RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 SHROOM2Q13796 1616 aa21.01■□□□□ 0.95
ERGIC3-202ENST00000348547 IQGAP2Q13576 1575 aa20.99■□□□□ 0.95
ERGIC3-202ENST00000348547 KIAA0586Q9BVV6 1533 aa20.99■□□□□ 0.95
ERGIC3-202ENST00000348547 LOC105371045A0A1W2PR82 267 aa20.97■□□□□ 0.95
ERGIC3-202ENST00000348547 OSCARQ8IYS5 282 aa20.97■□□□□ 0.95
ERGIC3-202ENST00000348547 ERCC6L2Q5T890 1561 aa20.95■□□□□ 0.94
ERGIC3-202ENST00000348547 UGGT2Q9NYU1 1516 aa20.89■□□□□ 0.94
ERGIC3-202ENST00000348547 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
ERGIC3-202ENST00000348547 SAMD9Q5K651 1589 aa20.85■□□□□ 0.93
ERGIC3-202ENST00000348547 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
ERGIC3-202ENST00000348547 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
ERGIC3-202ENST00000348547 KIAA0556O60303 1618 aa20.82■□□□□ 0.92
ERGIC3-202ENST00000348547 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
ERGIC3-202ENST00000348547 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
ERGIC3-202ENST00000348547 ARHGEF11O15085 1522 aa20.81■□□□□ 0.92
ERGIC3-202ENST00000348547 PRG4Q92954 1404 aaPredicted RBP20.81■□□□□ 0.92
ERGIC3-202ENST00000348547 JPH4Q96JJ6 628 aa20.81■□□□□ 0.92
ERGIC3-202ENST00000348547 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
ERGIC3-202ENST00000348547 ARHGAP35Q9NRY4 1499 aa20.77■□□□□ 0.92
ERGIC3-202ENST00000348547 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
ERGIC3-202ENST00000348547 EFCAB5A4FU69 1503 aa20.73■□□□□ 0.91
ERGIC3-202ENST00000348547 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
ERGIC3-202ENST00000348547 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
ERGIC3-202ENST00000348547 ARAP1Q96P48 1450 aa20.71■□□□□ 0.91
ERGIC3-202ENST00000348547 CLIP1P30622 1438 aa20.69■□□□□ 0.9
ERGIC3-202ENST00000348547 FHOD3Q2V2M9 1422 aa20.69■□□□□ 0.9
ERGIC3-202ENST00000348547 P3H3Q8IVL6 736 aa20.65■□□□□ 0.9
ERGIC3-202ENST00000348547 CARMIL2Q6F5E8 1435 aa20.64■□□□□ 0.9
ERGIC3-202ENST00000348547 ABCA8O94911 1581 aa20.58■□□□□ 0.88
ERGIC3-202ENST00000348547 ADCY10Q96PN6 1610 aa20.57■□□□□ 0.88
ERGIC3-202ENST00000348547 PLB1Q6P1J6 1458 aa20.57■□□□□ 0.88
ERGIC3-202ENST00000348547 PTPRGP23470 1445 aa20.56■□□□□ 0.88
ERGIC3-202ENST00000348547 LRRIQ1Q96JM4 1722 aa20.55■□□□□ 0.88
ERGIC3-202ENST00000348547 PCF11O94913 1555 aaKnown RBP20.55■□□□□ 0.88
ERGIC3-202ENST00000348547 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
ERGIC3-202ENST00000348547 RAPGEF6Q8TEU7 1601 aa20.51■□□□□ 0.87
ERGIC3-202ENST00000348547 ABCC2Q92887 1545 aa20.48■□□□□ 0.87
ERGIC3-202ENST00000348547 NUP153P49790 1475 aaKnown RBP20.47■□□□□ 0.87
ERGIC3-202ENST00000348547 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
ERGIC3-202ENST00000348547 UACAQ9BZF9 1416 aa20.46■□□□□ 0.87
ERGIC3-202ENST00000348547 UHRF1BP1LA0JNW5 1464 aa20.46■□□□□ 0.87
ERGIC3-202ENST00000348547 FMN1Q68DA7 1419 aa20.45■□□□□ 0.86
ERGIC3-202ENST00000348547 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
ERGIC3-202ENST00000348547 CASKIN1Q8WXD9 1431 aa20.43■□□□□ 0.86
ERGIC3-202ENST00000348547 ZCCHC11Q5TAX3 1644 aaKnown RBP20.41■□□□□ 0.86
ERGIC3-202ENST00000348547 FYCO1Q9BQS8 1478 aa20.41■□□□□ 0.86
ERGIC3-202ENST00000348547 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
ERGIC3-202ENST00000348547 HECW1Q76N89 1606 aa20.39■□□□□ 0.86
ERGIC3-202ENST00000348547 KDM5BQ9UGL1 1544 aa20.39■□□□□ 0.85
ERGIC3-202ENST00000348547 ATP10BO94823 1461 aa20.36■□□□□ 0.85
ERGIC3-202ENST00000348547 EPRSP07814 1512 aaKnown RBP20.35■□□□□ 0.85
ERGIC3-202ENST00000348547 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
ERGIC3-202ENST00000348547 CFAP43Q8NDM7 1665 aa20.34■□□□□ 0.85
ERGIC3-202ENST00000348547 MAGI3Q5TCQ9 1506 aa20.32■□□□□ 0.84
ERGIC3-202ENST00000348547 TIAM1Q13009 1591 aa20.28■□□□□ 0.84
ERGIC3-202ENST00000348547 MAPKBP1O60336 1514 aa20.26■□□□□ 0.83
ERGIC3-202ENST00000348547 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
ERGIC3-202ENST00000348547 ATP1B4Q9UN42 357 aaPredicted RBP20.22■□□□□ 0.83
ERGIC3-202ENST00000348547 ASXL2Q76L83 1435 aa20.22■□□□□ 0.83
ERGIC3-202ENST00000348547 KIF14Q15058 1648 aa20.2■□□□□ 0.82
ERGIC3-202ENST00000348547 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
ERGIC3-202ENST00000348547 KIF13AQ9H1H9 1805 aa20.18■□□□□ 0.82
ERGIC3-202ENST00000348547 WDR7Q9Y4E6 1490 aa20.17■□□□□ 0.82
ERGIC3-202ENST00000348547 DIP2BQ9P265 1576 aa20.15■□□□□ 0.82
ERGIC3-202ENST00000348547 KANK4Q5T7N3 995 aaPredicted RBP20.14■□□□□ 0.81
ERGIC3-202ENST00000348547 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
ERGIC3-202ENST00000348547 TROQ12816 1431 aaPredicted RBP20.13■□□□□ 0.81
ERGIC3-202ENST00000348547 TTC37Q6PGP7 1564 aa20.12■□□□□ 0.81
ERGIC3-202ENST00000348547 EHBP1L1Q8N3D4 1523 aa20.11■□□□□ 0.81
ERGIC3-202ENST00000348547 ABCC10Q5T3U5 1492 aa20.09■□□□□ 0.81
ERGIC3-202ENST00000348547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.08■□□□□ 0.86e-6■■■■□ 21.5
ERGIC3-202ENST00000348547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.8
ERGIC3-202ENST00000348547 NPM1P06748 294 aaKnown RBP eCLIP20.08■□□□□ 0.8
ERGIC3-202ENST00000348547 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.8
ERGIC3-202ENST00000348547 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
ERGIC3-202ENST00000348547 MAP3K4Q9Y6R4 1608 aa20.06■□□□□ 0.8
ERGIC3-202ENST00000348547 GLI2P10070 1586 aa20.06■□□□□ 0.8
ERGIC3-202ENST00000348547 PPRC1Q5VV67 1664 aaKnown RBP20.05■□□□□ 0.8
ERGIC3-202ENST00000348547 CDC42BPAQ5VT25 1732 aa20.03■□□□□ 0.8
ERGIC3-202ENST00000348547 SUPT6HQ7KZ85 1726 aaKnown RBP20.03■□□□□ 0.8
ERGIC3-202ENST00000348547 PPARGC1BQ86YN6 1023 aaKnown RBP20.03■□□□□ 0.8
ERGIC3-202ENST00000348547 MTUS2Q5JR59 1369 aa20.03■□□□□ 0.8
ERGIC3-202ENST00000348547 PLEKHD1A6NEE1 506 aa20.02■□□□□ 0.8
ERGIC3-202ENST00000348547 NCOA2Q15596 1464 aa20.01■□□□□ 0.79
ERGIC3-202ENST00000348547 KCNH8Q96L42 1107 aa20.01■□□□□ 0.79
ERGIC3-202ENST00000348547 CDC42BPBQ9Y5S2 1711 aa19.99■□□□□ 0.79
ERGIC3-202ENST00000348547 MYO5CQ9NQX4 1742 aa19.98■□□□□ 0.79
ERGIC3-202ENST00000348547 PREX2Q70Z35 1606 aa19.98■□□□□ 0.79
ERGIC3-202ENST00000348547 TSPOAP1O95153 1857 aa19.98■□□□□ 0.79
ERGIC3-202ENST00000348547 CDK11AQ9UQ88 783 aaPredicted RBP19.97■□□□□ 0.79
ERGIC3-202ENST00000348547 GPATCH8Q9UKJ3 1502 aaKnown RBP19.94■□□□□ 0.78
ERGIC3-202ENST00000348547 PHLDB1Q86UU1 1377 aa19.94■□□□□ 0.78
ERGIC3-202ENST00000348547 FAM69CQ0P6D2 419 aa19.93■□□□□ 0.78
ERGIC3-202ENST00000348547 APLP2Q06481 763 aa19.92■□□□□ 0.78
ERGIC3-202ENST00000348547 ITSN2Q9NZM3 1697 aa19.9■□□□□ 0.78
ERGIC3-202ENST00000348547 CD109Q6YHK3 1445 aa19.9■□□□□ 0.78
ERGIC3-202ENST00000348547 PLCH2O75038 1416 aa19.88■□□□□ 0.77
ERGIC3-202ENST00000348547 ARAP3Q8WWN8 1544 aa19.88■□□□□ 0.77
ERGIC3-202ENST00000348547 SAMD9LQ8IVG5 1584 aa19.87■□□□□ 0.77
ERGIC3-202ENST00000348547 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms