RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 NUP160Q12769 1436 aa21.98■■□□□ 1.11
MS4A4A-202ENST00000343968 KIAA0586Q9BVV6 1533 aa21.96■■□□□ 1.11
MS4A4A-202ENST00000343968 CEP170Q5SW79 1584 aa21.94■■□□□ 1.1
MS4A4A-202ENST00000343968 IQGAP2Q13576 1575 aa21.93■■□□□ 1.1
MS4A4A-202ENST00000343968 ARHGAP35Q9NRY4 1499 aa21.92■■□□□ 1.1
MS4A4A-202ENST00000343968 CHD1O14646 1710 aa21.92■■□□□ 1.1
MS4A4A-202ENST00000343968 EFCAB5A4FU69 1503 aa21.92■■□□□ 1.1
MS4A4A-202ENST00000343968 FBLN2P98095 1184 aa21.89■■□□□ 1.1
MS4A4A-202ENST00000343968 UGGT2Q9NYU1 1516 aa21.87■■□□□ 1.09
MS4A4A-202ENST00000343968 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
MS4A4A-202ENST00000343968 SAMD9Q5K651 1589 aa21.87■■□□□ 1.09
MS4A4A-202ENST00000343968 VPS8Q8N3P4 1428 aa21.84■■□□□ 1.09
MS4A4A-202ENST00000343968 RANGAP1P46060 587 aaPredicted RBP21.82■■□□□ 1.08
MS4A4A-202ENST00000343968 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
MS4A4A-202ENST00000343968 DISP1Q96F81 1524 aa21.74■■□□□ 1.07
MS4A4A-202ENST00000343968 JPH4Q96JJ6 628 aa21.73■■□□□ 1.07
MS4A4A-202ENST00000343968 KIAA0556O60303 1618 aa21.72■■□□□ 1.07
MS4A4A-202ENST00000343968 SHROOM2Q13796 1616 aa21.72■■□□□ 1.07
MS4A4A-202ENST00000343968 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
MS4A4A-202ENST00000343968 FMN1Q68DA7 1419 aa21.69■■□□□ 1.06
MS4A4A-202ENST00000343968 CARMIL2Q6F5E8 1435 aa21.66■■□□□ 1.06
MS4A4A-202ENST00000343968 P3H3Q8IVL6 736 aa21.66■■□□□ 1.06
MS4A4A-202ENST00000343968 CASKIN1Q8WXD9 1431 aa21.62■■□□□ 1.05
MS4A4A-202ENST00000343968 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
MS4A4A-202ENST00000343968 FYCO1Q9BQS8 1478 aa21.6■■□□□ 1.05
MS4A4A-202ENST00000343968 OSCARQ8IYS5 282 aa21.6■■□□□ 1.05
MS4A4A-202ENST00000343968 PCF11O94913 1555 aaKnown RBP21.59■■□□□ 1.05
MS4A4A-202ENST00000343968 MAP3K1Q13233 1512 aa21.59■■□□□ 1.05
MS4A4A-202ENST00000343968 APLP2Q06481 763 aa21.51■■□□□ 1.03
MS4A4A-202ENST00000343968 HECW1Q76N89 1606 aa21.49■■□□□ 1.03
MS4A4A-202ENST00000343968 TIAM1Q13009 1591 aa21.49■■□□□ 1.03
MS4A4A-202ENST00000343968 ERCC6L2Q5T890 1561 aa21.48■■□□□ 1.03
MS4A4A-202ENST00000343968 CFAP43Q8NDM7 1665 aa21.47■■□□□ 1.03
MS4A4A-202ENST00000343968 RAPGEF6Q8TEU7 1601 aa21.47■■□□□ 1.03
MS4A4A-202ENST00000343968 PTPRGP23470 1445 aa21.45■■□□□ 1.02
MS4A4A-202ENST00000343968 ABCA8O94911 1581 aa21.45■■□□□ 1.02
MS4A4A-202ENST00000343968 CCDC18Q5T9S5 1454 aa21.44■■□□□ 1.02
MS4A4A-202ENST00000343968 LRRIQ1Q96JM4 1722 aa21.44■■□□□ 1.02
MS4A4A-202ENST00000343968 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
MS4A4A-202ENST00000343968 NUP153P49790 1475 aaKnown RBP21.4■■□□□ 1.02
MS4A4A-202ENST00000343968 EPRSP07814 1512 aaKnown RBP21.4■■□□□ 1.02
MS4A4A-202ENST00000343968 LRRC9Q6ZRR7 1453 aa21.38■■□□□ 1.01
MS4A4A-202ENST00000343968 KANK4Q5T7N3 995 aaPredicted RBP21.37■■□□□ 1.01
MS4A4A-202ENST00000343968 ATP1B4Q9UN42 357 aaPredicted RBP21.37■■□□□ 1.01
MS4A4A-202ENST00000343968 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
MS4A4A-202ENST00000343968 UACAQ9BZF9 1416 aa21.36■■□□□ 1.01
MS4A4A-202ENST00000343968 UHRF1BP1LA0JNW5 1464 aa21.33■■□□□ 1.01
MS4A4A-202ENST00000343968 TTBK1Q5TCY1 1321 aaPredicted RBP21.32■■□□□ 1
MS4A4A-202ENST00000343968 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
MS4A4A-202ENST00000343968 ABCC2Q92887 1545 aa21.31■■□□□ 1
MS4A4A-202ENST00000343968 CDK13Q14004 1512 aaKnown RBP21.3■■□□□ 1
MS4A4A-202ENST00000343968 EHBP1L1Q8N3D4 1523 aa21.29■■□□□ 1
MS4A4A-202ENST00000343968 ATP10BO94823 1461 aa21.27■■□□□ 1
MS4A4A-202ENST00000343968 MAGI3Q5TCQ9 1506 aa21.26■□□□□ 0.99
MS4A4A-202ENST00000343968 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
MS4A4A-202ENST00000343968 MTUS2Q5JR59 1369 aa21.25■□□□□ 0.99
MS4A4A-202ENST00000343968 CDK11AQ9UQ88 783 aaPredicted RBP21.23■□□□□ 0.99
MS4A4A-202ENST00000343968 KDM5BQ9UGL1 1544 aa21.21■□□□□ 0.99
MS4A4A-202ENST00000343968 SUPT6HQ7KZ85 1726 aaKnown RBP21.2■□□□□ 0.98
MS4A4A-202ENST00000343968 TROQ12816 1431 aaPredicted RBP21.19■□□□□ 0.98
MS4A4A-202ENST00000343968 ADCY10Q96PN6 1610 aa21.18■□□□□ 0.98
MS4A4A-202ENST00000343968 RRBP1Q9P2E9 1410 aaKnown RBP21.16■□□□□ 0.98
MS4A4A-202ENST00000343968 RIMBP3CA6NJZ7 1639 aa21.16■□□□□ 0.98
MS4A4A-202ENST00000343968 RIMBP3BA6NNM3 1639 aa21.16■□□□□ 0.98
MS4A4A-202ENST00000343968 RIMBP3Q9UFD9 1639 aa21.16■□□□□ 0.98
MS4A4A-202ENST00000343968 NCOA2Q15596 1464 aa21.15■□□□□ 0.98
MS4A4A-202ENST00000343968 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
MS4A4A-202ENST00000343968 PHLDB1Q86UU1 1377 aa21.15■□□□□ 0.98
MS4A4A-202ENST00000343968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.14■□□□□ 0.97
MS4A4A-202ENST00000343968 HNRNPUL2Q1KMD3 747 aaKnown RBP21.14■□□□□ 0.97
MS4A4A-202ENST00000343968 ZCCHC11Q5TAX3 1644 aaKnown RBP21.14■□□□□ 0.97
MS4A4A-202ENST00000343968 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
MS4A4A-202ENST00000343968 PLEKHD1A6NEE1 506 aa21.12■□□□□ 0.97
MS4A4A-202ENST00000343968 MYOM3Q5VTT5 1437 aa21.07■□□□□ 0.96
MS4A4A-202ENST00000343968 CCNB3Q8WWL7 1395 aa21.06■□□□□ 0.96
MS4A4A-202ENST00000343968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.06■□□□□ 0.96
MS4A4A-202ENST00000343968 KIF14Q15058 1648 aa21.05■□□□□ 0.96
MS4A4A-202ENST00000343968 FGD6Q6ZV73 1430 aa21.04■□□□□ 0.96
MS4A4A-202ENST00000343968 ABCC10Q5T3U5 1492 aa21.04■□□□□ 0.96
MS4A4A-202ENST00000343968 MIA2Q96PC5 1412 aa21.02■□□□□ 0.96
MS4A4A-202ENST00000343968 WDR7Q9Y4E6 1490 aa20.98■□□□□ 0.95
MS4A4A-202ENST00000343968 TCOF1Q13428 1488 aaKnown RBP20.98■□□□□ 0.95
MS4A4A-202ENST00000343968 ITSN2Q9NZM3 1697 aa20.97■□□□□ 0.95
MS4A4A-202ENST00000343968 NPM1P06748 294 aaKnown RBP eCLIP20.97■□□□□ 0.95
MS4A4A-202ENST00000343968 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
MS4A4A-202ENST00000343968 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
MS4A4A-202ENST00000343968 PTPN23Q9H3S7 1636 aa20.95■□□□□ 0.94
MS4A4A-202ENST00000343968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.94■□□□□ 0.94
MS4A4A-202ENST00000343968 ASXL2Q76L83 1435 aa20.94■□□□□ 0.94
MS4A4A-202ENST00000343968 HRCP23327 699 aa20.93■□□□□ 0.94
MS4A4A-202ENST00000343968 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
MS4A4A-202ENST00000343968 MAPKBP1O60336 1514 aa20.92■□□□□ 0.94
MS4A4A-202ENST00000343968 TTC37Q6PGP7 1564 aa20.9■□□□□ 0.94
MS4A4A-202ENST00000343968 PREX2Q70Z35 1606 aa20.89■□□□□ 0.93
MS4A4A-202ENST00000343968 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
MS4A4A-202ENST00000343968 FAM50AQ14320 339 aaKnown RBP20.86■□□□□ 0.93
MS4A4A-202ENST00000343968 ARAP3Q8WWN8 1544 aa20.86■□□□□ 0.93
MS4A4A-202ENST00000343968 CFDP1Q9UEE9 299 aaPredicted RBP20.86■□□□□ 0.93
MS4A4A-202ENST00000343968 MYO5CQ9NQX4 1742 aa20.86■□□□□ 0.93
MS4A4A-202ENST00000343968 CDC42BPBQ9Y5S2 1711 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms