RNA–Protein interactions for RNA: ENST00000344850.8

GTDC1-202, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-202ENST00000344850 SHROOM2Q13796 1616 aa7.88□□□□□ -1.15
GTDC1-202ENST00000344850 SYNJ2O15056 1496 aa7.88□□□□□ -1.15
GTDC1-202ENST00000344850 POLA1P09884 1462 aaPredicted RBP7.86□□□□□ -1.15
GTDC1-202ENST00000344850 GRIN2BQ13224 1484 aa7.86□□□□□ -1.15
GTDC1-202ENST00000344850 TIMELESSQ9UNS1 1208 aa7.85□□□□□ -1.15
GTDC1-202ENST00000344850 CYB5RLQ6IPT4 315 aa7.83□□□□□ -1.16
GTDC1-202ENST00000344850 RNF216Q9NWF9 866 aaPredicted RBP7.83□□□□□ -1.16
GTDC1-202ENST00000344850 CCDC88BA6NC98 1476 aa7.83□□□□□ -1.16
GTDC1-202ENST00000344850 PBRM1Q86U86 1689 aa7.82□□□□□ -1.16
GTDC1-202ENST00000344850 GAPVD1Q14C86 1478 aa7.82□□□□□ -1.16
GTDC1-202ENST00000344850 MYCNP04198 464 aaPredicted RBP7.82□□□□□ -1.16
GTDC1-202ENST00000344850 SLC4A2P04920 1241 aa7.82□□□□□ -1.16
GTDC1-202ENST00000344850 KIF13AQ9H1H9 1805 aa7.81□□□□□ -1.16
GTDC1-202ENST00000344850 SNAPC4Q5SXM2 1469 aa7.81□□□□□ -1.16
GTDC1-202ENST00000344850 ABCA5Q8WWZ7 1642 aa7.81□□□□□ -1.16
GTDC1-202ENST00000344850 MAPKBP1O60336 1514 aa7.81□□□□□ -1.16
GTDC1-202ENST00000344850 AQRO60306 1485 aaKnown RBP eCLIP7.8□□□□□ -1.16
GTDC1-202ENST00000344850 TRHP20396 242 aaPredicted RBP7.8□□□□□ -1.16
GTDC1-202ENST00000344850 NUP160Q12769 1436 aa7.79□□□□□ -1.16
GTDC1-202ENST00000344850 TULP1O00294 542 aaPredicted RBP7.78□□□□□ -1.16
GTDC1-202ENST00000344850 SOGA1O94964 1423 aa7.77□□□□□ -1.16
GTDC1-202ENST00000344850 ABCA10Q8WWZ4 1543 aa7.77□□□□□ -1.17
GTDC1-202ENST00000344850 ERCC6L2Q5T890 1561 aa7.77□□□□□ -1.17
GTDC1-202ENST00000344850 ERICH6Q7L0X2 663 aa7.75□□□□□ -1.17
GTDC1-202ENST00000344850 KDM2AQ9Y2K7 1162 aa7.75□□□□□ -1.17
GTDC1-202ENST00000344850 CEP170Q5SW79 1584 aa7.75□□□□□ -1.17
GTDC1-202ENST00000344850 ABCC10Q5T3U5 1492 aa7.74□□□□□ -1.17
GTDC1-202ENST00000344850 ADAMTS12P58397 1594 aa7.74□□□□□ -1.17
GTDC1-202ENST00000344850 FGD5Q6ZNL6 1462 aa7.73□□□□□ -1.17
GTDC1-202ENST00000344850 FBXO3Q9UK99 471 aa7.73□□□□□ -1.17
GTDC1-202ENST00000344850 GLI2P10070 1586 aa7.72□□□□□ -1.17
GTDC1-202ENST00000344850 GRIN2AQ12879 1464 aa7.72□□□□□ -1.17
GTDC1-202ENST00000344850 DIP2BQ9P265 1576 aa7.71□□□□□ -1.17
GTDC1-202ENST00000344850 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.17
GTDC1-202ENST00000344850 ERICH3Q5RHP9 1530 aa7.71□□□□□ -1.17
GTDC1-202ENST00000344850 CUX1P39880 1505 aa7.71□□□□□ -1.18
GTDC1-202ENST00000344850 RAD54L2Q9Y4B4 1467 aa7.7□□□□□ -1.18
GTDC1-202ENST00000344850 MAPK8IP2Q13387 824 aaPredicted RBP7.68□□□□□ -1.18
GTDC1-202ENST00000344850 FHAD1B1AJZ9 1412 aa7.68□□□□□ -1.18
GTDC1-202ENST00000344850 CHMP7Q8WUX9 453 aaPredicted RBP7.68□□□□□ -1.18
GTDC1-202ENST00000344850 FBLN2P98095 1184 aa7.67□□□□□ -1.18
GTDC1-202ENST00000344850 HOMEZQ8IX15 550 aa7.67□□□□□ -1.18
GTDC1-202ENST00000344850 BIVM-ERCC5R4GMW8 1640 aa7.67□□□□□ -1.18
GTDC1-202ENST00000344850 KDM6BO15054 1643 aa7.66□□□□□ -1.18
GTDC1-202ENST00000344850 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.65□□□□□ -1.18
GTDC1-202ENST00000344850 TDRD9Q8NDG6 1382 aaKnown RBP7.65□□□□□ -1.18
GTDC1-202ENST00000344850 BBXQ8WY36 941 aaPredicted RBP7.64□□□□□ -1.19
GTDC1-202ENST00000344850 RUSC2Q8N2Y8 1516 aa7.63□□□□□ -1.19
GTDC1-202ENST00000344850 TOP2BQ02880 1626 aa7.62□□□□□ -1.19
GTDC1-202ENST00000344850 UHRF1BP1LA0JNW5 1464 aa7.62□□□□□ -1.19
GTDC1-202ENST00000344850 KIAA0586Q9BVV6 1533 aa7.61□□□□□ -1.19
GTDC1-202ENST00000344850 PKD2Q13563 968 aa7.61□□□□□ -1.19
GTDC1-202ENST00000344850 ADCY10Q96PN6 1610 aa7.61□□□□□ -1.19
GTDC1-202ENST00000344850 PPRC1Q5VV67 1664 aaKnown RBP7.61□□□□□ -1.19
GTDC1-202ENST00000344850 HOXD11P31277 338 aaPredicted RBP7.6□□□□□ -1.19
GTDC1-202ENST00000344850 ILDR1Q86SU0 546 aaPredicted RBP7.6□□□□□ -1.19
GTDC1-202ENST00000344850 KDM4FA0A1W2PPD8 638 aa7.6□□□□□ -1.19
GTDC1-202ENST00000344850 VASPP50552 380 aaPredicted RBP7.6□□□□□ -1.19
GTDC1-202ENST00000344850 PAXIP1Q6ZW49 1069 aaPredicted RBP7.59□□□□□ -1.19
GTDC1-202ENST00000344850 WRNQ14191 1432 aaPredicted RBP eCLIP7.58□□□□□ -1.2
GTDC1-202ENST00000344850 PLB1Q6P1J6 1458 aa7.58□□□□□ -1.2
GTDC1-202ENST00000344850 MAP3K4Q9Y6R4 1608 aa7.57□□□□□ -1.2
GTDC1-202ENST00000344850 PRG4Q92954 1404 aaPredicted RBP7.56□□□□□ -1.2
GTDC1-202ENST00000344850 TEX14Q8IWB6 1497 aa7.56□□□□□ -1.2
GTDC1-202ENST00000344850 HECW2Q9P2P5 1572 aa7.56□□□□□ -1.2
GTDC1-202ENST00000344850 CUL7Q14999 1698 aa7.55□□□□□ -1.2
GTDC1-202ENST00000344850 TMEM132AQ24JP5 1023 aa7.55□□□□□ -1.2
GTDC1-202ENST00000344850 IFNLR1Q8IU57 520 aaPredicted RBP7.55□□□□□ -1.2
GTDC1-202ENST00000344850 CFAP44Q96MT7 982 aa7.55□□□□□ -1.2
GTDC1-202ENST00000344850 ADGRL1O94910 1474 aa7.55□□□□□ -1.2
GTDC1-202ENST00000344850 ATF5Q9Y2D1 282 aaPredicted RBP7.55□□□□□ -1.2
GTDC1-202ENST00000344850 ABCC2Q92887 1545 aa7.53□□□□□ -1.2
GTDC1-202ENST00000344850 NBR1Q14596 966 aa7.52□□□□□ -1.21
GTDC1-202ENST00000344850 FBXO41Q8TF61 875 aa7.52□□□□□ -1.21
GTDC1-202ENST00000344850 NPM1P06748 294 aaKnown RBP eCLIP7.51□□□□□ -1.21
GTDC1-202ENST00000344850 MAGI3Q5TCQ9 1506 aa7.5□□□□□ -1.21
GTDC1-202ENST00000344850 TSHZ2Q9NRE2 1034 aa7.5□□□□□ -1.21
GTDC1-202ENST00000344850 PROM2Q8N271 834 aa7.49□□□□□ -1.21
GTDC1-202ENST00000344850 KDM5BQ9UGL1 1544 aa7.49□□□□□ -1.21
GTDC1-202ENST00000344850 CFAP43Q8NDM7 1665 aa7.49□□□□□ -1.21
GTDC1-202ENST00000344850 PHLDB1Q86UU1 1377 aa7.49□□□□□ -1.21
GTDC1-202ENST00000344850 FAM69CQ0P6D2 419 aa7.49□□□□□ -1.21
GTDC1-202ENST00000344850 C14orf37Q86TY3 774 aa7.48□□□□□ -1.21
GTDC1-202ENST00000344850 JPH4Q96JJ6 628 aa7.48□□□□□ -1.21
GTDC1-202ENST00000344850 SPRYD3Q8NCJ5 442 aa7.48□□□□□ -1.21
GTDC1-202ENST00000344850 SPDYE4A6NLX3 237 aa7.47□□□□□ -1.21
GTDC1-202ENST00000344850 EPRSP07814 1512 aaKnown RBP7.46□□□□□ -1.21
GTDC1-202ENST00000344850 ADAMTSL3P82987 1691 aa7.46□□□□□ -1.22
GTDC1-202ENST00000344850 TNIKQ9UKE5 1360 aa7.45□□□□□ -1.22
GTDC1-202ENST00000344850 ARAP3Q8WWN8 1544 aa7.45□□□□□ -1.22
GTDC1-202ENST00000344850 DMRT2Q9Y5R5 561 aa7.44□□□□□ -1.22
GTDC1-202ENST00000344850 MSH5O43196 834 aa7.44□□□□□ -1.22
GTDC1-202ENST00000344850 CARMIL2Q6F5E8 1435 aa7.44□□□□□ -1.22
GTDC1-202ENST00000344850 ASXL2Q76L83 1435 aa7.44□□□□□ -1.22
GTDC1-202ENST00000344850 UGGT2Q9NYU1 1516 aa7.44□□□□□ -1.22
GTDC1-202ENST00000344850 RANGAP1P46060 587 aaPredicted RBP7.43□□□□□ -1.22
GTDC1-202ENST00000344850 TSPOAP1O95153 1857 aa7.42□□□□□ -1.22
GTDC1-202ENST00000344850 UACAQ9BZF9 1416 aa7.41□□□□□ -1.22
GTDC1-202ENST00000344850 ECM2O94769 699 aaPredicted RBP7.41□□□□□ -1.22
GTDC1-202ENST00000344850 PTPRGP23470 1445 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms