RNA–Protein interactions for RNA: ENST00000350796.7

CYTH3-201, Transcript of cytohesin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CYTH3, Length 4,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-201ENST00000350796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.85
CYTH3-201ENST00000350796 KDM2AQ9Y2K7 1162 aa20.37■□□□□ 0.85
CYTH3-201ENST00000350796 KANK4Q5T7N3 995 aaPredicted RBP20.36■□□□□ 0.85
CYTH3-201ENST00000350796 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
CYTH3-201ENST00000350796 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
CYTH3-201ENST00000350796 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
CYTH3-201ENST00000350796 BCL11AQ9H165 835 aa20.27■□□□□ 0.84
CYTH3-201ENST00000350796 MRS2Q9HD23 443 aa20.26■□□□□ 0.83
CYTH3-201ENST00000350796 CHGAP10645 457 aaKnown RBP20.24■□□□□ 0.83
CYTH3-201ENST00000350796 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
CYTH3-201ENST00000350796 TSPY4P0CV99 314 aa20.22■□□□□ 0.83
CYTH3-201ENST00000350796 TSPY10P0CW01 314 aa20.22■□□□□ 0.83
CYTH3-201ENST00000350796 CUX2O14529 1486 aa20.2■□□□□ 0.82
CYTH3-201ENST00000350796 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
CYTH3-201ENST00000350796 EIF4G2P78344 907 aaKnown RBP eCLIP20.18■□□□□ 0.823e-6■■■■■ 32.5
CYTH3-201ENST00000350796 NPM2Q86SE8 214 aaKnown RBP20.18■□□□□ 0.82
CYTH3-201ENST00000350796 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
CYTH3-201ENST00000350796 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
CYTH3-201ENST00000350796 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
CYTH3-201ENST00000350796 NCAPD3P42695 1498 aa20.18■□□□□ 0.82
CYTH3-201ENST00000350796 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
CYTH3-201ENST00000350796 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
CYTH3-201ENST00000350796 KCNH8Q96L42 1107 aa20.15■□□□□ 0.82
CYTH3-201ENST00000350796 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.82
CYTH3-201ENST00000350796 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
CYTH3-201ENST00000350796 CANXP27824 592 aaKnown RBP20.12■□□□□ 0.81
CYTH3-201ENST00000350796 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
CYTH3-201ENST00000350796 CFDP1Q9UEE9 299 aaPredicted RBP20.08■□□□□ 0.8
CYTH3-201ENST00000350796 KIF21BO75037 1637 aa20.08■□□□□ 0.8
CYTH3-201ENST00000350796 TOP2BQ02880 1626 aa20.07■□□□□ 0.8
CYTH3-201ENST00000350796 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
CYTH3-201ENST00000350796 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
CYTH3-201ENST00000350796 SUPT16HQ9Y5B9 1047 aaKnown RBP20.02■□□□□ 0.8
CYTH3-201ENST00000350796 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
CYTH3-201ENST00000350796 FOXD1Q16676 465 aa20.02■□□□□ 0.79
CYTH3-201ENST00000350796 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
CYTH3-201ENST00000350796 ANP32AP39687 249 aaKnown RBP19.99■□□□□ 0.79
CYTH3-201ENST00000350796 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
CYTH3-201ENST00000350796 SLC24A1O60721 1099 aa19.97■□□□□ 0.79
CYTH3-201ENST00000350796 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
CYTH3-201ENST00000350796 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
CYTH3-201ENST00000350796 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
CYTH3-201ENST00000350796 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.78
CYTH3-201ENST00000350796 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.78
CYTH3-201ENST00000350796 STAG3Q9UJ98 1225 aa19.89■□□□□ 0.77
CYTH3-201ENST00000350796 CFTRP13569 1480 aa19.88■□□□□ 0.77
CYTH3-201ENST00000350796 NBR1Q14596 966 aa19.86■□□□□ 0.77
CYTH3-201ENST00000350796 NEFMP07197 916 aa19.84■□□□□ 0.77
CYTH3-201ENST00000350796 WDR43Q15061 677 aaKnown RBP eCLIP19.84■□□□□ 0.77
CYTH3-201ENST00000350796 FHOD3Q2V2M9 1422 aa19.83■□□□□ 0.76
CYTH3-201ENST00000350796 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
CYTH3-201ENST00000350796 ZBTB47Q9UFB7 747 aaPredicted RBP19.8■□□□□ 0.76
CYTH3-201ENST00000350796 HSPA5P11021 654 aaKnown RBP19.8■□□□□ 0.76
CYTH3-201ENST00000350796 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
CYTH3-201ENST00000350796 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.76
CYTH3-201ENST00000350796 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
CYTH3-201ENST00000350796 ESF1Q9H501 851 aaKnown RBP19.77■□□□□ 0.75
CYTH3-201ENST00000350796 CUX1P39880 1505 aa19.76■□□□□ 0.75
CYTH3-201ENST00000350796 PPP1R15AO75807 674 aaPredicted RBP19.75■□□□□ 0.75
CYTH3-201ENST00000350796 DHX57Q6P158 1386 aaKnown RBP19.74■□□□□ 0.75
CYTH3-201ENST00000350796 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
CYTH3-201ENST00000350796 B4GALNT3Q6L9W6 998 aa19.74■□□□□ 0.75
CYTH3-201ENST00000350796 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
CYTH3-201ENST00000350796 PKD2Q13563 968 aa19.71■□□□□ 0.75
CYTH3-201ENST00000350796 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
CYTH3-201ENST00000350796 MPHOSPH9Q99550 1183 aa19.71■□□□□ 0.75
CYTH3-201ENST00000350796 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
CYTH3-201ENST00000350796 NEUROD2Q15784 382 aa19.67■□□□□ 0.74
CYTH3-201ENST00000350796 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
CYTH3-201ENST00000350796 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
CYTH3-201ENST00000350796 TNNT2P45379 298 aaPredicted RBP19.65■□□□□ 0.74
CYTH3-201ENST00000350796 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.74
CYTH3-201ENST00000350796 FMN1Q68DA7 1419 aa19.62■□□□□ 0.73
CYTH3-201ENST00000350796 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.61■□□□□ 0.73
CYTH3-201ENST00000350796 IGF1RP08069 1367 aa19.6■□□□□ 0.73
CYTH3-201ENST00000350796 CCER2I3L3R5 266 aa19.6■□□□□ 0.73
CYTH3-201ENST00000350796 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
CYTH3-201ENST00000350796 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
CYTH3-201ENST00000350796 ARXQ96QS3 562 aa19.57■□□□□ 0.72
CYTH3-201ENST00000350796 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
CYTH3-201ENST00000350796 PPM1GO15355 546 aaPredicted RBP19.55■□□□□ 0.72
CYTH3-201ENST00000350796 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■□□□ 14.5
CYTH3-201ENST00000350796 NUP155O75694 1391 aa19.53■□□□□ 0.72
CYTH3-201ENST00000350796 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.71
CYTH3-201ENST00000350796 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
CYTH3-201ENST00000350796 UPF2Q9HAU5 1272 aaKnown RBP19.51■□□□□ 0.71
CYTH3-201ENST00000350796 HSP90AA1P07900 732 aaKnown RBP19.51■□□□□ 0.71
CYTH3-201ENST00000350796 EIF5BO60841 1220 aaKnown RBP19.5■□□□□ 0.71
CYTH3-201ENST00000350796 ANP32EQ9BTT0 268 aa19.5■□□□□ 0.71
CYTH3-201ENST00000350796 RBM19Q9Y4C8 960 aaKnown RBP19.48■□□□□ 0.71
CYTH3-201ENST00000350796 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
CYTH3-201ENST00000350796 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
CYTH3-201ENST00000350796 RGS3P49796 1198 aa19.47■□□□□ 0.71
CYTH3-201ENST00000350796 LAMC3Q9Y6N6 1575 aa19.47■□□□□ 0.71
CYTH3-201ENST00000350796 FGD5Q6ZNL6 1462 aa19.47■□□□□ 0.71
CYTH3-201ENST00000350796 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
CYTH3-201ENST00000350796 PHLDB1Q86UU1 1377 aa19.46■□□□□ 0.71
CYTH3-201ENST00000350796 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
CYTH3-201ENST00000350796 GLIPR1L2Q4G1C9 344 aa19.45■□□□□ 0.7
CYTH3-201ENST00000350796 CDCA8Q53HL2 280 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms