RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 CTTNBP2Q8WZ74 1663 aa30.95■■■□□ 2.55
GTF3C5-201ENST00000342018 CHD1O14646 1710 aa30.95■■■□□ 2.55
GTF3C5-201ENST00000342018 CLIP1P30622 1438 aa30.89■■■□□ 2.54
GTF3C5-201ENST00000342018 CEP170Q5SW79 1584 aa30.88■■■□□ 2.53
GTF3C5-201ENST00000342018 NUP160Q12769 1436 aa30.83■■■□□ 2.53
GTF3C5-201ENST00000342018 IQGAP2Q13576 1575 aa30.8■■■□□ 2.52
GTF3C5-201ENST00000342018 KIAA0586Q9BVV6 1533 aa30.8■■■□□ 2.52
GTF3C5-201ENST00000342018 P3H3Q8IVL6 736 aa30.74■■■□□ 2.51
GTF3C5-201ENST00000342018 ARHGAP35Q9NRY4 1499 aa30.72■■■□□ 2.51
GTF3C5-201ENST00000342018 JPH4Q96JJ6 628 aa30.64■■■□□ 2.5
GTF3C5-201ENST00000342018 ARAP1Q96P48 1450 aa30.63■■■□□ 2.49
GTF3C5-201ENST00000342018 EFCAB5A4FU69 1503 aa30.62■■■□□ 2.49
GTF3C5-201ENST00000342018 UGGT2Q9NYU1 1516 aa30.61■■■□□ 2.49
GTF3C5-201ENST00000342018 FHOD3Q2V2M9 1422 aa30.6■■■□□ 2.49
GTF3C5-201ENST00000342018 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
GTF3C5-201ENST00000342018 SAMD9Q5K651 1589 aa30.58■■■□□ 2.49
GTF3C5-201ENST00000342018 CLASP1Q7Z460 1538 aa30.55■■■□□ 2.48
GTF3C5-201ENST00000342018 DISP1Q96F81 1524 aa30.52■■■□□ 2.48
GTF3C5-201ENST00000342018 TTBK1Q5TCY1 1321 aaPredicted RBP30.52■■■□□ 2.48
GTF3C5-201ENST00000342018 VPS8Q8N3P4 1428 aa30.51■■■□□ 2.47
GTF3C5-201ENST00000342018 KIAA0556O60303 1618 aa30.49■■■□□ 2.47
GTF3C5-201ENST00000342018 PRG4Q92954 1404 aaPredicted RBP30.48■■■□□ 2.47
GTF3C5-201ENST00000342018 CARMIL2Q6F5E8 1435 aa30.47■■■□□ 2.47
GTF3C5-201ENST00000342018 SHROOM2Q13796 1616 aa30.45■■■□□ 2.46
GTF3C5-201ENST00000342018 ATP1B4Q9UN42 357 aaPredicted RBP30.37■■■□□ 2.45
GTF3C5-201ENST00000342018 FMN1Q68DA7 1419 aa30.37■■■□□ 2.45
GTF3C5-201ENST00000342018 ERCC6L2Q5T890 1561 aa30.36■■■□□ 2.45
GTF3C5-201ENST00000342018 PCF11O94913 1555 aaKnown RBP30.3■■■□□ 2.44
GTF3C5-201ENST00000342018 PPARGC1BQ86YN6 1023 aaKnown RBP30.3■■■□□ 2.44
GTF3C5-201ENST00000342018 APLP2Q06481 763 aa30.28■■■□□ 2.44
GTF3C5-201ENST00000342018 CASKIN1Q8WXD9 1431 aa30.25■■■□□ 2.43
GTF3C5-201ENST00000342018 PTPRGP23470 1445 aa30.24■■■□□ 2.43
GTF3C5-201ENST00000342018 FYCO1Q9BQS8 1478 aa30.22■■■□□ 2.43
GTF3C5-201ENST00000342018 PLB1Q6P1J6 1458 aa30.18■■■□□ 2.42
GTF3C5-201ENST00000342018 ARID3CA6NKF2 412 aa30.17■■■□□ 2.42
GTF3C5-201ENST00000342018 RAPGEF6Q8TEU7 1601 aa30.14■■■□□ 2.42
GTF3C5-201ENST00000342018 HECW1Q76N89 1606 aa30.12■■■□□ 2.41
GTF3C5-201ENST00000342018 LRRIQ1Q96JM4 1722 aa30.07■■■□□ 2.4
GTF3C5-201ENST00000342018 ABCA8O94911 1581 aa30.07■■■□□ 2.4
GTF3C5-201ENST00000342018 TIAM1Q13009 1591 aa30.06■■■□□ 2.4
GTF3C5-201ENST00000342018 NUP153P49790 1475 aaKnown RBP30.05■■■□□ 2.4
GTF3C5-201ENST00000342018 KANK4Q5T7N3 995 aaPredicted RBP30.05■■■□□ 2.4
GTF3C5-201ENST00000342018 ARHGEF11O15085 1522 aa30.05■■■□□ 2.4
GTF3C5-201ENST00000342018 UACAQ9BZF9 1416 aa30.04■■■□□ 2.4
GTF3C5-201ENST00000342018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.03■■■□□ 2.4
GTF3C5-201ENST00000342018 HNRNPUL2Q1KMD3 747 aaKnown RBP30.03■■■□□ 2.4
GTF3C5-201ENST00000342018 EPRSP07814 1512 aaKnown RBP30.02■■■□□ 2.4
GTF3C5-201ENST00000342018 CDK13Q14004 1512 aaKnown RBP30.02■■■□□ 2.4
GTF3C5-201ENST00000342018 CFAP43Q8NDM7 1665 aa30.01■■■□□ 2.39
GTF3C5-201ENST00000342018 MAP3K1Q13233 1512 aa30■■■□□ 2.39
GTF3C5-201ENST00000342018 CCDC18Q5T9S5 1454 aa29.99■■■□□ 2.39
GTF3C5-201ENST00000342018 RIMBP3CA6NJZ7 1639 aa29.95■■■□□ 2.38
GTF3C5-201ENST00000342018 RIMBP3BA6NNM3 1639 aa29.95■■■□□ 2.38
GTF3C5-201ENST00000342018 RIMBP3Q9UFD9 1639 aa29.95■■■□□ 2.38
GTF3C5-201ENST00000342018 ABCC2Q92887 1545 aa29.94■■■□□ 2.38
GTF3C5-201ENST00000342018 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
GTF3C5-201ENST00000342018 MTUS2Q5JR59 1369 aa29.9■■■□□ 2.38
GTF3C5-201ENST00000342018 ATP10BO94823 1461 aa29.89■■■□□ 2.38
GTF3C5-201ENST00000342018 UHRF1BP1LA0JNW5 1464 aa29.86■■■□□ 2.37
GTF3C5-201ENST00000342018 CYB5RLQ6IPT4 315 aa29.86■■■□□ 2.37
GTF3C5-201ENST00000342018 ADCY10Q96PN6 1610 aa29.85■■■□□ 2.37
GTF3C5-201ENST00000342018 CDK11AQ9UQ88 783 aaPredicted RBP29.84■■■□□ 2.37
GTF3C5-201ENST00000342018 MAGI3Q5TCQ9 1506 aa29.84■■■□□ 2.37
GTF3C5-201ENST00000342018 EHBP1L1Q8N3D4 1523 aa29.78■■■□□ 2.36
GTF3C5-201ENST00000342018 PLEKHD1A6NEE1 506 aa29.77■■■□□ 2.36
GTF3C5-201ENST00000342018 ZCCHC11Q5TAX3 1644 aaKnown RBP29.76■■■□□ 2.35
GTF3C5-201ENST00000342018 KDM5BQ9UGL1 1544 aa29.75■■■□□ 2.35
GTF3C5-201ENST00000342018 TRIM26Q12899 539 aaPredicted RBP29.73■■■□□ 2.35
GTF3C5-201ENST00000342018 TROQ12816 1431 aaPredicted RBP29.71■■■□□ 2.35
GTF3C5-201ENST00000342018 NPM1P06748 294 aaKnown RBP eCLIP29.71■■■□□ 2.35
GTF3C5-201ENST00000342018 SUPT6HQ7KZ85 1726 aaKnown RBP29.7■■■□□ 2.34
GTF3C5-201ENST00000342018 NCOA2Q15596 1464 aa29.67■■■□□ 2.34
GTF3C5-201ENST00000342018 PHLDB1Q86UU1 1377 aa29.65■■■□□ 2.34
GTF3C5-201ENST00000342018 PCGF6Q9BYE7 350 aa29.65■■■□□ 2.34
GTF3C5-201ENST00000342018 KCNH8Q96L42 1107 aa29.61■■■□□ 2.33
GTF3C5-201ENST00000342018 KIF14Q15058 1648 aa29.61■■■□□ 2.33
GTF3C5-201ENST00000342018 ASXL2Q76L83 1435 aa29.55■■■□□ 2.32
GTF3C5-201ENST00000342018 DNAJC5Q9H3Z4 198 aa29.53■■■□□ 2.32
GTF3C5-201ENST00000342018 WDR7Q9Y4E6 1490 aa29.53■■■□□ 2.32
GTF3C5-201ENST00000342018 CCNB3Q8WWL7 1395 aa29.52■■■□□ 2.32
GTF3C5-201ENST00000342018 MYOM3Q5VTT5 1437 aa29.51■■■□□ 2.31
GTF3C5-201ENST00000342018 RRBP1Q9P2E9 1410 aaKnown RBP29.48■■■□□ 2.31
GTF3C5-201ENST00000342018 FAM50AQ14320 339 aaKnown RBP29.46■■■□□ 2.31
GTF3C5-201ENST00000342018 FGD6Q6ZV73 1430 aa29.46■■■□□ 2.31
GTF3C5-201ENST00000342018 ABCC10Q5T3U5 1492 aa29.46■■■□□ 2.31
GTF3C5-201ENST00000342018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.43■■■□□ 2.35e-6■■■■□ 19.7
GTF3C5-201ENST00000342018 TTC37Q6PGP7 1564 aa29.42■■■□□ 2.3
GTF3C5-201ENST00000342018 GPATCH8Q9UKJ3 1502 aaKnown RBP29.42■■■□□ 2.3
GTF3C5-201ENST00000342018 CFDP1Q9UEE9 299 aaPredicted RBP29.39■■■□□ 2.3
GTF3C5-201ENST00000342018 MAPKBP1O60336 1514 aa29.38■■■□□ 2.29
GTF3C5-201ENST00000342018 ITGAEP38570 1179 aa29.37■■■□□ 2.29
GTF3C5-201ENST00000342018 CDC42BPAQ5VT25 1732 aa29.37■■■□□ 2.29
GTF3C5-201ENST00000342018 ITSN2Q9NZM3 1697 aa29.37■■■□□ 2.29
GTF3C5-201ENST00000342018 ZNF777Q9ULD5 760 aaPredicted RBP29.37■■■□□ 2.29
GTF3C5-201ENST00000342018 PTPN23Q9H3S7 1636 aa29.36■■■□□ 2.29
GTF3C5-201ENST00000342018 MIA2Q96PC5 1412 aa29.35■■■□□ 2.29
GTF3C5-201ENST00000342018 ZNF644Q9H582 1327 aaPredicted RBP29.32■■■□□ 2.28
GTF3C5-201ENST00000342018 MYO5CQ9NQX4 1742 aa29.3■■■□□ 2.28
GTF3C5-201ENST00000342018 PREX2Q70Z35 1606 aa29.29■■■□□ 2.28
GTF3C5-201ENST00000342018 CDC42BPBQ9Y5S2 1711 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms