RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.49
GDNF-202ENST00000344622 FBLN2P98095 1184 aa11.96□□□□□ -0.49
GDNF-202ENST00000344622 TNIKQ9UKE5 1360 aa11.96□□□□□ -0.49
GDNF-202ENST00000344622 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
GDNF-202ENST00000344622 ARHGAP35Q9NRY4 1499 aa11.94□□□□□ -0.5
GDNF-202ENST00000344622 LRRIQ1Q96JM4 1722 aa11.93□□□□□ -0.5
GDNF-202ENST00000344622 NUP160Q12769 1436 aa11.92□□□□□ -0.5
GDNF-202ENST00000344622 P3H3Q8IVL6 736 aa11.9□□□□□ -0.51
GDNF-202ENST00000344622 CHMP7Q8WUX9 453 aaPredicted RBP11.89□□□□□ -0.51
GDNF-202ENST00000344622 DISP1Q96F81 1524 aa11.89□□□□□ -0.51
GDNF-202ENST00000344622 SAMD9Q5K651 1589 aa11.89□□□□□ -0.51
GDNF-202ENST00000344622 IQGAP2Q13576 1575 aa11.88□□□□□ -0.51
GDNF-202ENST00000344622 CLASP1Q7Z460 1538 aa11.88□□□□□ -0.51
GDNF-202ENST00000344622 CLIP1P30622 1438 aa11.86□□□□□ -0.51
GDNF-202ENST00000344622 FHOD3Q2V2M9 1422 aa11.86□□□□□ -0.51
GDNF-202ENST00000344622 PPARGC1BQ86YN6 1023 aaKnown RBP11.85□□□□□ -0.51
GDNF-202ENST00000344622 SHROOM2Q13796 1616 aa11.85□□□□□ -0.51
GDNF-202ENST00000344622 KIAA0586Q9BVV6 1533 aa11.84□□□□□ -0.51
GDNF-202ENST00000344622 KIAA0556O60303 1618 aa11.82□□□□□ -0.52
GDNF-202ENST00000344622 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
GDNF-202ENST00000344622 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
GDNF-202ENST00000344622 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
GDNF-202ENST00000344622 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
GDNF-202ENST00000344622 PRG4Q92954 1404 aaPredicted RBP11.75□□□□□ -0.53
GDNF-202ENST00000344622 PLB1Q6P1J6 1458 aa11.75□□□□□ -0.53
GDNF-202ENST00000344622 VPS8Q8N3P4 1428 aa11.73□□□□□ -0.53
GDNF-202ENST00000344622 MAGI3Q5TCQ9 1506 aa11.73□□□□□ -0.53
GDNF-202ENST00000344622 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
GDNF-202ENST00000344622 EFCAB5A4FU69 1503 aa11.72□□□□□ -0.53
GDNF-202ENST00000344622 ARID3CA6NKF2 412 aa11.72□□□□□ -0.53
GDNF-202ENST00000344622 CDK13Q14004 1512 aaKnown RBP11.69□□□□□ -0.54
GDNF-202ENST00000344622 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
GDNF-202ENST00000344622 NUP153P49790 1475 aaKnown RBP11.68□□□□□ -0.54
GDNF-202ENST00000344622 RIMBP3CA6NJZ7 1639 aa11.67□□□□□ -0.54
GDNF-202ENST00000344622 RIMBP3BA6NNM3 1639 aa11.67□□□□□ -0.54
GDNF-202ENST00000344622 RIMBP3Q9UFD9 1639 aa11.67□□□□□ -0.54
GDNF-202ENST00000344622 ARHGEF11O15085 1522 aa11.66□□□□□ -0.54
GDNF-202ENST00000344622 ABCA8O94911 1581 aa11.66□□□□□ -0.54
GDNF-202ENST00000344622 ADCY10Q96PN6 1610 aa11.66□□□□□ -0.54
GDNF-202ENST00000344622 RAPGEF6Q8TEU7 1601 aa11.65□□□□□ -0.54
GDNF-202ENST00000344622 CFAP43Q8NDM7 1665 aa11.64□□□□□ -0.55
GDNF-202ENST00000344622 TIAM1Q13009 1591 aa11.63□□□□□ -0.55
GDNF-202ENST00000344622 CASKIN1Q8WXD9 1431 aa11.63□□□□□ -0.55
GDNF-202ENST00000344622 EPRSP07814 1512 aaKnown RBP11.61□□□□□ -0.55
GDNF-202ENST00000344622 FYCO1Q9BQS8 1478 aa11.61□□□□□ -0.55
GDNF-202ENST00000344622 ABCC2Q92887 1545 aa11.6□□□□□ -0.55
GDNF-202ENST00000344622 ATP10BO94823 1461 aa11.59□□□□□ -0.55
GDNF-202ENST00000344622 ATP1B4Q9UN42 357 aaPredicted RBP11.58□□□□□ -0.55
GDNF-202ENST00000344622 KIF14Q15058 1648 aa11.58□□□□□ -0.56
GDNF-202ENST00000344622 PTPRGP23470 1445 aa11.58□□□□□ -0.56
GDNF-202ENST00000344622 FMN1Q68DA7 1419 aa11.58□□□□□ -0.56
GDNF-202ENST00000344622 ZCCHC11Q5TAX3 1644 aaKnown RBP11.57□□□□□ -0.56
GDNF-202ENST00000344622 LRRC9Q6ZRR7 1453 aa11.56□□□□□ -0.56
GDNF-202ENST00000344622 CARMIL2Q6F5E8 1435 aa11.56□□□□□ -0.56
GDNF-202ENST00000344622 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
GDNF-202ENST00000344622 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
GDNF-202ENST00000344622 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
GDNF-202ENST00000344622 CYB5RLQ6IPT4 315 aa11.52□□□□□ -0.57
GDNF-202ENST00000344622 PCGF6Q9BYE7 350 aa11.5□□□□□ -0.57
GDNF-202ENST00000344622 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
GDNF-202ENST00000344622 MAP3K1Q13233 1512 aa11.49□□□□□ -0.57
GDNF-202ENST00000344622 TTC37Q6PGP7 1564 aa11.49□□□□□ -0.57
GDNF-202ENST00000344622 CDC42BPAQ5VT25 1732 aa11.48□□□□□ -0.57
GDNF-202ENST00000344622 UHRF1BP1LA0JNW5 1464 aa11.47□□□□□ -0.57
GDNF-202ENST00000344622 CDC42BPBQ9Y5S2 1711 aa11.46□□□□□ -0.57
GDNF-202ENST00000344622 NCOA2Q15596 1464 aa11.46□□□□□ -0.58
GDNF-202ENST00000344622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.44□□□□□ -0.58
GDNF-202ENST00000344622 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
GDNF-202ENST00000344622 ABCC10Q5T3U5 1492 aa11.44□□□□□ -0.58
GDNF-202ENST00000344622 ZNF644Q9H582 1327 aaPredicted RBP11.44□□□□□ -0.58
GDNF-202ENST00000344622 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
GDNF-202ENST00000344622 EHBP1L1Q8N3D4 1523 aa11.42□□□□□ -0.58
GDNF-202ENST00000344622 PTPRKQ15262 1439 aa11.41□□□□□ -0.58
GDNF-202ENST00000344622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.41□□□□□ -0.58
GDNF-202ENST00000344622 HNRNPUL2Q1KMD3 747 aaKnown RBP11.41□□□□□ -0.58
GDNF-202ENST00000344622 ASXL2Q76L83 1435 aa11.4□□□□□ -0.58
GDNF-202ENST00000344622 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
GDNF-202ENST00000344622 TROQ12816 1431 aaPredicted RBP11.4□□□□□ -0.58
GDNF-202ENST00000344622 MTUS2Q5JR59 1369 aa11.4□□□□□ -0.58
GDNF-202ENST00000344622 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
GDNF-202ENST00000344622 GPATCH8Q9UKJ3 1502 aaKnown RBP11.39□□□□□ -0.59
GDNF-202ENST00000344622 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
GDNF-202ENST00000344622 RRBP1Q9P2E9 1410 aaKnown RBP11.38□□□□□ -0.59
GDNF-202ENST00000344622 PPRC1Q5VV67 1664 aaKnown RBP11.37□□□□□ -0.59
GDNF-202ENST00000344622 WDR7Q9Y4E6 1490 aa11.36□□□□□ -0.59
GDNF-202ENST00000344622 ARHGEF12Q9NZN5 1544 aa11.36□□□□□ -0.59
GDNF-202ENST00000344622 PTPN23Q9H3S7 1636 aa11.35□□□□□ -0.59
GDNF-202ENST00000344622 SAMD9LQ8IVG5 1584 aa11.35□□□□□ -0.59
GDNF-202ENST00000344622 PREX2Q70Z35 1606 aa11.35□□□□□ -0.59
GDNF-202ENST00000344622 FGD6Q6ZV73 1430 aa11.35□□□□□ -0.59
GDNF-202ENST00000344622 TSPOAP1O95153 1857 aa11.35□□□□□ -0.59
GDNF-202ENST00000344622 MYOM3Q5VTT5 1437 aa11.34□□□□□ -0.59
GDNF-202ENST00000344622 TRIM26Q12899 539 aaPredicted RBP11.34□□□□□ -0.59
GDNF-202ENST00000344622 ABCA9Q8IUA7 1624 aa11.34□□□□□ -0.59
GDNF-202ENST00000344622 KDM6BO15054 1643 aa11.34□□□□□ -0.59
GDNF-202ENST00000344622 MAPKBP1O60336 1514 aa11.33□□□□□ -0.6
GDNF-202ENST00000344622 DIP2BQ9P265 1576 aa11.33□□□□□ -0.6
GDNF-202ENST00000344622 MYO5CQ9NQX4 1742 aa11.33□□□□□ -0.6
GDNF-202ENST00000344622 APLP2Q06481 763 aa11.33□□□□□ -0.6
GDNF-202ENST00000344622 MAP3K4Q9Y6R4 1608 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms