RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 NUP160Q12769 1436 aa26.38■■□□□ 1.81
SNED1-202ENST00000342631 CEP170Q5SW79 1584 aa26.33■■□□□ 1.81
SNED1-202ENST00000342631 KIAA0586Q9BVV6 1533 aa26.33■■□□□ 1.81
SNED1-202ENST00000342631 IQGAP2Q13576 1575 aa26.28■■□□□ 1.8
SNED1-202ENST00000342631 CEP162Q5TB80 1403 aa26.24■■□□□ 1.79
SNED1-202ENST00000342631 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
SNED1-202ENST00000342631 CLIP1P30622 1438 aa26.18■■□□□ 1.78
SNED1-202ENST00000342631 CLASP1Q7Z460 1538 aa26.17■■□□□ 1.78
SNED1-202ENST00000342631 UGGT2Q9NYU1 1516 aa26.17■■□□□ 1.78
SNED1-202ENST00000342631 EFCAB5A4FU69 1503 aa26.15■■□□□ 1.78
SNED1-202ENST00000342631 JPH4Q96JJ6 628 aa26.11■■□□□ 1.77
SNED1-202ENST00000342631 SAMD9Q5K651 1589 aa26.1■■□□□ 1.77
SNED1-202ENST00000342631 SHROOM2Q13796 1616 aa26.09■■□□□ 1.77
SNED1-202ENST00000342631 ARHGAP35Q9NRY4 1499 aa26.08■■□□□ 1.77
SNED1-202ENST00000342631 RANGAP1P46060 587 aaPredicted RBP26.08■■□□□ 1.77
SNED1-202ENST00000342631 CARMIL2Q6F5E8 1435 aa26.03■■□□□ 1.76
SNED1-202ENST00000342631 DISP1Q96F81 1524 aa26.02■■□□□ 1.76
SNED1-202ENST00000342631 KIAA0556O60303 1618 aa26■■□□□ 1.75
SNED1-202ENST00000342631 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
SNED1-202ENST00000342631 ARAP1Q96P48 1450 aa25.97■■□□□ 1.75
SNED1-202ENST00000342631 FHOD3Q2V2M9 1422 aa25.93■■□□□ 1.74
SNED1-202ENST00000342631 P3H3Q8IVL6 736 aa25.91■■□□□ 1.74
SNED1-202ENST00000342631 FMN1Q68DA7 1419 aa25.9■■□□□ 1.74
SNED1-202ENST00000342631 VPS8Q8N3P4 1428 aa25.9■■□□□ 1.74
SNED1-202ENST00000342631 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
SNED1-202ENST00000342631 PTPRGP23470 1445 aa25.78■■□□□ 1.72
SNED1-202ENST00000342631 CASKIN1Q8WXD9 1431 aa25.76■■□□□ 1.71
SNED1-202ENST00000342631 FYCO1Q9BQS8 1478 aa25.75■■□□□ 1.71
SNED1-202ENST00000342631 ARHGEF11O15085 1522 aa25.72■■□□□ 1.71
SNED1-202ENST00000342631 PCF11O94913 1555 aaKnown RBP25.72■■□□□ 1.71
SNED1-202ENST00000342631 RAPGEF6Q8TEU7 1601 aa25.69■■□□□ 1.7
SNED1-202ENST00000342631 ABCA8O94911 1581 aa25.68■■□□□ 1.7
SNED1-202ENST00000342631 HECW1Q76N89 1606 aa25.67■■□□□ 1.7
SNED1-202ENST00000342631 TTBK1Q5TCY1 1321 aaPredicted RBP25.67■■□□□ 1.7
SNED1-202ENST00000342631 PLB1Q6P1J6 1458 aa25.65■■□□□ 1.7
SNED1-202ENST00000342631 UACAQ9BZF9 1416 aa25.64■■□□□ 1.7
SNED1-202ENST00000342631 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.69
SNED1-202ENST00000342631 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.69
SNED1-202ENST00000342631 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.69
SNED1-202ENST00000342631 MAP3K1Q13233 1512 aa25.63■■□□□ 1.69
SNED1-202ENST00000342631 APLP2Q06481 763 aa25.63■■□□□ 1.69
SNED1-202ENST00000342631 UHRF1BP1LA0JNW5 1464 aa25.6■■□□□ 1.69
SNED1-202ENST00000342631 CCDC18Q5T9S5 1454 aa25.6■■□□□ 1.69
SNED1-202ENST00000342631 ABCC2Q92887 1545 aa25.59■■□□□ 1.69
SNED1-202ENST00000342631 NUP153P49790 1475 aaKnown RBP25.59■■□□□ 1.69
SNED1-202ENST00000342631 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
SNED1-202ENST00000342631 EPRSP07814 1512 aaKnown RBP25.56■■□□□ 1.68
SNED1-202ENST00000342631 TIAM1Q13009 1591 aa25.54■■□□□ 1.68
SNED1-202ENST00000342631 CFAP43Q8NDM7 1665 aa25.54■■□□□ 1.68
SNED1-202ENST00000342631 LRRIQ1Q96JM4 1722 aa25.54■■□□□ 1.68
SNED1-202ENST00000342631 ADCY10Q96PN6 1610 aa25.48■■□□□ 1.67
SNED1-202ENST00000342631 KDM5BQ9UGL1 1544 aa25.46■■□□□ 1.67
SNED1-202ENST00000342631 ATP10BO94823 1461 aa25.46■■□□□ 1.67
SNED1-202ENST00000342631 CDK13Q14004 1512 aaKnown RBP25.45■■□□□ 1.66
SNED1-202ENST00000342631 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.66
SNED1-202ENST00000342631 CYB5RLQ6IPT4 315 aa25.42■■□□□ 1.66
SNED1-202ENST00000342631 LRRC9Q6ZRR7 1453 aa25.42■■□□□ 1.66
SNED1-202ENST00000342631 DNAJC5Q9H3Z4 198 aa25.41■■□□□ 1.66
SNED1-202ENST00000342631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.4■■□□□ 1.66
SNED1-202ENST00000342631 HNRNPUL2Q1KMD3 747 aaKnown RBP25.4■■□□□ 1.66
SNED1-202ENST00000342631 ZCCHC11Q5TAX3 1644 aaKnown RBP25.39■■□□□ 1.65
SNED1-202ENST00000342631 ARID3CA6NKF2 412 aa25.38■■□□□ 1.65
SNED1-202ENST00000342631 MTUS2Q5JR59 1369 aa25.37■■□□□ 1.65
SNED1-202ENST00000342631 EHBP1L1Q8N3D4 1523 aa25.37■■□□□ 1.65
SNED1-202ENST00000342631 KANK4Q5T7N3 995 aaPredicted RBP25.37■■□□□ 1.65
SNED1-202ENST00000342631 NPM1P06748 294 aaKnown RBP eCLIP25.36■■□□□ 1.65
SNED1-202ENST00000342631 PLEKHD1A6NEE1 506 aa25.34■■□□□ 1.65
SNED1-202ENST00000342631 TROQ12816 1431 aaPredicted RBP25.32■■□□□ 1.64
SNED1-202ENST00000342631 MAGI3Q5TCQ9 1506 aa25.32■■□□□ 1.64
SNED1-202ENST00000342631 SUPT6HQ7KZ85 1726 aaKnown RBP25.28■■□□□ 1.64
SNED1-202ENST00000342631 PPARGC1BQ86YN6 1023 aaKnown RBP25.27■■□□□ 1.64
SNED1-202ENST00000342631 WDR7Q9Y4E6 1490 aa25.22■■□□□ 1.63
SNED1-202ENST00000342631 MAPKBP1O60336 1514 aa25.22■■□□□ 1.63
SNED1-202ENST00000342631 KIF14Q15058 1648 aa25.21■■□□□ 1.63
SNED1-202ENST00000342631 ASXL2Q76L83 1435 aa25.21■■□□□ 1.63
SNED1-202ENST00000342631 NCOA2Q15596 1464 aa25.2■■□□□ 1.62
SNED1-202ENST00000342631 ABCC10Q5T3U5 1492 aa25.11■■□□□ 1.61
SNED1-202ENST00000342631 PHLDB1Q86UU1 1377 aa25.1■■□□□ 1.61
SNED1-202ENST00000342631 CCNB3Q8WWL7 1395 aa25.09■■□□□ 1.61
SNED1-202ENST00000342631 MYOM3Q5VTT5 1437 aa25.09■■□□□ 1.61
SNED1-202ENST00000342631 KCNH8Q96L42 1107 aa25.08■■□□□ 1.61
SNED1-202ENST00000342631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.08■■□□□ 1.61
SNED1-202ENST00000342631 ITSN2Q9NZM3 1697 aa25.07■■□□□ 1.6
SNED1-202ENST00000342631 ABCA9Q8IUA7 1624 aa25.05■■□□□ 1.6
SNED1-202ENST00000342631 MIA2Q96PC5 1412 aa25.04■■□□□ 1.6
SNED1-202ENST00000342631 RRBP1Q9P2E9 1410 aaKnown RBP25.04■■□□□ 1.6
SNED1-202ENST00000342631 GPATCH8Q9UKJ3 1502 aaKnown RBP25.03■■□□□ 1.6
SNED1-202ENST00000342631 TRIM26Q12899 539 aaPredicted RBP25.03■■□□□ 1.6
SNED1-202ENST00000342631 TTC37Q6PGP7 1564 aa25.03■■□□□ 1.6
SNED1-202ENST00000342631 FGD6Q6ZV73 1430 aa25.02■■□□□ 1.6
SNED1-202ENST00000342631 CDC42BPAQ5VT25 1732 aa25.02■■□□□ 1.6
SNED1-202ENST00000342631 GLI2P10070 1586 aa25.01■■□□□ 1.59
SNED1-202ENST00000342631 MYO5CQ9NQX4 1742 aa25■■□□□ 1.59
SNED1-202ENST00000342631 PREX2Q70Z35 1606 aa24.99■■□□□ 1.59
SNED1-202ENST00000342631 ARAP3Q8WWN8 1544 aa24.99■■□□□ 1.59
SNED1-202ENST00000342631 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.97■■□□□ 1.59
SNED1-202ENST00000342631 PLCH2O75038 1416 aa24.97■■□□□ 1.59
SNED1-202ENST00000342631 CFDP1Q9UEE9 299 aaPredicted RBP24.96■■□□□ 1.59
SNED1-202ENST00000342631 DIP2BQ9P265 1576 aa24.95■■□□□ 1.59
SNED1-202ENST00000342631 CDC42BPBQ9Y5S2 1711 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms