RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 NPM2Q86SE8 214 aaKnown RBP16.44■□□□□ 0.22
CDH5-201ENST00000341529 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
CDH5-201ENST00000341529 TDRD9Q8NDG6 1382 aaKnown RBP16.44■□□□□ 0.22
CDH5-201ENST00000341529 CUX2O14529 1486 aa16.43■□□□□ 0.22
CDH5-201ENST00000341529 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
CDH5-201ENST00000341529 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
CDH5-201ENST00000341529 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
CDH5-201ENST00000341529 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
CDH5-201ENST00000341529 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
CDH5-201ENST00000341529 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
CDH5-201ENST00000341529 VPS8Q8N3P4 1428 aa16.37■□□□□ 0.21
CDH5-201ENST00000341529 FOXD1Q16676 465 aa16.37■□□□□ 0.21
CDH5-201ENST00000341529 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
CDH5-201ENST00000341529 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDH5-201ENST00000341529 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
CDH5-201ENST00000341529 SUPT16HQ9Y5B9 1047 aaKnown RBP16.34■□□□□ 0.21
CDH5-201ENST00000341529 RAPGEF2Q9Y4G8 1499 aa16.34■□□□□ 0.21
CDH5-201ENST00000341529 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
CDH5-201ENST00000341529 TSPY4P0CV99 314 aa16.32■□□□□ 0.2
CDH5-201ENST00000341529 TSPY10P0CW01 314 aa16.32■□□□□ 0.2
CDH5-201ENST00000341529 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
CDH5-201ENST00000341529 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
CDH5-201ENST00000341529 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
CDH5-201ENST00000341529 CFDP1Q9UEE9 299 aaPredicted RBP16.26■□□□□ 0.19
CDH5-201ENST00000341529 CANXP27824 592 aaKnown RBP16.26■□□□□ 0.19
CDH5-201ENST00000341529 CCDC136Q96JN2 1154 aa16.25■□□□□ 0.19
CDH5-201ENST00000341529 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
CDH5-201ENST00000341529 RAB3GAP2Q9H2M9 1393 aa16.24■□□□□ 0.19
CDH5-201ENST00000341529 NBR1Q14596 966 aa16.22■□□□□ 0.19
CDH5-201ENST00000341529 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
CDH5-201ENST00000341529 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
CDH5-201ENST00000341529 PLEKHD1A6NEE1 506 aa16.19■□□□□ 0.18
CDH5-201ENST00000341529 ANP32AP39687 249 aaKnown RBP16.17■□□□□ 0.18
CDH5-201ENST00000341529 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
CDH5-201ENST00000341529 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
CDH5-201ENST00000341529 SETD5Q9C0A6 1442 aa16.14■□□□□ 0.17
CDH5-201ENST00000341529 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
CDH5-201ENST00000341529 CARD11Q9BXL7 1154 aa16.13■□□□□ 0.17
CDH5-201ENST00000341529 B4GALNT3Q6L9W6 998 aa16.13■□□□□ 0.17
CDH5-201ENST00000341529 HSPA5P11021 654 aaKnown RBP16.12■□□□□ 0.17
CDH5-201ENST00000341529 DHX57Q6P158 1386 aaKnown RBP16.11■□□□□ 0.17
CDH5-201ENST00000341529 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
CDH5-201ENST00000341529 PPP1R15AO75807 674 aaPredicted RBP16.08■□□□□ 0.16
CDH5-201ENST00000341529 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
CDH5-201ENST00000341529 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
CDH5-201ENST00000341529 WDR43Q15061 677 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDH5-201ENST00000341529 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
CDH5-201ENST00000341529 NESP48681 1621 aa16.04■□□□□ 0.16
CDH5-201ENST00000341529 PDS5BQ9NTI5 1447 aa16.03■□□□□ 0.16
CDH5-201ENST00000341529 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
CDH5-201ENST00000341529 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
CDH5-201ENST00000341529 L3MBTL2Q969R5 705 aa16.02■□□□□ 0.16
CDH5-201ENST00000341529 PKD2Q13563 968 aa16.01■□□□□ 0.15
CDH5-201ENST00000341529 NEUROD2Q15784 382 aa16.01■□□□□ 0.15
CDH5-201ENST00000341529 MPHOSPH9Q99550 1183 aa16.01■□□□□ 0.15
CDH5-201ENST00000341529 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
CDH5-201ENST00000341529 TNNT2P45379 298 aaPredicted RBP16■□□□□ 0.15
CDH5-201ENST00000341529 ARXQ96QS3 562 aa15.99■□□□□ 0.15
CDH5-201ENST00000341529 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
CDH5-201ENST00000341529 PLEKHG5O94827 1062 aa15.96■□□□□ 0.15
CDH5-201ENST00000341529 IGF1RP08069 1367 aa15.96■□□□□ 0.15
CDH5-201ENST00000341529 NEFMP07197 916 aa15.94■□□□□ 0.14
CDH5-201ENST00000341529 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
CDH5-201ENST00000341529 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
CDH5-201ENST00000341529 RBM19Q9Y4C8 960 aaKnown RBP15.93■□□□□ 0.14
CDH5-201ENST00000341529 ESF1Q9H501 851 aaKnown RBP15.92■□□□□ 0.14
CDH5-201ENST00000341529 ANP32EQ9BTT0 268 aa15.91■□□□□ 0.14
CDH5-201ENST00000341529 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
CDH5-201ENST00000341529 NCAPD3P42695 1498 aa15.9■□□□□ 0.14
CDH5-201ENST00000341529 TIMELESSQ9UNS1 1208 aa15.9■□□□□ 0.14
CDH5-201ENST00000341529 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.14
CDH5-201ENST00000341529 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
CDH5-201ENST00000341529 KNSTRNQ9Y448 316 aa15.89■□□□□ 0.13
CDH5-201ENST00000341529 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
CDH5-201ENST00000341529 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.13
CDH5-201ENST00000341529 BICRAQ9NZM4 1560 aa15.89■□□□□ 0.13
CDH5-201ENST00000341529 HNRNPMP52272 730 aaKnown RBP eCLIP15.88■□□□□ 0.13
CDH5-201ENST00000341529 PHLDB1Q86UU1 1377 aa15.88■□□□□ 0.13
CDH5-201ENST00000341529 ZNF644Q9H582 1327 aaPredicted RBP15.87■□□□□ 0.13
CDH5-201ENST00000341529 PPM1GO15355 546 aaPredicted RBP15.87■□□□□ 0.13
CDH5-201ENST00000341529 KIF21BO75037 1637 aa15.86■□□□□ 0.13
CDH5-201ENST00000341529 RGS3P49796 1198 aa15.86■□□□□ 0.13
CDH5-201ENST00000341529 SAFB2Q14151 953 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDH5-201ENST00000341529 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
CDH5-201ENST00000341529 ARAP1Q96P48 1450 aa15.85■□□□□ 0.13
CDH5-201ENST00000341529 MLECQ14165 292 aa15.84■□□□□ 0.13
CDH5-201ENST00000341529 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
CDH5-201ENST00000341529 NUP155O75694 1391 aa15.84■□□□□ 0.13
CDH5-201ENST00000341529 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.81■□□□□ 0.12
CDH5-201ENST00000341529 FRAT1Q92837 279 aaPredicted RBP15.8■□□□□ 0.12
CDH5-201ENST00000341529 GGT6Q6P531 493 aa15.78■□□□□ 0.12
CDH5-201ENST00000341529 CC2D2AQ9P2K1 1620 aa15.76■□□□□ 0.11
CDH5-201ENST00000341529 ST20-MTHFSA0A0A6YYL1 179 aa15.76■□□□□ 0.11
CDH5-201ENST00000341529 HSP90AA1P07900 732 aaKnown RBP15.76■□□□□ 0.11
CDH5-201ENST00000341529 ARID4BQ4LE39 1312 aaPredicted RBP15.76■□□□□ 0.11
CDH5-201ENST00000341529 EIF5BO60841 1220 aaKnown RBP15.76■□□□□ 0.11
CDH5-201ENST00000341529 CFTRP13569 1480 aa15.74■□□□□ 0.11
CDH5-201ENST00000341529 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
CDH5-201ENST00000341529 NUTM2DQ5VT03 806 aaPredicted RBP15.73■□□□□ 0.11
CDH5-201ENST00000341529 UPF2Q9HAU5 1272 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms