RNA–Protein interactions for RNA: ENST00000341866.3

LINC01164-201, Transcript of long intergenic non-protein coding RNA 1164, humanhuman

TSL 2 BASIC

Gene LINC01164, Length 3,384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01164-201ENST00000341866 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
LINC01164-201ENST00000341866 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
LINC01164-201ENST00000341866 CARMIL1Q5VZK9 1371 aa18.93■□□□□ 0.62
LINC01164-201ENST00000341866 EIF4G3O43432 1585 aaKnown RBP18.92■□□□□ 0.62
LINC01164-201ENST00000341866 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.61
LINC01164-201ENST00000341866 APLP2Q06481 763 aa18.89■□□□□ 0.61
LINC01164-201ENST00000341866 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
LINC01164-201ENST00000341866 GRIN2BQ13224 1484 aa18.86■□□□□ 0.61
LINC01164-201ENST00000341866 ARAP1Q96P48 1450 aa18.86■□□□□ 0.61
LINC01164-201ENST00000341866 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
LINC01164-201ENST00000341866 SAMD9Q5K651 1589 aa18.84■□□□□ 0.61
LINC01164-201ENST00000341866 CLIP1P30622 1438 aa18.83■□□□□ 0.61
LINC01164-201ENST00000341866 FHAD1B1AJZ9 1412 aa18.82■□□□□ 0.6
LINC01164-201ENST00000341866 ARHGAP35Q9NRY4 1499 aa18.82■□□□□ 0.6
LINC01164-201ENST00000341866 EFCAB5A4FU69 1503 aa18.81■□□□□ 0.6
LINC01164-201ENST00000341866 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
LINC01164-201ENST00000341866 VPS8Q8N3P4 1428 aa18.8■□□□□ 0.6
LINC01164-201ENST00000341866 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
LINC01164-201ENST00000341866 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.6
LINC01164-201ENST00000341866 MAP3K1Q13233 1512 aa18.73■□□□□ 0.59
LINC01164-201ENST00000341866 ITGAEP38570 1179 aa18.72■□□□□ 0.59
LINC01164-201ENST00000341866 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
LINC01164-201ENST00000341866 DIEXFQ68CQ4 756 aaKnown RBP18.7■□□□□ 0.58
LINC01164-201ENST00000341866 SNAPC4Q5SXM2 1469 aa18.68■□□□□ 0.58
LINC01164-201ENST00000341866 UGGT2Q9NYU1 1516 aa18.68■□□□□ 0.58
LINC01164-201ENST00000341866 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
LINC01164-201ENST00000341866 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
LINC01164-201ENST00000341866 GRIN2AQ12879 1464 aa18.66■□□□□ 0.58
LINC01164-201ENST00000341866 IQGAP2Q13576 1575 aa18.65■□□□□ 0.58
LINC01164-201ENST00000341866 CFAP43Q8NDM7 1665 aa18.64■□□□□ 0.57
LINC01164-201ENST00000341866 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
LINC01164-201ENST00000341866 NUP160Q12769 1436 aa18.63■□□□□ 0.57
LINC01164-201ENST00000341866 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
LINC01164-201ENST00000341866 LRRIQ1Q96JM4 1722 aa18.59■□□□□ 0.57
LINC01164-201ENST00000341866 PCF11O94913 1555 aaKnown RBP18.55■□□□□ 0.56
LINC01164-201ENST00000341866 FYCO1Q9BQS8 1478 aa18.55■□□□□ 0.56
LINC01164-201ENST00000341866 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
LINC01164-201ENST00000341866 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
LINC01164-201ENST00000341866 SHROOM2Q13796 1616 aa18.54■□□□□ 0.56
LINC01164-201ENST00000341866 TIAM1Q13009 1591 aa18.54■□□□□ 0.56
LINC01164-201ENST00000341866 DISP1Q96F81 1524 aa18.53■□□□□ 0.56
LINC01164-201ENST00000341866 KIAA0556O60303 1618 aa18.53■□□□□ 0.56
LINC01164-201ENST00000341866 CASKIN1Q8WXD9 1431 aa18.52■□□□□ 0.56
LINC01164-201ENST00000341866 CHD1O14646 1710 aa18.51■□□□□ 0.55
LINC01164-201ENST00000341866 FMN1Q68DA7 1419 aa18.46■□□□□ 0.54
LINC01164-201ENST00000341866 KANK4Q5T7N3 995 aaPredicted RBP18.43■□□□□ 0.54
LINC01164-201ENST00000341866 FHOD3Q2V2M9 1422 aa18.42■□□□□ 0.54
LINC01164-201ENST00000341866 CLASP1Q7Z460 1538 aa18.42■□□□□ 0.54
LINC01164-201ENST00000341866 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
LINC01164-201ENST00000341866 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
LINC01164-201ENST00000341866 LRRC9Q6ZRR7 1453 aa18.38■□□□□ 0.53
LINC01164-201ENST00000341866 HECW1Q76N89 1606 aa18.37■□□□□ 0.53
LINC01164-201ENST00000341866 RRBP1Q9P2E9 1410 aaKnown RBP18.36■□□□□ 0.53
LINC01164-201ENST00000341866 CCDC18Q5T9S5 1454 aa18.33■□□□□ 0.52
LINC01164-201ENST00000341866 RAPGEF6Q8TEU7 1601 aa18.32■□□□□ 0.52
LINC01164-201ENST00000341866 ABCA8O94911 1581 aa18.31■□□□□ 0.52
LINC01164-201ENST00000341866 MIER1Q8N108 512 aa18.3■□□□□ 0.52
LINC01164-201ENST00000341866 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
LINC01164-201ENST00000341866 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.52
LINC01164-201ENST00000341866 ANP32EQ9BTT0 268 aa18.27■□□□□ 0.52
LINC01164-201ENST00000341866 EHBP1L1Q8N3D4 1523 aa18.26■□□□□ 0.51
LINC01164-201ENST00000341866 ADCY10Q96PN6 1610 aa18.26■□□□□ 0.51
LINC01164-201ENST00000341866 EPRSP07814 1512 aaKnown RBP18.25■□□□□ 0.51
LINC01164-201ENST00000341866 NUP153P49790 1475 aaKnown RBP18.23■□□□□ 0.51
LINC01164-201ENST00000341866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.23■□□□□ 0.51
LINC01164-201ENST00000341866 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
LINC01164-201ENST00000341866 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
LINC01164-201ENST00000341866 ARID3CA6NKF2 412 aa18.19■□□□□ 0.5
LINC01164-201ENST00000341866 CARMIL2Q6F5E8 1435 aa18.17■□□□□ 0.5
LINC01164-201ENST00000341866 JPH4Q96JJ6 628 aa18.14■□□□□ 0.5
LINC01164-201ENST00000341866 PHLDB1Q86UU1 1377 aa18.13■□□□□ 0.49
LINC01164-201ENST00000341866 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
LINC01164-201ENST00000341866 ERCC6L2Q5T890 1561 aa18.11■□□□□ 0.49
LINC01164-201ENST00000341866 HIRIP3Q9BW71 556 aaPredicted RBP18.11■□□□□ 0.49
LINC01164-201ENST00000341866 CDK13Q14004 1512 aaKnown RBP18.1■□□□□ 0.49
LINC01164-201ENST00000341866 UHRF1BP1LA0JNW5 1464 aa18.1■□□□□ 0.49
LINC01164-201ENST00000341866 PRG4Q92954 1404 aaPredicted RBP18.1■□□□□ 0.49
LINC01164-201ENST00000341866 PLB1Q6P1J6 1458 aa18.08■□□□□ 0.49
LINC01164-201ENST00000341866 NCOA2Q15596 1464 aa18.08■□□□□ 0.49
LINC01164-201ENST00000341866 TSHZ2Q9NRE2 1034 aa18.07■□□□□ 0.48
LINC01164-201ENST00000341866 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
LINC01164-201ENST00000341866 SUPT16HQ9Y5B9 1047 aaKnown RBP18.04■□□□□ 0.48
LINC01164-201ENST00000341866 ABCC2Q92887 1545 aa18.04■□□□□ 0.48
LINC01164-201ENST00000341866 SIN3AQ96ST3 1273 aa18.03■□□□□ 0.48
LINC01164-201ENST00000341866 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
LINC01164-201ENST00000341866 FGD6Q6ZV73 1430 aa18.03■□□□□ 0.48
LINC01164-201ENST00000341866 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.48
LINC01164-201ENST00000341866 ATP10BO94823 1461 aa18.02■□□□□ 0.48
LINC01164-201ENST00000341866 MIA2Q96PC5 1412 aa18.02■□□□□ 0.47
LINC01164-201ENST00000341866 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
LINC01164-201ENST00000341866 KDM5BQ9UGL1 1544 aa18■□□□□ 0.47
LINC01164-201ENST00000341866 ITSN2Q9NZM3 1697 aa18■□□□□ 0.47
LINC01164-201ENST00000341866 ABCC10Q5T3U5 1492 aa18■□□□□ 0.47
LINC01164-201ENST00000341866 TROQ12816 1431 aaPredicted RBP17.99■□□□□ 0.47
LINC01164-201ENST00000341866 UACAQ9BZF9 1416 aa17.98■□□□□ 0.47
LINC01164-201ENST00000341866 KIF14Q15058 1648 aa17.97■□□□□ 0.47
LINC01164-201ENST00000341866 DHX57Q6P158 1386 aaKnown RBP17.97■□□□□ 0.47
LINC01164-201ENST00000341866 CDC42BPAQ5VT25 1732 aa17.97■□□□□ 0.47
LINC01164-201ENST00000341866 PTPRGP23470 1445 aa17.95■□□□□ 0.46
LINC01164-201ENST00000341866 ZCCHC11Q5TAX3 1644 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms