12.76□□□□□ -0.37
COMMD9-202ENST00000355500 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
COMMD9-202ENST00000355500 FGD5Q6ZNL6 1462 aa12.75□□□□□ -0.37
COMMD9-202ENST00000355500 SOGA1O94964 1423 aa12.75□□□□□ -0.37
COMMD9-202ENST00000355500 TULP1O00294 542 aaPredicted RBP12.74□□□□□ -0.37
COMMD9-202ENST00000355500 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
COMMD9-202ENST00000355500 SHROOM2Q13796 1616 aa12.72□□□□□ -0.37
COMMD9-202ENST00000355500 ARAP1Q96P48 1450 aa12.7□□□□□ -0.38
COMMD9-202ENST00000355500 ERICH3Q5RHP9 1530 aa12.69□□□□□ -0.38
COMMD9-202ENST00000355500 SNAPC4Q5SXM2 1469 aa12.68□□□□□ -0.38
COMMD9-202ENST00000355500 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.38
COMMD9-202ENST00000355500 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
COMMD9-202ENST00000355500 ADAMTS12P58397 1594 aa12.67□□□□□ -0.38
COMMD9-202ENST00000355500 GOLGA3Q08378 1498 aa12.66□□□□□ -0.38
COMMD9-202ENST00000355500 FAM9AQ8IZU1 332 aaPredicted RBP12.66□□□□□ -0.38
COMMD9-202ENST00000355500 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
COMMD9-202ENST00000355500 NUP160Q12769 1436 aa12.64□□□□□ -0.39
COMMD9-202ENST00000355500 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
COMMD9-202ENST00000355500 TRIM26Q12899 539 aaPredicted RBP12.61□□□□□ -0.39
COMMD9-202ENST00000355500 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
COMMD9-202ENST00000355500 FHAD1B1AJZ9 1412 aa12.58□□□□□ -0.4
COMMD9-202ENST00000355500 HOMEZQ8IX15 550 aa12.57□□□□□ -0.4
COMMD9-202ENST00000355500 CEP162Q5TB80 1403 aa12.55□□□□□ -0.4
COMMD9-202ENST00000355500 CUL7Q14999 1698 aa12.54□□□□□ -0.4
COMMD9-202ENST00000355500 HRCP23327 699 aa12.54□□□□□ -0.4
COMMD9-202ENST00000355500 PODXL2Q9NZ53 605 aa12.54□□□□□ -0.4
COMMD9-202ENST00000355500 TDRD9Q8NDG6 1382 aaKnown RBP12.53□□□□□ -0.4
COMMD9-202ENST00000355500 RUSC2Q8N2Y8 1516 aa12.53□□□□□ -0.4
COMMD9-202ENST00000355500 CEP170Q5SW79 1584 aa12.53□□□□□ -0.4
COMMD9-202ENST00000355500 PRXQ9BXM0 1461 aa12.52□□□□□ -0.41
COMMD9-202ENST00000355500 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
COMMD9-202ENST00000355500 CHMP7Q8WUX9 453 aaPredicted RBP12.48□□□□□ -0.41
COMMD9-202ENST00000355500 KIF27Q86VH2 1401 aa12.48□□□□□ -0.41
COMMD9-202ENST00000355500 MAPKBP1O60336 1514 aa12.47□□□□□ -0.41
COMMD9-202ENST00000355500 PCGF6Q9BYE7 350 aa12.46□□□□□ -0.41
COMMD9-202ENST00000355500 KIF13AQ9H1H9 1805 aa12.42□□□□□ -0.42
COMMD9-202ENST00000355500 RAPGEF2Q9Y4G8 1499 aa12.41□□□□□ -0.42
COMMD9-202ENST00000355500 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
COMMD9-202ENST00000355500 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
COMMD9-202ENST00000355500 KIAA0586Q9BVV6 1533 aa12.39□□□□□ -0.43
COMMD9-202ENST00000355500 ZEB1P37275 1124 aaPredicted RBP12.38□□□□□ -0.43
COMMD9-202ENST00000355500 CLIP1P30622 1438 aa12.38□□□□□ -0.43
COMMD9-202ENST00000355500 GLI2P10070 1586 aa12.35□□□□□ -0.43
COMMD9-202ENST00000355500 UHRF1BP1LA0JNW5 1464 aa12.34□□□□□ -0.43
COMMD9-202ENST00000355500 TPRNQ4KMQ1 711 aa12.33□□□□□ -0.44
COMMD9-202ENST00000355500 ERCC6L2Q5T890 1561 aa12.33□□□□□ -0.44
COMMD9-202ENST00000355500 ABCC10Q5T3U5 1492 aa12.32□□□□□ -0.44
COMMD9-202ENST00000355500 FBLN2P98095 1184 aa12.31□□□□□ -0.44
COMMD9-202ENST00000355500 DIP2BQ9P265 1576 aa12.31□□□□□ -0.44
COMMD9-202ENST00000355500 MAP3K1Q13233 1512 aa12.31□□□□□ -0.44
COMMD9-202ENST00000355500 UBTFP17480 764 aaKnown RBP12.3□□□□□ -0.44
COMMD9-202ENST00000355500 ADCY10Q96PN6 1610 aa12.29□□□□□ -0.44
COMMD9-202ENST00000355500 PRG4Q92954 1404 aaPredicted RBP12.29□□□□□ -0.44
COMMD9-202ENST00000355500 IGF1RP08069 1367 aa12.27□□□□□ -0.45
COMMD9-202ENST00000355500 UGGT2Q9NYU1 1516 aa12.26□□□□□ -0.45
COMMD9-202ENST00000355500 EFCAB5A4FU69 1503 aa12.26□□□□□ -0.45
COMMD9-202ENST00000355500 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
COMMD9-202ENST00000355500 IQGAP2Q13576 1575 aa12.24□□□□□ -0.45
COMMD9-202ENST00000355500 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
COMMD9-202ENST00000355500 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
COMMD9-202ENST00000355500 CARMIL2Q6F5E8 1435 aa12.21□□□□□ -0.46
COMMD9-202ENST00000355500 PLB1Q6P1J6 1458 aa12.21□□□□□ -0.46
COMMD9-202ENST00000355500 ARHGAP35Q9NRY4 1499 aa12.21□□□□□ -0.46
COMMD9-202ENST00000355500 CARMIL1Q5VZK9 1371 aa12.2□□□□□ -0.46
COMMD9-202ENST00000355500 ABCC2Q92887 1545 aa12.2□□□□□ -0.46
COMMD9-202ENST00000355500 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
COMMD9-202ENST00000355500 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
COMMD9-202ENST00000355500 MAP3K4Q9Y6R4 1608 aa12.18□□□□□ -0.46
COMMD9-202ENST00000355500 KDM5BQ9UGL1 1544 aa12.18□□□□□ -0.46
COMMD9-202ENST00000355500 PPRC1Q5VV67 1664 aaKnown RBP12.17□□□□□ -0.46
COMMD9-202ENST00000355500 GTF3C3Q9Y5Q9 886 aa12.17□□□□□ -0.46
COMMD9-202ENST00000355500 BCANQ96GW7 911 aa12.16□□□□□ -0.46
COMMD9-202ENST00000355500 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
COMMD9-202ENST00000355500 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.47
COMMD9-202ENST00000355500 KIAA0556O60303 1618 aa12.14□□□□□ -0.47
COMMD9-202ENST00000355500 SAMD9Q5K651 1589 aa12.14□□□□□ -0.47
COMMD9-202ENST00000355500 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
COMMD9-202ENST00000355500 KDM6BO15054 1643 aa12.14□□□□□ -0.47
COMMD9-202ENST00000355500 UBE2Q2Q8WVN8 375 aa12.13□□□□□ -0.47
COMMD9-202ENST00000355500 DISP1Q96F81 1524 aa12.13□□□□□ -0.47
COMMD9-202ENST00000355500 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
COMMD9-202ENST00000355500 RRBP1Q9P2E9 1410 aaKnown RBP12.12□□□□□ -0.47
COMMD9-202ENST00000355500 TEX14Q8IWB6 1497 aa12.11□□□□□ -0.47
COMMD9-202ENST00000355500 FYCO1Q9BQS8 1478 aa12.11□□□□□ -0.47
COMMD9-202ENST00000355500 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
COMMD9-202ENST00000355500 PTPRGP23470 1445 aa12.1□□□□□ -0.47
COMMD9-202ENST00000355500 UACAQ9BZF9 1416 aa12.1□□□□□ -0.47
COMMD9-202ENST00000355500 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
COMMD9-202ENST00000355500 ZCCHC11Q5TAX3 1644 aaKnown RBP12.09□□□□□ -0.47
COMMD9-202ENST00000355500 ABCA8O94911 1581 aa12.08□□□□□ -0.48
COMMD9-202ENST00000355500 MAGI3Q5TCQ9 1506 aa12.07□□□□□ -0.48
COMMD9-202ENST00000355500 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
COMMD9-202ENST00000355500 PCF11O94913 1555 aaKnown RBP12.06□□□□□ -0.48
COMMD9-202ENST00000355500 CASKIN1Q8WXD9 1431 aa12.05□□□□□ -0.48
COMMD9-202ENST00000355500 EPRSP07814 1512 aaKnown RBP12.05□□□□□ -0.48
COMMD9-202ENST00000355500 FMN1Q68DA7 1419 aa12.04□□□□□ -0.48
COMMD9-202ENST00000355500 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
COMMD9-202ENST00000355500 CLSPNQ9HAW4 1339 aa12.02□□□□□ -0.49
COMMD9-202ENST00000355500 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms