RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 CEP170Q5SW79 1584 aa33.5■■■□□ 2.95
SNX21-201ENST00000342644 CTTNBP2Q8WZ74 1663 aa33.48■■■□□ 2.95
SNX21-201ENST00000342644 KIAA0586Q9BVV6 1533 aa33.44■■■□□ 2.94
SNX21-201ENST00000342644 IQGAP2Q13576 1575 aa33.36■■■□□ 2.93
SNX21-201ENST00000342644 OSCARQ8IYS5 282 aa33.34■■■□□ 2.93
SNX21-201ENST00000342644 CLASP1Q7Z460 1538 aa33.32■■■□□ 2.92
SNX21-201ENST00000342644 UGGT2Q9NYU1 1516 aa33.23■■■□□ 2.91
SNX21-201ENST00000342644 CEP162Q5TB80 1403 aa33.21■■■□□ 2.91
SNX21-201ENST00000342644 JPH4Q96JJ6 628 aa33.2■■■□□ 2.91
SNX21-201ENST00000342644 SHROOM2Q13796 1616 aa33.19■■■□□ 2.9
SNX21-201ENST00000342644 CLIP1P30622 1438 aa33.15■■■□□ 2.9
SNX21-201ENST00000342644 EFCAB5A4FU69 1503 aa33.14■■■□□ 2.9
SNX21-201ENST00000342644 SAMD9Q5K651 1589 aa33.12■■■□□ 2.89
SNX21-201ENST00000342644 ARHGAP35Q9NRY4 1499 aa33.09■■■□□ 2.89
SNX21-201ENST00000342644 RANGAP1P46060 587 aaPredicted RBP33.07■■■□□ 2.89
SNX21-201ENST00000342644 DISP1Q96F81 1524 aa33.07■■■□□ 2.88
SNX21-201ENST00000342644 CARMIL2Q6F5E8 1435 aa33.04■■■□□ 2.88
SNX21-201ENST00000342644 PRG4Q92954 1404 aaPredicted RBP33.04■■■□□ 2.88
SNX21-201ENST00000342644 KIAA0556O60303 1618 aa33.03■■■□□ 2.88
SNX21-201ENST00000342644 ARAP1Q96P48 1450 aa32.94■■■□□ 2.86
SNX21-201ENST00000342644 P3H3Q8IVL6 736 aa32.91■■■□□ 2.86
SNX21-201ENST00000342644 FHOD3Q2V2M9 1422 aa32.91■■■□□ 2.86
SNX21-201ENST00000342644 ERCC6L2Q5T890 1561 aa32.9■■■□□ 2.86
SNX21-201ENST00000342644 FMN1Q68DA7 1419 aa32.82■■■□□ 2.84
SNX21-201ENST00000342644 ARHGEF11O15085 1522 aa32.79■■■□□ 2.84
SNX21-201ENST00000342644 VPS8Q8N3P4 1428 aa32.78■■■□□ 2.84
SNX21-201ENST00000342644 PTPRGP23470 1445 aa32.77■■■□□ 2.84
SNX21-201ENST00000342644 RIMBP3CA6NJZ7 1639 aa32.69■■■□□ 2.82
SNX21-201ENST00000342644 RIMBP3BA6NNM3 1639 aa32.69■■■□□ 2.82
SNX21-201ENST00000342644 RIMBP3Q9UFD9 1639 aa32.69■■■□□ 2.82
SNX21-201ENST00000342644 CASKIN1Q8WXD9 1431 aa32.65■■■□□ 2.82
SNX21-201ENST00000342644 ABCA8O94911 1581 aa32.63■■■□□ 2.81
SNX21-201ENST00000342644 TTBK1Q5TCY1 1321 aaPredicted RBP32.62■■■□□ 2.81
SNX21-201ENST00000342644 FYCO1Q9BQS8 1478 aa32.62■■■□□ 2.81
SNX21-201ENST00000342644 PCF11O94913 1555 aaKnown RBP32.61■■■□□ 2.81
SNX21-201ENST00000342644 RAPGEF6Q8TEU7 1601 aa32.6■■■□□ 2.81
SNX21-201ENST00000342644 PLB1Q6P1J6 1458 aa32.6■■■□□ 2.81
SNX21-201ENST00000342644 UACAQ9BZF9 1416 aa32.59■■■□□ 2.81
SNX21-201ENST00000342644 HECW1Q76N89 1606 aa32.54■■■□□ 2.8
SNX21-201ENST00000342644 UHRF1BP1LA0JNW5 1464 aa32.54■■■□□ 2.8
SNX21-201ENST00000342644 DNAJC5Q9H3Z4 198 aa32.53■■■□□ 2.8
SNX21-201ENST00000342644 ABCC2Q92887 1545 aa32.52■■■□□ 2.8
SNX21-201ENST00000342644 NUP153P49790 1475 aaKnown RBP32.5■■■□□ 2.79
SNX21-201ENST00000342644 MAP3K1Q13233 1512 aa32.44■■■□□ 2.78
SNX21-201ENST00000342644 CCDC18Q5T9S5 1454 aa32.43■■■□□ 2.78
SNX21-201ENST00000342644 EPRSP07814 1512 aaKnown RBP32.43■■■□□ 2.78
SNX21-201ENST00000342644 ATP1B4Q9UN42 357 aaPredicted RBP32.43■■■□□ 2.78
SNX21-201ENST00000342644 LRRIQ1Q96JM4 1722 aa32.42■■■□□ 2.78
SNX21-201ENST00000342644 ADCY10Q96PN6 1610 aa32.42■■■□□ 2.78
SNX21-201ENST00000342644 CYB5RLQ6IPT4 315 aa32.41■■■□□ 2.78
SNX21-201ENST00000342644 KDM5BQ9UGL1 1544 aa32.38■■■□□ 2.77
SNX21-201ENST00000342644 APLP2Q06481 763 aa32.37■■■□□ 2.77
SNX21-201ENST00000342644 ATP10BO94823 1461 aa32.36■■■□□ 2.77
SNX21-201ENST00000342644 TIAM1Q13009 1591 aa32.35■■■□□ 2.77
SNX21-201ENST00000342644 CFAP43Q8NDM7 1665 aa32.35■■■□□ 2.77
SNX21-201ENST00000342644 CDK13Q14004 1512 aaKnown RBP32.32■■■□□ 2.76
SNX21-201ENST00000342644 ZCCHC11Q5TAX3 1644 aaKnown RBP32.27■■■□□ 2.76
SNX21-201ENST00000342644 ARID3CA6NKF2 412 aa32.26■■■□□ 2.75
SNX21-201ENST00000342644 CDK11AQ9UQ88 783 aaPredicted RBP32.24■■■□□ 2.75
SNX21-201ENST00000342644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.21■■■□□ 2.75
SNX21-201ENST00000342644 NPM1P06748 294 aaKnown RBP eCLIP32.21■■■□□ 2.75
SNX21-201ENST00000342644 HNRNPUL2Q1KMD3 747 aaKnown RBP32.21■■■□□ 2.75
SNX21-201ENST00000342644 LRRC9Q6ZRR7 1453 aa32.21■■■□□ 2.75
SNX21-201ENST00000342644 KANK4Q5T7N3 995 aaPredicted RBP32.17■■■□□ 2.74
SNX21-201ENST00000342644 PLEKHD1A6NEE1 506 aa32.16■■■□□ 2.74
SNX21-201ENST00000342644 MAGI3Q5TCQ9 1506 aa32.15■■■□□ 2.74
SNX21-201ENST00000342644 MTUS2Q5JR59 1369 aa32.14■■■□□ 2.74
SNX21-201ENST00000342644 EHBP1L1Q8N3D4 1523 aa32.14■■■□□ 2.74
SNX21-201ENST00000342644 TROQ12816 1431 aaPredicted RBP32.13■■■□□ 2.73
SNX21-201ENST00000342644 MAPKBP1O60336 1514 aa32.09■■■□□ 2.73
SNX21-201ENST00000342644 ASXL2Q76L83 1435 aa32.06■■■□□ 2.72
SNX21-201ENST00000342644 WDR7Q9Y4E6 1490 aa32.05■■■□□ 2.72
SNX21-201ENST00000342644 SUPT6HQ7KZ85 1726 aaKnown RBP32.01■■■□□ 2.71
SNX21-201ENST00000342644 PPARGC1BQ86YN6 1023 aaKnown RBP32■■■□□ 2.71
SNX21-201ENST00000342644 KIF14Q15058 1648 aa31.97■■■□□ 2.71
SNX21-201ENST00000342644 NCOA2Q15596 1464 aa31.94■■■□□ 2.7
SNX21-201ENST00000342644 ABCC10Q5T3U5 1492 aa31.9■■■□□ 2.7
SNX21-201ENST00000342644 KCNH8Q96L42 1107 aa31.88■■■□□ 2.69
SNX21-201ENST00000342644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.87■■■□□ 2.69
SNX21-201ENST00000342644 PHLDB1Q86UU1 1377 aa31.83■■■□□ 2.69
SNX21-201ENST00000342644 ABCA9Q8IUA7 1624 aa31.83■■■□□ 2.69
SNX21-201ENST00000342644 GLI2P10070 1586 aa31.81■■■□□ 2.68
SNX21-201ENST00000342644 TTC37Q6PGP7 1564 aa31.8■■■□□ 2.68
SNX21-201ENST00000342644 CCNB3Q8WWL7 1395 aa31.8■■■□□ 2.68
SNX21-201ENST00000342644 MYOM3Q5VTT5 1437 aa31.79■■■□□ 2.68
SNX21-201ENST00000342644 GPATCH8Q9UKJ3 1502 aaKnown RBP31.78■■■□□ 2.68
SNX21-201ENST00000342644 DIP2BQ9P265 1576 aa31.78■■■□□ 2.68
SNX21-201ENST00000342644 ITSN2Q9NZM3 1697 aa31.76■■■□□ 2.67
SNX21-201ENST00000342644 CDC42BPAQ5VT25 1732 aa31.75■■■□□ 2.67
SNX21-201ENST00000342644 MYO5CQ9NQX4 1742 aa31.73■■■□□ 2.67
SNX21-201ENST00000342644 MIA2Q96PC5 1412 aa31.73■■■□□ 2.67
SNX21-201ENST00000342644 ARAP3Q8WWN8 1544 aa31.71■■■□□ 2.67
SNX21-201ENST00000342644 PREX2Q70Z35 1606 aa31.71■■■□□ 2.67
SNX21-201ENST00000342644 PLCH2O75038 1416 aa31.71■■■□□ 2.67
SNX21-201ENST00000342644 FGD6Q6ZV73 1430 aa31.7■■■□□ 2.66
SNX21-201ENST00000342644 RRBP1Q9P2E9 1410 aaKnown RBP31.7■■■□□ 2.66
SNX21-201ENST00000342644 MAP3K4Q9Y6R4 1608 aa31.68■■■□□ 2.66
SNX21-201ENST00000342644 CDC42BPBQ9Y5S2 1711 aa31.67■■■□□ 2.66
SNX21-201ENST00000342644 FAM69CQ0P6D2 419 aa31.67■■■□□ 2.66
SNX21-201ENST00000342644 CD109Q6YHK3 1445 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms