RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 FBLN2P98095 1184 aa26.03■■□□□ 1.76
CEACAM1-202ENST00000344391 RANGAP1P46060 587 aaPredicted RBP26.03■■□□□ 1.76
CEACAM1-202ENST00000344391 CHD1O14646 1710 aa26■■□□□ 1.75
CEACAM1-202ENST00000344391 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
CEACAM1-202ENST00000344391 NUP160Q12769 1436 aa25.97■■□□□ 1.75
CEACAM1-202ENST00000344391 IQGAP2Q13576 1575 aa25.96■■□□□ 1.75
CEACAM1-202ENST00000344391 KIAA0586Q9BVV6 1533 aa25.96■■□□□ 1.75
CEACAM1-202ENST00000344391 ARHGAP35Q9NRY4 1499 aa25.96■■□□□ 1.75
CEACAM1-202ENST00000344391 EFCAB5A4FU69 1503 aa25.9■■□□□ 1.74
CEACAM1-202ENST00000344391 ARAP1Q96P48 1450 aa25.89■■□□□ 1.74
CEACAM1-202ENST00000344391 SAMD9Q5K651 1589 aa25.86■■□□□ 1.73
CEACAM1-202ENST00000344391 UGGT2Q9NYU1 1516 aa25.85■■□□□ 1.73
CEACAM1-202ENST00000344391 VPS8Q8N3P4 1428 aa25.83■■□□□ 1.73
CEACAM1-202ENST00000344391 P3H3Q8IVL6 736 aa25.77■■□□□ 1.72
CEACAM1-202ENST00000344391 FHOD3Q2V2M9 1422 aa25.76■■□□□ 1.71
CEACAM1-202ENST00000344391 JPH4Q96JJ6 628 aa25.74■■□□□ 1.71
CEACAM1-202ENST00000344391 DISP1Q96F81 1524 aa25.73■■□□□ 1.71
CEACAM1-202ENST00000344391 KIAA0556O60303 1618 aa25.71■■□□□ 1.71
CEACAM1-202ENST00000344391 CLASP1Q7Z460 1538 aa25.71■■□□□ 1.71
CEACAM1-202ENST00000344391 SHROOM2Q13796 1616 aa25.67■■□□□ 1.7
CEACAM1-202ENST00000344391 FMN1Q68DA7 1419 aa25.64■■□□□ 1.7
CEACAM1-202ENST00000344391 CARMIL2Q6F5E8 1435 aa25.63■■□□□ 1.69
CEACAM1-202ENST00000344391 PRG4Q92954 1404 aaPredicted RBP25.6■■□□□ 1.69
CEACAM1-202ENST00000344391 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
CEACAM1-202ENST00000344391 PCF11O94913 1555 aaKnown RBP25.58■■□□□ 1.69
CEACAM1-202ENST00000344391 CASKIN1Q8WXD9 1431 aa25.57■■□□□ 1.68
CEACAM1-202ENST00000344391 FYCO1Q9BQS8 1478 aa25.55■■□□□ 1.68
CEACAM1-202ENST00000344391 APLP2Q06481 763 aa25.52■■□□□ 1.68
CEACAM1-202ENST00000344391 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
CEACAM1-202ENST00000344391 PPARGC1BQ86YN6 1023 aaKnown RBP25.48■■□□□ 1.67
CEACAM1-202ENST00000344391 MAP3K1Q13233 1512 aa25.47■■□□□ 1.67
CEACAM1-202ENST00000344391 TTBK1Q5TCY1 1321 aaPredicted RBP25.44■■□□□ 1.66
CEACAM1-202ENST00000344391 TIAM1Q13009 1591 aa25.44■■□□□ 1.66
CEACAM1-202ENST00000344391 ATP1B4Q9UN42 357 aaPredicted RBP25.44■■□□□ 1.66
CEACAM1-202ENST00000344391 LRRIQ1Q96JM4 1722 aa25.43■■□□□ 1.66
CEACAM1-202ENST00000344391 HECW1Q76N89 1606 aa25.43■■□□□ 1.66
CEACAM1-202ENST00000344391 RAPGEF6Q8TEU7 1601 aa25.42■■□□□ 1.66
CEACAM1-202ENST00000344391 CFAP43Q8NDM7 1665 aa25.42■■□□□ 1.66
CEACAM1-202ENST00000344391 PTPRGP23470 1445 aa25.41■■□□□ 1.66
CEACAM1-202ENST00000344391 PLB1Q6P1J6 1458 aa25.37■■□□□ 1.65
CEACAM1-202ENST00000344391 ABCA8O94911 1581 aa25.36■■□□□ 1.65
CEACAM1-202ENST00000344391 KANK4Q5T7N3 995 aaPredicted RBP25.36■■□□□ 1.65
CEACAM1-202ENST00000344391 CCDC18Q5T9S5 1454 aa25.35■■□□□ 1.65
CEACAM1-202ENST00000344391 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
CEACAM1-202ENST00000344391 EPRSP07814 1512 aaKnown RBP25.33■■□□□ 1.65
CEACAM1-202ENST00000344391 LRRC9Q6ZRR7 1453 aa25.31■■□□□ 1.64
CEACAM1-202ENST00000344391 CDK13Q14004 1512 aaKnown RBP25.27■■□□□ 1.64
CEACAM1-202ENST00000344391 UACAQ9BZF9 1416 aa25.27■■□□□ 1.64
CEACAM1-202ENST00000344391 TRIM26Q12899 539 aaPredicted RBP25.26■■□□□ 1.63
CEACAM1-202ENST00000344391 ARID3CA6NKF2 412 aa25.22■■□□□ 1.63
CEACAM1-202ENST00000344391 ABCC2Q92887 1545 aa25.21■■□□□ 1.63
CEACAM1-202ENST00000344391 MAGI3Q5TCQ9 1506 aa25.19■■□□□ 1.62
CEACAM1-202ENST00000344391 MTUS2Q5JR59 1369 aa25.19■■□□□ 1.62
CEACAM1-202ENST00000344391 UHRF1BP1LA0JNW5 1464 aa25.18■■□□□ 1.62
CEACAM1-202ENST00000344391 EHBP1L1Q8N3D4 1523 aa25.18■■□□□ 1.62
CEACAM1-202ENST00000344391 ATP10BO94823 1461 aa25.18■■□□□ 1.62
CEACAM1-202ENST00000344391 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
CEACAM1-202ENST00000344391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.14■■□□□ 1.61
CEACAM1-202ENST00000344391 HNRNPUL2Q1KMD3 747 aaKnown RBP25.14■■□□□ 1.61
CEACAM1-202ENST00000344391 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
CEACAM1-202ENST00000344391 CDK11AQ9UQ88 783 aaPredicted RBP25.12■■□□□ 1.61
CEACAM1-202ENST00000344391 SUPT6HQ7KZ85 1726 aaKnown RBP25.11■■□□□ 1.61
CEACAM1-202ENST00000344391 ADCY10Q96PN6 1610 aa25.09■■□□□ 1.61
CEACAM1-202ENST00000344391 RIMBP3CA6NJZ7 1639 aa25.08■■□□□ 1.61
CEACAM1-202ENST00000344391 RIMBP3BA6NNM3 1639 aa25.08■■□□□ 1.61
CEACAM1-202ENST00000344391 RIMBP3Q9UFD9 1639 aa25.08■■□□□ 1.61
CEACAM1-202ENST00000344391 KDM5BQ9UGL1 1544 aa25.07■■□□□ 1.6
CEACAM1-202ENST00000344391 TROQ12816 1431 aaPredicted RBP25.06■■□□□ 1.6
CEACAM1-202ENST00000344391 NCOA2Q15596 1464 aa25.05■■□□□ 1.6
CEACAM1-202ENST00000344391 PHLDB1Q86UU1 1377 aa25.05■■□□□ 1.6
CEACAM1-202ENST00000344391 ZCCHC11Q5TAX3 1644 aaKnown RBP25.04■■□□□ 1.6
CEACAM1-202ENST00000344391 PLEKHD1A6NEE1 506 aa25.03■■□□□ 1.6
CEACAM1-202ENST00000344391 RRBP1Q9P2E9 1410 aaKnown RBP25.01■■□□□ 1.59
CEACAM1-202ENST00000344391 KIF14Q15058 1648 aa24.95■■□□□ 1.58
CEACAM1-202ENST00000344391 CCNB3Q8WWL7 1395 aa24.94■■□□□ 1.58
CEACAM1-202ENST00000344391 MYOM3Q5VTT5 1437 aa24.94■■□□□ 1.58
CEACAM1-202ENST00000344391 CYB5RLQ6IPT4 315 aa24.9■■□□□ 1.58
CEACAM1-202ENST00000344391 FGD6Q6ZV73 1430 aa24.9■■□□□ 1.58
CEACAM1-202ENST00000344391 ABCC10Q5T3U5 1492 aa24.88■■□□□ 1.57
CEACAM1-202ENST00000344391 NPM1P06748 294 aaKnown RBP eCLIP24.86■■□□□ 1.57
CEACAM1-202ENST00000344391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.84■■□□□ 1.57
CEACAM1-202ENST00000344391 MIA2Q96PC5 1412 aa24.84■■□□□ 1.57
CEACAM1-202ENST00000344391 ITSN2Q9NZM3 1697 aa24.83■■□□□ 1.57
CEACAM1-202ENST00000344391 WDR7Q9Y4E6 1490 aa24.82■■□□□ 1.56
CEACAM1-202ENST00000344391 GPATCH8Q9UKJ3 1502 aaKnown RBP24.82■■□□□ 1.56
CEACAM1-202ENST00000344391 PTPN23Q9H3S7 1636 aa24.82■■□□□ 1.56
CEACAM1-202ENST00000344391 CDC42BPAQ5VT25 1732 aa24.81■■□□□ 1.56
CEACAM1-202ENST00000344391 ASXL2Q76L83 1435 aa24.81■■□□□ 1.56
CEACAM1-202ENST00000344391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.8■■□□□ 1.56
CEACAM1-202ENST00000344391 FAM50AQ14320 339 aaKnown RBP24.79■■□□□ 1.56
CEACAM1-202ENST00000344391 KCNH8Q96L42 1107 aa24.79■■□□□ 1.56
CEACAM1-202ENST00000344391 TCOF1Q13428 1488 aaKnown RBP24.78■■□□□ 1.56
CEACAM1-202ENST00000344391 TTC37Q6PGP7 1564 aa24.77■■□□□ 1.56
CEACAM1-202ENST00000344391 CFDP1Q9UEE9 299 aaPredicted RBP24.73■■□□□ 1.55
CEACAM1-202ENST00000344391 PREX2Q70Z35 1606 aa24.72■■□□□ 1.55
CEACAM1-202ENST00000344391 MAPKBP1O60336 1514 aa24.72■■□□□ 1.55
CEACAM1-202ENST00000344391 CDC42BPBQ9Y5S2 1711 aa24.72■■□□□ 1.55
CEACAM1-202ENST00000344391 MYO5CQ9NQX4 1742 aa24.71■■□□□ 1.55
CEACAM1-202ENST00000344391 ABCA9Q8IUA7 1624 aa24.68■■□□□ 1.54
CEACAM1-202ENST00000344391 ITGAEP38570 1179 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms