RNA–Protein interactions for RNA: ENST00000346623.6

ALDH1A3-202, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best) BASIC

Gene ALDH1A3, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-202ENST00000346623 NEUROD1Q13562 356 aa21.37■■□□□ 1.01
ALDH1A3-202ENST00000346623 RRBP1Q9P2E9 1410 aaKnown RBP21.34■■□□□ 1.01
ALDH1A3-202ENST00000346623 PHLDB1Q86UU1 1377 aa21.33■■□□□ 1.01
ALDH1A3-202ENST00000346623 ARID3CA6NKF2 412 aa21.31■■□□□ 1
ALDH1A3-202ENST00000346623 MIER1Q8N108 512 aa21.31■■□□□ 1
ALDH1A3-202ENST00000346623 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
ALDH1A3-202ENST00000346623 TIAM1Q13009 1591 aa21.28■■□□□ 1
ALDH1A3-202ENST00000346623 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
ALDH1A3-202ENST00000346623 LRRC9Q6ZRR7 1453 aa21.27■□□□□ 0.99
ALDH1A3-202ENST00000346623 PCF11O94913 1555 aaKnown RBP21.26■□□□□ 0.99
ALDH1A3-202ENST00000346623 GAPVD1Q14C86 1478 aa21.24■□□□□ 0.99
ALDH1A3-202ENST00000346623 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
ALDH1A3-202ENST00000346623 FHAD1B1AJZ9 1412 aa21.22■□□□□ 0.99
ALDH1A3-202ENST00000346623 KIF21AQ7Z4S6 1674 aa21.22■□□□□ 0.99
ALDH1A3-202ENST00000346623 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
ALDH1A3-202ENST00000346623 AQRO60306 1485 aaKnown RBP eCLIP21.21■□□□□ 0.99
ALDH1A3-202ENST00000346623 SIN3AQ96ST3 1273 aa21.18■□□□□ 0.98
ALDH1A3-202ENST00000346623 GTF3C3Q9Y5Q9 886 aa21.11■□□□□ 0.97
ALDH1A3-202ENST00000346623 CUL7Q14999 1698 aa21.11■□□□□ 0.97
ALDH1A3-202ENST00000346623 MTUS2Q5JR59 1369 aa21.1■□□□□ 0.97
ALDH1A3-202ENST00000346623 CASKIN1Q8WXD9 1431 aa21.09■□□□□ 0.97
ALDH1A3-202ENST00000346623 CENPBP07199 599 aaPredicted RBP21.08■□□□□ 0.97
ALDH1A3-202ENST00000346623 WDR97A6NE52 1622 aa21.08■□□□□ 0.97
ALDH1A3-202ENST00000346623 ABCA5Q8WWZ7 1642 aa21.08■□□□□ 0.97
ALDH1A3-202ENST00000346623 SETD5Q9C0A6 1442 aa21.07■□□□□ 0.96
ALDH1A3-202ENST00000346623 CLSPNQ9HAW4 1339 aa21.07■□□□□ 0.96
ALDH1A3-202ENST00000346623 CTTNBP2Q8WZ74 1663 aa21.06■□□□□ 0.96
ALDH1A3-202ENST00000346623 MAP3K1Q13233 1512 aa21.05■□□□□ 0.96
ALDH1A3-202ENST00000346623 FYCO1Q9BQS8 1478 aa21.05■□□□□ 0.96
ALDH1A3-202ENST00000346623 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
ALDH1A3-202ENST00000346623 HIRIP3Q9BW71 556 aaPredicted RBP21.04■□□□□ 0.96
ALDH1A3-202ENST00000346623 ZNF608Q9ULD9 1512 aaPredicted RBP21.03■□□□□ 0.96
ALDH1A3-202ENST00000346623 EFCAB5A4FU69 1503 aa21.02■□□□□ 0.96
ALDH1A3-202ENST00000346623 CHIC2Q9UKJ5 165 aa21.02■□□□□ 0.96
ALDH1A3-202ENST00000346623 TARBP1Q13395 1621 aaKnown RBP21.01■□□□□ 0.95
ALDH1A3-202ENST00000346623 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
ALDH1A3-202ENST00000346623 FBLN2P98095 1184 aa21■□□□□ 0.95
ALDH1A3-202ENST00000346623 CFAP43Q8NDM7 1665 aa21■□□□□ 0.95
ALDH1A3-202ENST00000346623 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
ALDH1A3-202ENST00000346623 PTPRKQ15262 1439 aa20.95■□□□□ 0.94
ALDH1A3-202ENST00000346623 FGD6Q6ZV73 1430 aa20.95■□□□□ 0.94
ALDH1A3-202ENST00000346623 RRP7BPQ9NSQ0 103 aa20.95■□□□□ 0.94
ALDH1A3-202ENST00000346623 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
ALDH1A3-202ENST00000346623 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
ALDH1A3-202ENST00000346623 NCOA2Q15596 1464 aa20.9■□□□□ 0.94
ALDH1A3-202ENST00000346623 SAMD9Q5K651 1589 aa20.9■□□□□ 0.94
ALDH1A3-202ENST00000346623 GRIN2BQ13224 1484 aa20.89■□□□□ 0.93
ALDH1A3-202ENST00000346623 MAGI3Q5TCQ9 1506 aa20.87■□□□□ 0.93
ALDH1A3-202ENST00000346623 ERCC6Q03468 1493 aa20.86■□□□□ 0.93
ALDH1A3-202ENST00000346623 KCNH8Q96L42 1107 aa20.86■□□□□ 0.93
ALDH1A3-202ENST00000346623 CDK13Q14004 1512 aaKnown RBP20.86■□□□□ 0.93
ALDH1A3-202ENST00000346623 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
ALDH1A3-202ENST00000346623 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.92
ALDH1A3-202ENST00000346623 CHMP7Q8WUX9 453 aaPredicted RBP20.82■□□□□ 0.92
ALDH1A3-202ENST00000346623 MYOM3Q5VTT5 1437 aa20.82■□□□□ 0.92
ALDH1A3-202ENST00000346623 IQGAP2Q13576 1575 aa20.8■□□□□ 0.92
ALDH1A3-202ENST00000346623 TRIM52Q96A61 297 aa20.8■□□□□ 0.92
ALDH1A3-202ENST00000346623 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
ALDH1A3-202ENST00000346623 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
ALDH1A3-202ENST00000346623 CCDC18Q5T9S5 1454 aa20.78■□□□□ 0.92
ALDH1A3-202ENST00000346623 FOXD1Q16676 465 aa20.78■□□□□ 0.92
ALDH1A3-202ENST00000346623 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
ALDH1A3-202ENST00000346623 EPRSP07814 1512 aaKnown RBP20.75■□□□□ 0.91
ALDH1A3-202ENST00000346623 PPP1R15AO75807 674 aaPredicted RBP20.74■□□□□ 0.91
ALDH1A3-202ENST00000346623 NAIPQ13075 1403 aa20.73■□□□□ 0.91
ALDH1A3-202ENST00000346623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.91
ALDH1A3-202ENST00000346623 SUPT6HQ7KZ85 1726 aaKnown RBP20.71■□□□□ 0.91
ALDH1A3-202ENST00000346623 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
ALDH1A3-202ENST00000346623 EHBP1L1Q8N3D4 1523 aa20.7■□□□□ 0.9
ALDH1A3-202ENST00000346623 HFM1A2PYH4 1435 aa20.7■□□□□ 0.9
ALDH1A3-202ENST00000346623 ZNF777Q9ULD5 760 aaPredicted RBP20.7■□□□□ 0.9
ALDH1A3-202ENST00000346623 TONSLQ96HA7 1378 aa20.69■□□□□ 0.9
ALDH1A3-202ENST00000346623 WDR62O43379 1518 aa20.69■□□□□ 0.9
ALDH1A3-202ENST00000346623 UGGT2Q9NYU1 1516 aa20.69■□□□□ 0.9
ALDH1A3-202ENST00000346623 PTPN23Q9H3S7 1636 aa20.68■□□□□ 0.9
ALDH1A3-202ENST00000346623 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
ALDH1A3-202ENST00000346623 DISP1Q96F81 1524 aa20.66■□□□□ 0.9
ALDH1A3-202ENST00000346623 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
ALDH1A3-202ENST00000346623 HECW1Q76N89 1606 aa20.64■□□□□ 0.9
ALDH1A3-202ENST00000346623 KIAA0586Q9BVV6 1533 aa20.64■□□□□ 0.89
ALDH1A3-202ENST00000346623 UACAQ9BZF9 1416 aa20.64■□□□□ 0.89
ALDH1A3-202ENST00000346623 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
ALDH1A3-202ENST00000346623 PLB1Q6P1J6 1458 aa20.61■□□□□ 0.89
ALDH1A3-202ENST00000346623 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
ALDH1A3-202ENST00000346623 KDM6BO15054 1643 aa20.61■□□□□ 0.89
ALDH1A3-202ENST00000346623 NUP153P49790 1475 aaKnown RBP20.6■□□□□ 0.89
ALDH1A3-202ENST00000346623 ARHGEF11O15085 1522 aa20.59■□□□□ 0.89
ALDH1A3-202ENST00000346623 MPHOSPH9Q99550 1183 aa20.57■□□□□ 0.88
ALDH1A3-202ENST00000346623 KIAA0556O60303 1618 aa20.57■□□□□ 0.88
ALDH1A3-202ENST00000346623 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
ALDH1A3-202ENST00000346623 CDK11AQ9UQ88 783 aaPredicted RBP20.54■□□□□ 0.88
ALDH1A3-202ENST00000346623 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
ALDH1A3-202ENST00000346623 TIMELESSQ9UNS1 1208 aa20.53■□□□□ 0.88
ALDH1A3-202ENST00000346623 DENND4BO75064 1496 aaPredicted RBP20.51■□□□□ 0.87
ALDH1A3-202ENST00000346623 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
ALDH1A3-202ENST00000346623 TCOF1Q13428 1488 aaKnown RBP20.49■□□□□ 0.87
ALDH1A3-202ENST00000346623 L3MBTL2Q969R5 705 aa20.48■□□□□ 0.87
ALDH1A3-202ENST00000346623 SLC4A1APQ9BWU0 796 aaKnown RBP20.48■□□□□ 0.87
ALDH1A3-202ENST00000346623 ABCC5O15440 1437 aa20.47■□□□□ 0.87
ALDH1A3-202ENST00000346623 RAPGEF6Q8TEU7 1601 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms