RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 KCNA4P22459 653 aa6.81□□□□□ -1.32
CCDC66-202ENST00000341455 EIF4G3O43432 1585 aaKnown RBP6.8□□□□□ -1.32
CCDC66-202ENST00000341455 URB2Q14146 1524 aaKnown RBP6.79□□□□□ -1.32
CCDC66-202ENST00000341455 ARAP1Q96P48 1450 aa6.78□□□□□ -1.32
CCDC66-202ENST00000341455 DNMBPQ6XZF7 1577 aa6.78□□□□□ -1.32
CCDC66-202ENST00000341455 FANCD2Q9BXW9 1451 aa6.78□□□□□ -1.32
CCDC66-202ENST00000341455 TOP2AP11388 1531 aaKnown RBP6.78□□□□□ -1.32
CCDC66-202ENST00000341455 SHROOM2Q13796 1616 aa6.77□□□□□ -1.33
CCDC66-202ENST00000341455 HAX1O00165 279 aa6.77□□□□□ -1.33
CCDC66-202ENST00000341455 PITPNM1O00562 1244 aa6.76□□□□□ -1.33
CCDC66-202ENST00000341455 OSCARQ8IYS5 282 aa6.75□□□□□ -1.33
CCDC66-202ENST00000341455 SYNJ1O43426 1573 aa6.75□□□□□ -1.33
CCDC66-202ENST00000341455 ATXN8OSP0DMR3 200 aa6.74□□□□□ -1.33
CCDC66-202ENST00000341455 SPDYE2BA6NHP3 402 aa6.73□□□□□ -1.33
CCDC66-202ENST00000341455 SPDYE6P0CI01 402 aa6.73□□□□□ -1.33
CCDC66-202ENST00000341455 SPDYE2Q495Y8 402 aa6.73□□□□□ -1.33
CCDC66-202ENST00000341455 C19orf67A6NJJ6 358 aa6.73□□□□□ -1.33
CCDC66-202ENST00000341455 MROH2BQ7Z745 1585 aa6.73□□□□□ -1.33
CCDC66-202ENST00000341455 ERCC6L2Q5T890 1561 aa6.72□□□□□ -1.33
CCDC66-202ENST00000341455 MAGI1Q96QZ7 1491 aaPredicted RBP6.71□□□□□ -1.33
CCDC66-202ENST00000341455 KIF13AQ9H1H9 1805 aa6.7□□□□□ -1.34
CCDC66-202ENST00000341455 SLC24A1O60721 1099 aa6.69□□□□□ -1.34
CCDC66-202ENST00000341455 FOXD4L1Q9NU39 408 aa6.68□□□□□ -1.34
CCDC66-202ENST00000341455 TOPBP1Q92547 1522 aa6.68□□□□□ -1.34
CCDC66-202ENST00000341455 MAPKBP1O60336 1514 aa6.67□□□□□ -1.34
CCDC66-202ENST00000341455 SPDYE1Q8NFV5 336 aaPredicted RBP6.67□□□□□ -1.34
CCDC66-202ENST00000341455 PBRM1Q86U86 1689 aa6.66□□□□□ -1.34
CCDC66-202ENST00000341455 DCAF8L2P0C7V8 631 aa6.65□□□□□ -1.34
CCDC66-202ENST00000341455 LHX8Q68G74 356 aa6.65□□□□□ -1.35
CCDC66-202ENST00000341455 ABCA5Q8WWZ7 1642 aa6.64□□□□□ -1.35
CCDC66-202ENST00000341455 WIZO95785 1651 aa6.63□□□□□ -1.35
CCDC66-202ENST00000341455 GLI2P10070 1586 aa6.62□□□□□ -1.35
CCDC66-202ENST00000341455 FBLN2P98095 1184 aa6.62□□□□□ -1.35
CCDC66-202ENST00000341455 TRIM41Q8WV44 630 aa6.6□□□□□ -1.35
CCDC66-202ENST00000341455 SYNJ2O15056 1496 aa6.6□□□□□ -1.35
CCDC66-202ENST00000341455 GABBR2O75899 941 aa6.59□□□□□ -1.35
CCDC66-202ENST00000341455 SSUH2Q9Y2M2 353 aa6.58□□□□□ -1.36
CCDC66-202ENST00000341455 ZNF608Q9ULD9 1512 aaPredicted RBP6.58□□□□□ -1.36
CCDC66-202ENST00000341455 PRKAR2AP13861 404 aaKnown RBP6.57□□□□□ -1.36
CCDC66-202ENST00000341455 DIP2BQ9P265 1576 aa6.56□□□□□ -1.36
CCDC66-202ENST00000341455 EVX2Q03828 476 aa6.56□□□□□ -1.36
CCDC66-202ENST00000341455 ATF5Q9Y2D1 282 aaPredicted RBP6.56□□□□□ -1.36
CCDC66-202ENST00000341455 NUP160Q12769 1436 aa6.56□□□□□ -1.36
CCDC66-202ENST00000341455 ADAMTS12P58397 1594 aa6.56□□□□□ -1.36
CCDC66-202ENST00000341455 GRIN2BQ13224 1484 aa6.55□□□□□ -1.36
CCDC66-202ENST00000341455 CSRNP3Q8WYN3 585 aa6.55□□□□□ -1.36
CCDC66-202ENST00000341455 POLA1P09884 1462 aaPredicted RBP6.54□□□□□ -1.36
CCDC66-202ENST00000341455 PCDH10Q9P2E7 1040 aa6.53□□□□□ -1.36
CCDC66-202ENST00000341455 PPRC1Q5VV67 1664 aaKnown RBP6.53□□□□□ -1.36
CCDC66-202ENST00000341455 ABCC10Q5T3U5 1492 aa6.52□□□□□ -1.37
CCDC66-202ENST00000341455 ABCA10Q8WWZ4 1543 aa6.52□□□□□ -1.37
CCDC66-202ENST00000341455 KIAA0586Q9BVV6 1533 aa6.52□□□□□ -1.37
CCDC66-202ENST00000341455 GAPVD1Q14C86 1478 aa6.51□□□□□ -1.37
CCDC66-202ENST00000341455 CEP170Q5SW79 1584 aa6.51□□□□□ -1.37
CCDC66-202ENST00000341455 TOP2BQ02880 1626 aa6.51□□□□□ -1.37
CCDC66-202ENST00000341455 BIVM-ERCC5R4GMW8 1640 aa6.51□□□□□ -1.37
CCDC66-202ENST00000341455 ERICH3Q5RHP9 1530 aa6.51□□□□□ -1.37
CCDC66-202ENST00000341455 SNAPC4Q5SXM2 1469 aa6.49□□□□□ -1.37
CCDC66-202ENST00000341455 MAP3K4Q9Y6R4 1608 aa6.48□□□□□ -1.37
CCDC66-202ENST00000341455 SLC4A1APQ9BWU0 796 aaKnown RBP6.47□□□□□ -1.37
CCDC66-202ENST00000341455 RUSC2Q8N2Y8 1516 aa6.47□□□□□ -1.37
CCDC66-202ENST00000341455 KDM6BO15054 1643 aa6.47□□□□□ -1.37
CCDC66-202ENST00000341455 UHRF1BP1LA0JNW5 1464 aa6.46□□□□□ -1.37
CCDC66-202ENST00000341455 CCDC88BA6NC98 1476 aa6.45□□□□□ -1.38
CCDC66-202ENST00000341455 GRIN2AQ12879 1464 aa6.45□□□□□ -1.38
CCDC66-202ENST00000341455 ADCY10Q96PN6 1610 aa6.43□□□□□ -1.38
CCDC66-202ENST00000341455 ZNF579Q8NAF0 562 aaKnown RBP6.42□□□□□ -1.38
CCDC66-202ENST00000341455 ZNF692Q9BU19 519 aaPredicted RBP6.42□□□□□ -1.38
CCDC66-202ENST00000341455 HECW2Q9P2P5 1572 aa6.41□□□□□ -1.38
CCDC66-202ENST00000341455 CUX1P39880 1505 aa6.41□□□□□ -1.38
CCDC66-202ENST00000341455 IQSEC2Q5JU85 1478 aa6.41□□□□□ -1.38
CCDC66-202ENST00000341455 CUL7Q14999 1698 aa6.4□□□□□ -1.38
CCDC66-202ENST00000341455 CFAP43Q8NDM7 1665 aa6.4□□□□□ -1.38
CCDC66-202ENST00000341455 FGD5Q6ZNL6 1462 aa6.4□□□□□ -1.39
CCDC66-202ENST00000341455 PRR29P0C7W0 189 aa6.39□□□□□ -1.39
CCDC66-202ENST00000341455 FHAD1B1AJZ9 1412 aa6.39□□□□□ -1.39
CCDC66-202ENST00000341455 ADAMTSL3P82987 1691 aa6.39□□□□□ -1.39
CCDC66-202ENST00000341455 POTEIP0CG38 1075 aa6.38□□□□□ -1.39
CCDC66-202ENST00000341455 RTN4Q9NQC3 1192 aaKnown RBP6.38□□□□□ -1.39
CCDC66-202ENST00000341455 CLEC11AQ9Y240 323 aa6.38□□□□□ -1.39
CCDC66-202ENST00000341455 AQRO60306 1485 aaKnown RBP eCLIP6.38□□□□□ -1.391e-6■■■■■ 61.2
CCDC66-202ENST00000341455 SOGA1O94964 1423 aa6.37□□□□□ -1.39
CCDC66-202ENST00000341455 TEX14Q8IWB6 1497 aa6.36□□□□□ -1.39
CCDC66-202ENST00000341455 CD44P16070 742 aaKnown RBP6.36□□□□□ -1.39
CCDC66-202ENST00000341455 FARP1Q9Y4F1 1045 aaPredicted RBP6.36□□□□□ -1.39
CCDC66-202ENST00000341455 MKRN4PQ13434 485 aaPredicted RBP6.34□□□□□ -1.39
CCDC66-202ENST00000341455 PLB1Q6P1J6 1458 aa6.34□□□□□ -1.39
CCDC66-202ENST00000341455 MAGI3Q5TCQ9 1506 aa6.34□□□□□ -1.4
CCDC66-202ENST00000341455 ADGRL1O94910 1474 aa6.34□□□□□ -1.4
CCDC66-202ENST00000341455 STAG3Q9UJ98 1225 aa6.33□□□□□ -1.4
CCDC66-202ENST00000341455 DCBLD2Q96PD2 775 aa6.32□□□□□ -1.4
CCDC66-202ENST00000341455 KDM5BQ9UGL1 1544 aa6.32□□□□□ -1.4
CCDC66-202ENST00000341455 PHLDB1Q86UU1 1377 aa6.31□□□□□ -1.4
CCDC66-202ENST00000341455 AMER1Q5JTC6 1135 aaPredicted RBP6.31□□□□□ -1.4
CCDC66-202ENST00000341455 CYB5RLQ6IPT4 315 aa6.31□□□□□ -1.4
CCDC66-202ENST00000341455 ARAP3Q8WWN8 1544 aa6.3□□□□□ -1.4
CCDC66-202ENST00000341455 MAMSTRQ6ZN01 415 aa6.3□□□□□ -1.4
CCDC66-202ENST00000341455 ABCC2Q92887 1545 aa6.3□□□□□ -1.4
CCDC66-202ENST00000341455 RAD54L2Q9Y4B4 1467 aa6.3□□□□□ -1.4
CCDC66-202ENST00000341455 ILDR1Q86SU0 546 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms