RNA–Protein interactions for RNA: ENST00000355135.6

GPM6B-202, Transcript of glycoprotein M6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPM6B, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-202ENST00000355135 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
GPM6B-202ENST00000355135 RUSC2Q8N2Y8 1516 aa22.52■■□□□ 1.2
GPM6B-202ENST00000355135 ERCC6L2Q5T890 1561 aa22.45■■□□□ 1.18
GPM6B-202ENST00000355135 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
GPM6B-202ENST00000355135 KIAA0586Q9BVV6 1533 aa22.44■■□□□ 1.18
GPM6B-202ENST00000355135 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
GPM6B-202ENST00000355135 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
GPM6B-202ENST00000355135 EEA1Q15075 1411 aa22.39■■□□□ 1.18
GPM6B-202ENST00000355135 PRXQ9BXM0 1461 aa22.31■■□□□ 1.16
GPM6B-202ENST00000355135 IQGAP2Q13576 1575 aa22.31■■□□□ 1.16
GPM6B-202ENST00000355135 CSRNP3Q8WYN3 585 aa22.26■■□□□ 1.15
GPM6B-202ENST00000355135 CTTNBP2Q8WZ74 1663 aa22.23■■□□□ 1.15
GPM6B-202ENST00000355135 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
GPM6B-202ENST00000355135 CARMIL2Q6F5E8 1435 aa22.21■■□□□ 1.15
GPM6B-202ENST00000355135 UGGT2Q9NYU1 1516 aa22.19■■□□□ 1.14
GPM6B-202ENST00000355135 DISP1Q96F81 1524 aa22.15■■□□□ 1.14
GPM6B-202ENST00000355135 TNIKQ9UKE5 1360 aa22.14■■□□□ 1.13
GPM6B-202ENST00000355135 KIF21BO75037 1637 aa22.13■■□□□ 1.13
GPM6B-202ENST00000355135 PTPRGP23470 1445 aa22.13■■□□□ 1.13
GPM6B-202ENST00000355135 TRHP20396 242 aaPredicted RBP22.12■■□□□ 1.13
GPM6B-202ENST00000355135 GOLGA3Q08378 1498 aa22.11■■□□□ 1.13
GPM6B-202ENST00000355135 KIAA0556O60303 1618 aa22.09■■□□□ 1.13
GPM6B-202ENST00000355135 ADCY10Q96PN6 1610 aa22.09■■□□□ 1.13
GPM6B-202ENST00000355135 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
GPM6B-202ENST00000355135 NPM1P06748 294 aaKnown RBP eCLIP22.03■■□□□ 1.12
GPM6B-202ENST00000355135 UHRF1BP1LA0JNW5 1464 aa21.98■■□□□ 1.11
GPM6B-202ENST00000355135 UACAQ9BZF9 1416 aa21.98■■□□□ 1.11
GPM6B-202ENST00000355135 MAPKBP1O60336 1514 aa21.98■■□□□ 1.11
GPM6B-202ENST00000355135 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
GPM6B-202ENST00000355135 ABCC2Q92887 1545 aa21.95■■□□□ 1.1
GPM6B-202ENST00000355135 UBTFP17480 764 aaKnown RBP21.94■■□□□ 1.1
GPM6B-202ENST00000355135 SAMD9Q5K651 1589 aa21.92■■□□□ 1.1
GPM6B-202ENST00000355135 KIF13AQ9H1H9 1805 aa21.9■■□□□ 1.1
GPM6B-202ENST00000355135 ABCC10Q5T3U5 1492 aa21.88■■□□□ 1.09
GPM6B-202ENST00000355135 KDM5BQ9UGL1 1544 aa21.87■■□□□ 1.09
GPM6B-202ENST00000355135 PLB1Q6P1J6 1458 aa21.86■■□□□ 1.09
GPM6B-202ENST00000355135 ABCA8O94911 1581 aa21.86■■□□□ 1.09
GPM6B-202ENST00000355135 P3H3Q8IVL6 736 aa21.86■■□□□ 1.09
GPM6B-202ENST00000355135 DIP2BQ9P265 1576 aa21.84■■□□□ 1.09
GPM6B-202ENST00000355135 ZCCHC11Q5TAX3 1644 aaKnown RBP21.82■■□□□ 1.08
GPM6B-202ENST00000355135 EFCAB5A4FU69 1503 aa21.82■■□□□ 1.08
GPM6B-202ENST00000355135 RANGAP1P46060 587 aaPredicted RBP21.82■■□□□ 1.08
GPM6B-202ENST00000355135 FAM69CQ0P6D2 419 aa21.82■■□□□ 1.08
GPM6B-202ENST00000355135 ASXL2Q76L83 1435 aa21.81■■□□□ 1.08
GPM6B-202ENST00000355135 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.08
GPM6B-202ENST00000355135 CLIP1P30622 1438 aa21.75■■□□□ 1.07
GPM6B-202ENST00000355135 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
GPM6B-202ENST00000355135 GLI2P10070 1586 aa21.72■■□□□ 1.07
GPM6B-202ENST00000355135 PCGF6Q9BYE7 350 aa21.71■■□□□ 1.07
GPM6B-202ENST00000355135 WDR7Q9Y4E6 1490 aa21.69■■□□□ 1.06
GPM6B-202ENST00000355135 EPRSP07814 1512 aaKnown RBP21.69■■□□□ 1.06
GPM6B-202ENST00000355135 ATP10BO94823 1461 aa21.67■■□□□ 1.06
GPM6B-202ENST00000355135 ARHGAP35Q9NRY4 1499 aa21.67■■□□□ 1.06
GPM6B-202ENST00000355135 TRIM26Q12899 539 aaPredicted RBP21.67■■□□□ 1.06
GPM6B-202ENST00000355135 TSPOAP1O95153 1857 aa21.66■■□□□ 1.06
GPM6B-202ENST00000355135 NUP153P49790 1475 aaKnown RBP21.63■■□□□ 1.05
GPM6B-202ENST00000355135 ARID3CA6NKF2 412 aa21.63■■□□□ 1.05
GPM6B-202ENST00000355135 FMN1Q68DA7 1419 aa21.61■■□□□ 1.05
GPM6B-202ENST00000355135 MAP3K4Q9Y6R4 1608 aa21.61■■□□□ 1.05
GPM6B-202ENST00000355135 PPRC1Q5VV67 1664 aaKnown RBP21.58■■□□□ 1.05
GPM6B-202ENST00000355135 VPS8Q8N3P4 1428 aa21.58■■□□□ 1.05
GPM6B-202ENST00000355135 KCNH8Q96L42 1107 aa21.56■■□□□ 1.04
GPM6B-202ENST00000355135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
GPM6B-202ENST00000355135 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
GPM6B-202ENST00000355135 CFAP43Q8NDM7 1665 aa21.55■■□□□ 1.04
GPM6B-202ENST00000355135 HECW1Q76N89 1606 aa21.52■■□□□ 1.04
GPM6B-202ENST00000355135 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.03
GPM6B-202ENST00000355135 KDM6BO15054 1643 aa21.51■■□□□ 1.03
GPM6B-202ENST00000355135 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
GPM6B-202ENST00000355135 CD109Q6YHK3 1445 aa21.49■■□□□ 1.03
GPM6B-202ENST00000355135 MAGI3Q5TCQ9 1506 aa21.48■■□□□ 1.03
GPM6B-202ENST00000355135 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
GPM6B-202ENST00000355135 ABCA9Q8IUA7 1624 aa21.47■■□□□ 1.03
GPM6B-202ENST00000355135 CDK13Q14004 1512 aaKnown RBP21.47■■□□□ 1.03
GPM6B-202ENST00000355135 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
GPM6B-202ENST00000355135 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
GPM6B-202ENST00000355135 PCF11O94913 1555 aaKnown RBP21.41■■□□□ 1.02
GPM6B-202ENST00000355135 LRRIQ1Q96JM4 1722 aa21.4■■□□□ 1.02
GPM6B-202ENST00000355135 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
GPM6B-202ENST00000355135 FYCO1Q9BQS8 1478 aa21.37■■□□□ 1.01
GPM6B-202ENST00000355135 COL17A1Q9UMD9 1497 aaPredicted RBP21.37■■□□□ 1.01
GPM6B-202ENST00000355135 CCDC18Q5T9S5 1454 aa21.36■■□□□ 1.01
GPM6B-202ENST00000355135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.35■■□□□ 1.01
GPM6B-202ENST00000355135 PHLDB1Q86UU1 1377 aa21.32■■□□□ 1
GPM6B-202ENST00000355135 TTC37Q6PGP7 1564 aa21.31■■□□□ 1
GPM6B-202ENST00000355135 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
GPM6B-202ENST00000355135 APLP2Q06481 763 aa21.31■■□□□ 1
GPM6B-202ENST00000355135 NEO1Q92859 1461 aa21.31■■□□□ 1
GPM6B-202ENST00000355135 ARAP3Q8WWN8 1544 aa21.29■■□□□ 1
GPM6B-202ENST00000355135 KIF14Q15058 1648 aa21.27■■□□□ 1
GPM6B-202ENST00000355135 CFAP74Q9C0B2 1584 aa21.25■□□□□ 0.99
GPM6B-202ENST00000355135 HRCP23327 699 aa21.24■□□□□ 0.99
GPM6B-202ENST00000355135 MYO5CQ9NQX4 1742 aa21.23■□□□□ 0.99
GPM6B-202ENST00000355135 FANCAO15360 1455 aa21.23■□□□□ 0.99
GPM6B-202ENST00000355135 PLCH2O75038 1416 aa21.22■□□□□ 0.99
GPM6B-202ENST00000355135 AKNAQ7Z591 1439 aa21.19■□□□□ 0.98
GPM6B-202ENST00000355135 MAP3K1Q13233 1512 aa21.18■□□□□ 0.98
GPM6B-202ENST00000355135 TIAM1Q13009 1591 aa21.16■□□□□ 0.98
GPM6B-202ENST00000355135 RAPGEF3O95398 923 aa21.15■□□□□ 0.98
GPM6B-202ENST00000355135 DENND4BO75064 1496 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms