RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 FAM9AQ8IZU1 332 aaPredicted RBP12.72□□□□□ -0.37
CFAP54-201ENST00000342887 GRIN2BQ13224 1484 aa12.71□□□□□ -0.37
CFAP54-201ENST00000342887 GCC2Q8IWJ2 1684 aa12.71□□□□□ -0.37
CFAP54-201ENST00000342887 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
CFAP54-201ENST00000342887 NESP48681 1621 aa12.7□□□□□ -0.38
CFAP54-201ENST00000342887 CASKIN1Q8WXD9 1431 aa12.67□□□□□ -0.38
CFAP54-201ENST00000342887 CLSPNQ9HAW4 1339 aa12.66□□□□□ -0.38
CFAP54-201ENST00000342887 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
CFAP54-201ENST00000342887 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
CFAP54-201ENST00000342887 UGGT2Q9NYU1 1516 aa12.64□□□□□ -0.39
CFAP54-201ENST00000342887 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
CFAP54-201ENST00000342887 TCOF1Q13428 1488 aaKnown RBP12.62□□□□□ -0.39
CFAP54-201ENST00000342887 MAGI3Q5TCQ9 1506 aa12.62□□□□□ -0.39
CFAP54-201ENST00000342887 DHX57Q6P158 1386 aaKnown RBP12.61□□□□□ -0.39
CFAP54-201ENST00000342887 CARMIL1Q5VZK9 1371 aa12.6□□□□□ -0.39
CFAP54-201ENST00000342887 CROCC2H7BZ55 1655 aa12.59□□□□□ -0.39
CFAP54-201ENST00000342887 HECW1Q76N89 1606 aa12.58□□□□□ -0.4
CFAP54-201ENST00000342887 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
CFAP54-201ENST00000342887 SUPT6HQ7KZ85 1726 aaKnown RBP12.57□□□□□ -0.4
CFAP54-201ENST00000342887 FHAD1B1AJZ9 1412 aa12.56□□□□□ -0.4
CFAP54-201ENST00000342887 EHBP1L1Q8N3D4 1523 aa12.55□□□□□ -0.4
CFAP54-201ENST00000342887 EIF4G3O43432 1585 aaKnown RBP12.54□□□□□ -0.4
CFAP54-201ENST00000342887 IQGAP2Q13576 1575 aa12.53□□□□□ -0.4
CFAP54-201ENST00000342887 DENND4BO75064 1496 aaPredicted RBP12.53□□□□□ -0.4
CFAP54-201ENST00000342887 KIAA0556O60303 1618 aa12.53□□□□□ -0.4
CFAP54-201ENST00000342887 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
CFAP54-201ENST00000342887 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
CFAP54-201ENST00000342887 AKNAQ7Z591 1439 aa12.52□□□□□ -0.4
CFAP54-201ENST00000342887 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
CFAP54-201ENST00000342887 KANK4Q5T7N3 995 aaPredicted RBP12.5□□□□□ -0.41
CFAP54-201ENST00000342887 PDS5BQ9NTI5 1447 aa12.5□□□□□ -0.41
CFAP54-201ENST00000342887 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
CFAP54-201ENST00000342887 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
CFAP54-201ENST00000342887 DISP1Q96F81 1524 aa12.48□□□□□ -0.41
CFAP54-201ENST00000342887 SHROOM2Q13796 1616 aa12.47□□□□□ -0.41
CFAP54-201ENST00000342887 ADGBQ8N7X0 1667 aa12.46□□□□□ -0.41
CFAP54-201ENST00000342887 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.41
CFAP54-201ENST00000342887 DNMT1P26358 1616 aaKnown RBP12.45□□□□□ -0.42
CFAP54-201ENST00000342887 CEP170Q5SW79 1584 aa12.45□□□□□ -0.42
CFAP54-201ENST00000342887 IFT140Q96RY7 1462 aa12.45□□□□□ -0.42
CFAP54-201ENST00000342887 FMN1Q68DA7 1419 aa12.44□□□□□ -0.42
CFAP54-201ENST00000342887 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
CFAP54-201ENST00000342887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
CFAP54-201ENST00000342887 UBTFP17480 764 aaKnown RBP12.41□□□□□ -0.42
CFAP54-201ENST00000342887 RAPGEF6Q8TEU7 1601 aa12.41□□□□□ -0.42
CFAP54-201ENST00000342887 PTPRKQ15262 1439 aa12.41□□□□□ -0.42
CFAP54-201ENST00000342887 KDM6BO15054 1643 aa12.41□□□□□ -0.42
CFAP54-201ENST00000342887 HFM1A2PYH4 1435 aa12.41□□□□□ -0.42
CFAP54-201ENST00000342887 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.42
CFAP54-201ENST00000342887 FGD6Q6ZV73 1430 aa12.39□□□□□ -0.43
CFAP54-201ENST00000342887 FHOD3Q2V2M9 1422 aa12.38□□□□□ -0.43
CFAP54-201ENST00000342887 ITSN2Q9NZM3 1697 aa12.38□□□□□ -0.43
CFAP54-201ENST00000342887 ABCA8O94911 1581 aa12.38□□□□□ -0.43
CFAP54-201ENST00000342887 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
CFAP54-201ENST00000342887 NUP160Q12769 1436 aa12.36□□□□□ -0.43
CFAP54-201ENST00000342887 EPRSP07814 1512 aaKnown RBP12.36□□□□□ -0.43
CFAP54-201ENST00000342887 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
CFAP54-201ENST00000342887 KIAA0586Q9BVV6 1533 aa12.35□□□□□ -0.43
CFAP54-201ENST00000342887 MYOM3Q5VTT5 1437 aa12.34□□□□□ -0.43
CFAP54-201ENST00000342887 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
CFAP54-201ENST00000342887 GRIN2AQ12879 1464 aa12.33□□□□□ -0.44
CFAP54-201ENST00000342887 KDM5DQ9BY66 1539 aa12.33□□□□□ -0.44
CFAP54-201ENST00000342887 MIA2Q96PC5 1412 aa12.33□□□□□ -0.44
CFAP54-201ENST00000342887 RAB3GAP2Q9H2M9 1393 aa12.32□□□□□ -0.44
CFAP54-201ENST00000342887 NUP153P49790 1475 aaKnown RBP12.32□□□□□ -0.44
CFAP54-201ENST00000342887 NAIPQ13075 1403 aa12.31□□□□□ -0.44
CFAP54-201ENST00000342887 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
CFAP54-201ENST00000342887 ADGRL2O95490 1459 aa12.31□□□□□ -0.44
CFAP54-201ENST00000342887 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
CFAP54-201ENST00000342887 MBD5Q9P267 1494 aa12.28□□□□□ -0.44
CFAP54-201ENST00000342887 UACAQ9BZF9 1416 aa12.27□□□□□ -0.45
CFAP54-201ENST00000342887 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
CFAP54-201ENST00000342887 MYT1Q01538 1121 aa12.27□□□□□ -0.45
CFAP54-201ENST00000342887 MAST1Q9Y2H9 1570 aa12.26□□□□□ -0.45
CFAP54-201ENST00000342887 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
CFAP54-201ENST00000342887 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
CFAP54-201ENST00000342887 ARHGEF5Q12774 1597 aa12.25□□□□□ -0.45
CFAP54-201ENST00000342887 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
CFAP54-201ENST00000342887 KIF14Q15058 1648 aa12.24□□□□□ -0.45
CFAP54-201ENST00000342887 CCER1Q8TC90 406 aaPredicted RBP12.24□□□□□ -0.45
CFAP54-201ENST00000342887 E9PCH4 1651 aa12.24□□□□□ -0.45
CFAP54-201ENST00000342887 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
CFAP54-201ENST00000342887 PREX2Q70Z35 1606 aa12.23□□□□□ -0.45
CFAP54-201ENST00000342887 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
CFAP54-201ENST00000342887 CHD1O14646 1710 aa12.22□□□□□ -0.45
CFAP54-201ENST00000342887 SHANK2Q9UPX8 1470 aa12.22□□□□□ -0.45
CFAP54-201ENST00000342887 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
CFAP54-201ENST00000342887 TIMELESSQ9UNS1 1208 aa12.22□□□□□ -0.45
CFAP54-201ENST00000342887 TDRD9Q8NDG6 1382 aaKnown RBP12.21□□□□□ -0.46
CFAP54-201ENST00000342887 TEX14Q8IWB6 1497 aa12.2□□□□□ -0.46
CFAP54-201ENST00000342887 UNC13BO14795 1591 aa12.19□□□□□ -0.46
CFAP54-201ENST00000342887 CLASP1Q7Z460 1538 aa12.18□□□□□ -0.46
CFAP54-201ENST00000342887 LAMC1P11047 1609 aa12.18□□□□□ -0.46
CFAP54-201ENST00000342887 ACIN1Q9UKV3 1341 aaKnown RBP12.17□□□□□ -0.46
CFAP54-201ENST00000342887 DIEXFQ68CQ4 756 aaKnown RBP12.16□□□□□ -0.46
CFAP54-201ENST00000342887 PLXNC1O60486 1568 aa12.16□□□□□ -0.46
CFAP54-201ENST00000342887 MAGI2Q86UL8 1455 aa12.15□□□□□ -0.46
CFAP54-201ENST00000342887 PTPRGP23470 1445 aa12.15□□□□□ -0.46
CFAP54-201ENST00000342887 PZPP20742 1482 aa12.13□□□□□ -0.47
CFAP54-201ENST00000342887 DAPK1P53355 1430 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms