RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 VPS8Q8N3P4 1428 aa29.69■■■□□ 2.34
NHLRC1-201ENST00000340650 ZNF608Q9ULD9 1512 aaPredicted RBP29.67■■■□□ 2.34
NHLRC1-201ENST00000340650 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
NHLRC1-201ENST00000340650 NEUROD1Q13562 356 aa29.61■■■□□ 2.33
NHLRC1-201ENST00000340650 ARHGAP35Q9NRY4 1499 aa29.61■■■□□ 2.33
NHLRC1-201ENST00000340650 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
NHLRC1-201ENST00000340650 DIEXFQ68CQ4 756 aaKnown RBP29.57■■■□□ 2.32
NHLRC1-201ENST00000340650 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
NHLRC1-201ENST00000340650 CENPBP07199 599 aaPredicted RBP29.49■■■□□ 2.31
NHLRC1-201ENST00000340650 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
NHLRC1-201ENST00000340650 FHAD1B1AJZ9 1412 aa29.48■■■□□ 2.31
NHLRC1-201ENST00000340650 APLP2Q06481 763 aa29.47■■■□□ 2.31
NHLRC1-201ENST00000340650 CTTNBP2Q8WZ74 1663 aa29.46■■■□□ 2.31
NHLRC1-201ENST00000340650 ADAMTS12P58397 1594 aa29.46■■■□□ 2.31
NHLRC1-201ENST00000340650 P3H3Q8IVL6 736 aa29.45■■■□□ 2.31
NHLRC1-201ENST00000340650 SNAPC4Q5SXM2 1469 aa29.4■■■□□ 2.3
NHLRC1-201ENST00000340650 GTF3C3Q9Y5Q9 886 aa29.36■■■□□ 2.29
NHLRC1-201ENST00000340650 FHOD3Q2V2M9 1422 aa29.34■■■□□ 2.29
NHLRC1-201ENST00000340650 EFCAB5A4FU69 1503 aa29.3■■■□□ 2.28
NHLRC1-201ENST00000340650 ZNF316A6NFI3 1004 aaPredicted RBP29.26■■■□□ 2.27
NHLRC1-201ENST00000340650 KANK4Q5T7N3 995 aaPredicted RBP29.24■■■□□ 2.27
NHLRC1-201ENST00000340650 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
NHLRC1-201ENST00000340650 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
NHLRC1-201ENST00000340650 FBLN2P98095 1184 aa29.21■■■□□ 2.27
NHLRC1-201ENST00000340650 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.27
NHLRC1-201ENST00000340650 IQGAP2Q13576 1575 aa29.19■■■□□ 2.26
NHLRC1-201ENST00000340650 SAMD9Q5K651 1589 aa29.18■■■□□ 2.26
NHLRC1-201ENST00000340650 ATP1B4Q9UN42 357 aaPredicted RBP29.18■■■□□ 2.26
NHLRC1-201ENST00000340650 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
NHLRC1-201ENST00000340650 PCF11O94913 1555 aaKnown RBP29.16■■■□□ 2.26
NHLRC1-201ENST00000340650 FMN1Q68DA7 1419 aa29.09■■■□□ 2.25
NHLRC1-201ENST00000340650 KIAA0586Q9BVV6 1533 aa29.08■■■□□ 2.25
NHLRC1-201ENST00000340650 TIAM1Q13009 1591 aa29.07■■■□□ 2.24
NHLRC1-201ENST00000340650 CASKIN1Q8WXD9 1431 aa29.06■■■□□ 2.24
NHLRC1-201ENST00000340650 FYCO1Q9BQS8 1478 aa29.05■■■□□ 2.24
NHLRC1-201ENST00000340650 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
NHLRC1-201ENST00000340650 MYT1Q01538 1121 aa29.01■■■□□ 2.24
NHLRC1-201ENST00000340650 MAP3K1Q13233 1512 aa29■■■□□ 2.23
NHLRC1-201ENST00000340650 UGGT2Q9NYU1 1516 aa29■■■□□ 2.23
NHLRC1-201ENST00000340650 LRRC9Q6ZRR7 1453 aa28.96■■■□□ 2.23
NHLRC1-201ENST00000340650 NUP160Q12769 1436 aa28.95■■■□□ 2.22
NHLRC1-201ENST00000340650 CFAP43Q8NDM7 1665 aa28.95■■■□□ 2.22
NHLRC1-201ENST00000340650 HNRNPUL2Q1KMD3 747 aaKnown RBP28.93■■■□□ 2.22
NHLRC1-201ENST00000340650 DISP1Q96F81 1524 aa28.92■■■□□ 2.22
NHLRC1-201ENST00000340650 KIAA0556O60303 1618 aa28.89■■■□□ 2.21
NHLRC1-201ENST00000340650 MIER1Q8N108 512 aa28.86■■■□□ 2.21
NHLRC1-201ENST00000340650 JPH4Q96JJ6 628 aa28.84■■■□□ 2.21
NHLRC1-201ENST00000340650 LRRIQ1Q96JM4 1722 aa28.84■■■□□ 2.21
NHLRC1-201ENST00000340650 CHD1O14646 1710 aa28.81■■■□□ 2.2
NHLRC1-201ENST00000340650 RRBP1Q9P2E9 1410 aaKnown RBP28.8■■■□□ 2.2
NHLRC1-201ENST00000340650 YTHDC1Q96MU7 727 aaKnown RBP28.8■■■□□ 2.2
NHLRC1-201ENST00000340650 ARID3CA6NKF2 412 aa28.79■■■□□ 2.2
NHLRC1-201ENST00000340650 PHLDB1Q86UU1 1377 aa28.78■■■□□ 2.2
NHLRC1-201ENST00000340650 CCNB3Q8WWL7 1395 aa28.76■■■□□ 2.19
NHLRC1-201ENST00000340650 MTUS2Q5JR59 1369 aa28.76■■■□□ 2.19
NHLRC1-201ENST00000340650 HECW1Q76N89 1606 aa28.75■■■□□ 2.19
NHLRC1-201ENST00000340650 CARMIL2Q6F5E8 1435 aa28.72■■■□□ 2.19
NHLRC1-201ENST00000340650 EPRSP07814 1512 aaKnown RBP28.7■■■□□ 2.18
NHLRC1-201ENST00000340650 CCDC18Q5T9S5 1454 aa28.69■■■□□ 2.18
NHLRC1-201ENST00000340650 CDK13Q14004 1512 aaKnown RBP28.69■■■□□ 2.18
NHLRC1-201ENST00000340650 ITGAEP38570 1179 aa28.66■■■□□ 2.18
NHLRC1-201ENST00000340650 CLSPNQ9HAW4 1339 aa28.65■■■□□ 2.18
NHLRC1-201ENST00000340650 MAGI3Q5TCQ9 1506 aa28.65■■■□□ 2.18
NHLRC1-201ENST00000340650 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
NHLRC1-201ENST00000340650 PLB1Q6P1J6 1458 aa28.63■■■□□ 2.17
NHLRC1-201ENST00000340650 RAPGEF6Q8TEU7 1601 aa28.62■■■□□ 2.17
NHLRC1-201ENST00000340650 NUP153P49790 1475 aaKnown RBP28.62■■■□□ 2.17
NHLRC1-201ENST00000340650 EHBP1L1Q8N3D4 1523 aa28.61■■■□□ 2.17
NHLRC1-201ENST00000340650 FAM50AQ14320 339 aaKnown RBP28.61■■■□□ 2.17
NHLRC1-201ENST00000340650 NCOA2Q15596 1464 aa28.58■■■□□ 2.17
NHLRC1-201ENST00000340650 SUPT6HQ7KZ85 1726 aaKnown RBP28.54■■■□□ 2.16
NHLRC1-201ENST00000340650 DHX57Q6P158 1386 aaKnown RBP28.51■■■□□ 2.15
NHLRC1-201ENST00000340650 FGD6Q6ZV73 1430 aa28.5■■■□□ 2.15
NHLRC1-201ENST00000340650 SHROOM2Q13796 1616 aa28.48■■■□□ 2.15
NHLRC1-201ENST00000340650 PTPRGP23470 1445 aa28.47■■■□□ 2.15
NHLRC1-201ENST00000340650 MYOM3Q5VTT5 1437 aa28.46■■■□□ 2.15
NHLRC1-201ENST00000340650 ARHGEF11O15085 1522 aa28.45■■■□□ 2.14
NHLRC1-201ENST00000340650 ERCC6L2Q5T890 1561 aa28.44■■■□□ 2.14
NHLRC1-201ENST00000340650 ABCA8O94911 1581 aa28.43■■■□□ 2.14
NHLRC1-201ENST00000340650 CLASP1Q7Z460 1538 aa28.43■■■□□ 2.14
NHLRC1-201ENST00000340650 CDK11AQ9UQ88 783 aaPredicted RBP28.42■■■□□ 2.14
NHLRC1-201ENST00000340650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.37■■■□□ 2.13
NHLRC1-201ENST00000340650 ATP10BO94823 1461 aa28.32■■■□□ 2.12
NHLRC1-201ENST00000340650 TROQ12816 1431 aaPredicted RBP28.32■■■□□ 2.12
NHLRC1-201ENST00000340650 PTPN23Q9H3S7 1636 aa28.31■■■□□ 2.12
NHLRC1-201ENST00000340650 RAB3GAP2Q9H2M9 1393 aa28.28■■■□□ 2.12
NHLRC1-201ENST00000340650 UACAQ9BZF9 1416 aa28.28■■■□□ 2.12
NHLRC1-201ENST00000340650 PLEKHD1A6NEE1 506 aa28.25■■■□□ 2.11
NHLRC1-201ENST00000340650 PTPRKQ15262 1439 aa28.25■■■□□ 2.11
NHLRC1-201ENST00000340650 SETD5Q9C0A6 1442 aa28.25■■■□□ 2.11
NHLRC1-201ENST00000340650 KIF14Q15058 1648 aa28.24■■■□□ 2.11
NHLRC1-201ENST00000340650 MIA2Q96PC5 1412 aa28.22■■■□□ 2.11
NHLRC1-201ENST00000340650 TCOF1Q13428 1488 aaKnown RBP28.21■■■□□ 2.11
NHLRC1-201ENST00000340650 SUPT16HQ9Y5B9 1047 aaKnown RBP28.2■■■□□ 2.1
NHLRC1-201ENST00000340650 ADCY10Q96PN6 1610 aa28.16■■■□□ 2.1
NHLRC1-201ENST00000340650 OSCARQ8IYS5 282 aa28.16■■■□□ 2.1
NHLRC1-201ENST00000340650 ABCC2Q92887 1545 aa28.16■■■□□ 2.1
NHLRC1-201ENST00000340650 ZNF644Q9H582 1327 aaPredicted RBP28.16■■■□□ 2.1
NHLRC1-201ENST00000340650 CHIC2Q9UKJ5 165 aa28.13■■■□□ 2.09
NHLRC1-201ENST00000340650 GPATCH8Q9UKJ3 1502 aaKnown RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms