RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 ARAP1Q96P48 1450 aa15.69■□□□□ 0.1
CAPRIN1-201ENST00000341394 PBRM1Q86U86 1689 aa15.68■□□□□ 0.1
CAPRIN1-201ENST00000341394 ARHGAP35Q9NRY4 1499 aa15.66■□□□□ 0.1
CAPRIN1-201ENST00000341394 GTF3C3Q9Y5Q9 886 aa15.66■□□□□ 0.1
CAPRIN1-201ENST00000341394 CUL7Q14999 1698 aa15.65■□□□□ 0.1
CAPRIN1-201ENST00000341394 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
CAPRIN1-201ENST00000341394 FBLN2P98095 1184 aa15.64■□□□□ 0.09
CAPRIN1-201ENST00000341394 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
CAPRIN1-201ENST00000341394 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
CAPRIN1-201ENST00000341394 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
CAPRIN1-201ENST00000341394 P3H3Q8IVL6 736 aa15.6■□□□□ 0.09
CAPRIN1-201ENST00000341394 CTTNBP2Q8WZ74 1663 aa15.59■□□□□ 0.09
CAPRIN1-201ENST00000341394 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
CAPRIN1-201ENST00000341394 DIEXFQ68CQ4 756 aaKnown RBP15.57■□□□□ 0.08
CAPRIN1-201ENST00000341394 ITGAEP38570 1179 aa15.56■□□□□ 0.08
CAPRIN1-201ENST00000341394 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
CAPRIN1-201ENST00000341394 GRIN2BQ13224 1484 aa15.52■□□□□ 0.08
CAPRIN1-201ENST00000341394 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
CAPRIN1-201ENST00000341394 FHOD3Q2V2M9 1422 aa15.52■□□□□ 0.07
CAPRIN1-201ENST00000341394 KANK4Q5T7N3 995 aaPredicted RBP15.51■□□□□ 0.07
CAPRIN1-201ENST00000341394 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
CAPRIN1-201ENST00000341394 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
CAPRIN1-201ENST00000341394 CNGB1Q14028 1251 aaPredicted RBP15.49■□□□□ 0.07
CAPRIN1-201ENST00000341394 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
CAPRIN1-201ENST00000341394 BCANQ96GW7 911 aa15.45■□□□□ 0.06
CAPRIN1-201ENST00000341394 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
CAPRIN1-201ENST00000341394 SAMD9Q5K651 1589 aa15.42■□□□□ 0.06
CAPRIN1-201ENST00000341394 LRRIQ1Q96JM4 1722 aa15.42■□□□□ 0.06
CAPRIN1-201ENST00000341394 GRIN2AQ12879 1464 aa15.41■□□□□ 0.06
CAPRIN1-201ENST00000341394 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
CAPRIN1-201ENST00000341394 IQGAP2Q13576 1575 aa15.39■□□□□ 0.05
CAPRIN1-201ENST00000341394 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
CAPRIN1-201ENST00000341394 EFCAB5A4FU69 1503 aa15.37■□□□□ 0.05
CAPRIN1-201ENST00000341394 ERICH6Q7L0X2 663 aa15.36■□□□□ 0.05
CAPRIN1-201ENST00000341394 MAGI1Q96QZ7 1491 aaPredicted RBP15.35■□□□□ 0.05
CAPRIN1-201ENST00000341394 TIAM1Q13009 1591 aa15.35■□□□□ 0.05
CAPRIN1-201ENST00000341394 SYNJ2O15056 1496 aa15.34■□□□□ 0.05
CAPRIN1-201ENST00000341394 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
CAPRIN1-201ENST00000341394 ARID3CA6NKF2 412 aa15.32■□□□□ 0.04
CAPRIN1-201ENST00000341394 DISP1Q96F81 1524 aa15.3■□□□□ 0.04
CAPRIN1-201ENST00000341394 CFAP43Q8NDM7 1665 aa15.3■□□□□ 0.04
CAPRIN1-201ENST00000341394 CHD1O14646 1710 aa15.3■□□□□ 0.04
CAPRIN1-201ENST00000341394 KIAA0586Q9BVV6 1533 aa15.29■□□□□ 0.04
CAPRIN1-201ENST00000341394 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
CAPRIN1-201ENST00000341394 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.04
CAPRIN1-201ENST00000341394 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.04
CAPRIN1-201ENST00000341394 FYCO1Q9BQS8 1478 aa15.27■□□□□ 0.03
CAPRIN1-201ENST00000341394 KIAA0556O60303 1618 aa15.26■□□□□ 0.03
CAPRIN1-201ENST00000341394 NUP160Q12769 1436 aa15.25■□□□□ 0.03
CAPRIN1-201ENST00000341394 FMN1Q68DA7 1419 aa15.24■□□□□ 0.03
CAPRIN1-201ENST00000341394 PHLDB1Q86UU1 1377 aa15.24■□□□□ 0.03
CAPRIN1-201ENST00000341394 MYT1Q01538 1121 aa15.24■□□□□ 0.03
CAPRIN1-201ENST00000341394 MAGI3Q5TCQ9 1506 aa15.23■□□□□ 0.03
CAPRIN1-201ENST00000341394 MAP3K1Q13233 1512 aa15.21■□□□□ 0.03
CAPRIN1-201ENST00000341394 CDK13Q14004 1512 aaKnown RBP15.21■□□□□ 0.03
CAPRIN1-201ENST00000341394 NEFLP07196 543 aa15.2■□□□□ 0.02
CAPRIN1-201ENST00000341394 JPH4Q96JJ6 628 aa15.19■□□□□ 0.02
CAPRIN1-201ENST00000341394 RRBP1Q9P2E9 1410 aaKnown RBP15.17■□□□□ 0.02
CAPRIN1-201ENST00000341394 PLB1Q6P1J6 1458 aa15.16■□□□□ 0.02
CAPRIN1-201ENST00000341394 ERCC6L2Q5T890 1561 aa15.16■□□□□ 0.02
CAPRIN1-201ENST00000341394 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
CAPRIN1-201ENST00000341394 POLR3GLQ9BT43 218 aa15.14■□□□□ 0.01
CAPRIN1-201ENST00000341394 EPRSP07814 1512 aaKnown RBP15.14■□□□□ 0.01
CAPRIN1-201ENST00000341394 NUP153P49790 1475 aaKnown RBP15.13■□□□□ 0.01
CAPRIN1-201ENST00000341394 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
CAPRIN1-201ENST00000341394 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
CAPRIN1-201ENST00000341394 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
CAPRIN1-201ENST00000341394 RAPGEF6Q8TEU7 1601 aa15.11■□□□□ 0.01
CAPRIN1-201ENST00000341394 CARMIL2Q6F5E8 1435 aa15.09■□□□□ 0.01
CAPRIN1-201ENST00000341394 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
CAPRIN1-201ENST00000341394 NCOA2Q15596 1464 aa15.07■□□□□ 0
CAPRIN1-201ENST00000341394 CDK11AQ9UQ88 783 aaPredicted RBP15.07■□□□□ 0
CAPRIN1-201ENST00000341394 SHROOM2Q13796 1616 aa15.05■□□□□ -0
CAPRIN1-201ENST00000341394 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
CAPRIN1-201ENST00000341394 SUPT6HQ7KZ85 1726 aaKnown RBP15.04■□□□□ -0
CAPRIN1-201ENST00000341394 EHBP1L1Q8N3D4 1523 aa15.04■□□□□ -0
CAPRIN1-201ENST00000341394 CCDC18Q5T9S5 1454 aa15.03■□□□□ -0
CAPRIN1-201ENST00000341394 ARHGEF11O15085 1522 aa15.03■□□□□ -0
CAPRIN1-201ENST00000341394 CLASP1Q7Z460 1538 aa15.02□□□□□ -0.01
CAPRIN1-201ENST00000341394 FGD6Q6ZV73 1430 aa15.02□□□□□ -0.01
CAPRIN1-201ENST00000341394 ABCA8O94911 1581 aa15.01□□□□□ -0.01
CAPRIN1-201ENST00000341394 PTPRKQ15262 1439 aa15.01□□□□□ -0.01
CAPRIN1-201ENST00000341394 MIER1Q8N108 512 aa15□□□□□ -0.01
CAPRIN1-201ENST00000341394 KIF14Q15058 1648 aa14.99□□□□□ -0.01
CAPRIN1-201ENST00000341394 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
CAPRIN1-201ENST00000341394 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
CAPRIN1-201ENST00000341394 PTPRGP23470 1445 aa14.97□□□□□ -0.01
CAPRIN1-201ENST00000341394 PLEKHD1A6NEE1 506 aa14.96□□□□□ -0.01
CAPRIN1-201ENST00000341394 ATP10BO94823 1461 aa14.96□□□□□ -0.02
CAPRIN1-201ENST00000341394 PTPN23Q9H3S7 1636 aa14.95□□□□□ -0.02
CAPRIN1-201ENST00000341394 ZNF644Q9H582 1327 aaPredicted RBP14.94□□□□□ -0.02
CAPRIN1-201ENST00000341394 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
CAPRIN1-201ENST00000341394 RAB3GAP2Q9H2M9 1393 aa14.93□□□□□ -0.02
CAPRIN1-201ENST00000341394 DHX57Q6P158 1386 aaKnown RBP14.93□□□□□ -0.02
CAPRIN1-201ENST00000341394 HIRIP3Q9BW71 556 aaPredicted RBP14.92□□□□□ -0.02
CAPRIN1-201ENST00000341394 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
CAPRIN1-201ENST00000341394 TROQ12816 1431 aaPredicted RBP14.89□□□□□ -0.03
CAPRIN1-201ENST00000341394 CHIC2Q9UKJ5 165 aa14.87□□□□□ -0.03
CAPRIN1-201ENST00000341394 SENP3-EIF4A1A0A087X0R7 540 aa14.86□□□□□ -0.03
CAPRIN1-201ENST00000341394 UACAQ9BZF9 1416 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms