RNA–Protein interactions for RNA: ENST00000350902.9

GRIN1-201, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIN1, Length 4,465 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-201ENST00000350902 MRS2Q9HD23 443 aa21.19■□□□□ 0.98
GRIN1-201ENST00000350902 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
GRIN1-201ENST00000350902 SALL2Q9Y467 1007 aaPredicted RBP21.16■□□□□ 0.98
GRIN1-201ENST00000350902 ANP32AP39687 249 aaKnown RBP21.15■□□□□ 0.98
GRIN1-201ENST00000350902 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
GRIN1-201ENST00000350902 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
GRIN1-201ENST00000350902 CCDC136Q96JN2 1154 aa21.08■□□□□ 0.97
GRIN1-201ENST00000350902 RAB3GAP2Q9H2M9 1393 aa21.08■□□□□ 0.97
GRIN1-201ENST00000350902 B4GALNT3Q6L9W6 998 aa21.08■□□□□ 0.96
GRIN1-201ENST00000350902 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.96
GRIN1-201ENST00000350902 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
GRIN1-201ENST00000350902 EIF4G2P78344 907 aaKnown RBP eCLIP21.01■□□□□ 0.95
GRIN1-201ENST00000350902 MTUS2Q5JR59 1369 aa21.01■□□□□ 0.95
GRIN1-201ENST00000350902 SLC24A1O60721 1099 aa21■□□□□ 0.95
GRIN1-201ENST00000350902 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
GRIN1-201ENST00000350902 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
GRIN1-201ENST00000350902 ZBTB47Q9UFB7 747 aaPredicted RBP20.96■□□□□ 0.95
GRIN1-201ENST00000350902 SETD5Q9C0A6 1442 aa20.94■□□□□ 0.94
GRIN1-201ENST00000350902 CCER2I3L3R5 266 aa20.94■□□□□ 0.94
GRIN1-201ENST00000350902 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
GRIN1-201ENST00000350902 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
GRIN1-201ENST00000350902 PPP4R2Q9NY27 417 aa20.92■□□□□ 0.94
GRIN1-201ENST00000350902 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
GRIN1-201ENST00000350902 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
GRIN1-201ENST00000350902 TSPY4P0CV99 314 aa20.84■□□□□ 0.93
GRIN1-201ENST00000350902 TSPY10P0CW01 314 aa20.84■□□□□ 0.93
GRIN1-201ENST00000350902 KDM2AQ9Y2K7 1162 aa20.83■□□□□ 0.93
GRIN1-201ENST00000350902 SMARCA2P51531 1590 aa20.83■□□□□ 0.93
GRIN1-201ENST00000350902 HSPA5P11021 654 aaKnown RBP20.82■□□□□ 0.92
GRIN1-201ENST00000350902 DEKP35659 375 aaKnown RBP20.82■□□□□ 0.92
GRIN1-201ENST00000350902 FOXD1Q16676 465 aa20.82■□□□□ 0.92
GRIN1-201ENST00000350902 RTN4Q9NQC3 1192 aaKnown RBP20.81■□□□□ 0.92
GRIN1-201ENST00000350902 EIF5BO60841 1220 aaKnown RBP20.8■□□□□ 0.92
GRIN1-201ENST00000350902 NOP58Q9Y2X3 529 aaKnown RBP20.79■□□□□ 0.92
GRIN1-201ENST00000350902 TIMELESSQ9UNS1 1208 aa20.78■□□□□ 0.92
GRIN1-201ENST00000350902 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
GRIN1-201ENST00000350902 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
GRIN1-201ENST00000350902 CUX2O14529 1486 aa20.76■□□□□ 0.91
GRIN1-201ENST00000350902 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
GRIN1-201ENST00000350902 LAS1LQ9Y4W2 734 aaKnown RBP20.75■□□□□ 0.91
GRIN1-201ENST00000350902 ESF1Q9H501 851 aaKnown RBP20.74■□□□□ 0.91
GRIN1-201ENST00000350902 KIF21BO75037 1637 aa20.74■□□□□ 0.91
GRIN1-201ENST00000350902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.74■□□□□ 0.91
GRIN1-201ENST00000350902 CANXP27824 592 aaKnown RBP20.72■□□□□ 0.91
GRIN1-201ENST00000350902 PLEKHD1A6NEE1 506 aa20.68■□□□□ 0.9
GRIN1-201ENST00000350902 STAG3Q9UJ98 1225 aa20.65■□□□□ 0.9
GRIN1-201ENST00000350902 NEFMP07197 916 aa20.65■□□□□ 0.9
GRIN1-201ENST00000350902 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.9
GRIN1-201ENST00000350902 FHAD1B1AJZ9 1412 aa20.63■□□□□ 0.89
GRIN1-201ENST00000350902 ARXQ96QS3 562 aa20.61■□□□□ 0.89
GRIN1-201ENST00000350902 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
GRIN1-201ENST00000350902 ARAP1Q96P48 1450 aa20.59■□□□□ 0.89
GRIN1-201ENST00000350902 L3MBTL2Q969R5 705 aa20.58■□□□□ 0.89
GRIN1-201ENST00000350902 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
GRIN1-201ENST00000350902 FHOD3Q2V2M9 1422 aa20.57■□□□□ 0.88
GRIN1-201ENST00000350902 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
GRIN1-201ENST00000350902 PHLDB1Q86UU1 1377 aa20.55■□□□□ 0.88
GRIN1-201ENST00000350902 RGL3Q3MIN7 710 aa20.54■□□□□ 0.88
GRIN1-201ENST00000350902 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
GRIN1-201ENST00000350902 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
GRIN1-201ENST00000350902 MPHOSPH9Q99550 1183 aa20.51■□□□□ 0.87
GRIN1-201ENST00000350902 MSH5O43196 834 aa20.5■□□□□ 0.87
GRIN1-201ENST00000350902 FANCIQ9NVI1 1328 aa20.5■□□□□ 0.87
GRIN1-201ENST00000350902 ERCC6Q03468 1493 aa20.48■□□□□ 0.87
GRIN1-201ENST00000350902 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
GRIN1-201ENST00000350902 RRBP1Q9P2E9 1410 aaKnown RBP20.48■□□□□ 0.87
GRIN1-201ENST00000350902 ERICH6BQ5W0A0 696 aa20.47■□□□□ 0.87
GRIN1-201ENST00000350902 CCDC184Q52MB2 194 aa20.45■□□□□ 0.86
GRIN1-201ENST00000350902 PLEKHG5O94827 1062 aa20.44■□□□□ 0.86
GRIN1-201ENST00000350902 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
GRIN1-201ENST00000350902 RGS3P49796 1198 aa20.41■□□□□ 0.86
GRIN1-201ENST00000350902 CC2D1BQ5T0F9 858 aaKnown RBP20.41■□□□□ 0.86
GRIN1-201ENST00000350902 IPO9Q96P70 1041 aaKnown RBP20.41■□□□□ 0.86
GRIN1-201ENST00000350902 WASHC2AQ641Q2 1341 aa20.41■□□□□ 0.86
GRIN1-201ENST00000350902 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
GRIN1-201ENST00000350902 NUDCQ9Y266 331 aa20.39■□□□□ 0.85
GRIN1-201ENST00000350902 IGF1RP08069 1367 aa20.39■□□□□ 0.85
GRIN1-201ENST00000350902 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.37■□□□□ 0.85
GRIN1-201ENST00000350902 FMN1Q68DA7 1419 aa20.37■□□□□ 0.85
GRIN1-201ENST00000350902 CCDC18Q5T9S5 1454 aa20.35■□□□□ 0.85
GRIN1-201ENST00000350902 PAK3O75914 559 aaPredicted RBP20.35■□□□□ 0.85
GRIN1-201ENST00000350902 DCAF11Q8TEB1 546 aa20.35■□□□□ 0.85
GRIN1-201ENST00000350902 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
GRIN1-201ENST00000350902 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
GRIN1-201ENST00000350902 ZBED9Q6R2W3 1325 aa20.33■□□□□ 0.84
GRIN1-201ENST00000350902 LRRC9Q6ZRR7 1453 aa20.32■□□□□ 0.84
GRIN1-201ENST00000350902 PKD2Q13563 968 aa20.32■□□□□ 0.84
GRIN1-201ENST00000350902 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
GRIN1-201ENST00000350902 DDRGK1Q96HY6 314 aa20.32■□□□□ 0.84
GRIN1-201ENST00000350902 RCAN3Q9UKA8 241 aa20.32■□□□□ 0.84
GRIN1-201ENST00000350902 PDS5BQ9NTI5 1447 aa20.32■□□□□ 0.84
GRIN1-201ENST00000350902 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.3■□□□□ 0.84
GRIN1-201ENST00000350902 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
GRIN1-201ENST00000350902 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
GRIN1-201ENST00000350902 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.83
GRIN1-201ENST00000350902 SLC4A3P48751 1232 aa20.26■□□□□ 0.83
GRIN1-201ENST00000350902 PLIN1O60240 522 aa20.26■□□□□ 0.83
GRIN1-201ENST00000350902 UPF2Q9HAU5 1272 aaKnown RBP20.24■□□□□ 0.83
GRIN1-201ENST00000350902 KIF7Q2M1P5 1343 aa20.22■□□□□ 0.83
GRIN1-201ENST00000350902 NEUROD2Q15784 382 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms