RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
C2orf88-201ENST00000340623 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
C2orf88-201ENST00000340623 BIVM-ERCC5R4GMW8 1640 aa17.41■□□□□ 0.38
C2orf88-201ENST00000340623 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
C2orf88-201ENST00000340623 FHOD3Q2V2M9 1422 aa17.4■□□□□ 0.38
C2orf88-201ENST00000340623 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.38
C2orf88-201ENST00000340623 KCNH8Q96L42 1107 aa17.38■□□□□ 0.37
C2orf88-201ENST00000340623 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
C2orf88-201ENST00000340623 VPS8Q8N3P4 1428 aa17.36■□□□□ 0.37
C2orf88-201ENST00000340623 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
C2orf88-201ENST00000340623 CARMIL2Q6F5E8 1435 aa17.36■□□□□ 0.37
C2orf88-201ENST00000340623 PLEKHD1A6NEE1 506 aa17.35■□□□□ 0.37
C2orf88-201ENST00000340623 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
C2orf88-201ENST00000340623 KIF21BO75037 1637 aa17.3■□□□□ 0.36
C2orf88-201ENST00000340623 ZEB1P37275 1124 aaPredicted RBP17.29■□□□□ 0.36
C2orf88-201ENST00000340623 KANK4Q5T7N3 995 aaPredicted RBP17.28■□□□□ 0.36
C2orf88-201ENST00000340623 TRIM52Q96A61 297 aa17.28■□□□□ 0.36
C2orf88-201ENST00000340623 ERICH3Q5RHP9 1530 aa17.28■□□□□ 0.36
C2orf88-201ENST00000340623 FMN1Q68DA7 1419 aa17.27■□□□□ 0.35
C2orf88-201ENST00000340623 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
C2orf88-201ENST00000340623 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
C2orf88-201ENST00000340623 WDR62O43379 1518 aa17.21■□□□□ 0.35
C2orf88-201ENST00000340623 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
C2orf88-201ENST00000340623 PTPRGP23470 1445 aa17.18■□□□□ 0.34
C2orf88-201ENST00000340623 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
C2orf88-201ENST00000340623 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
C2orf88-201ENST00000340623 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
C2orf88-201ENST00000340623 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
C2orf88-201ENST00000340623 CYB5RLQ6IPT4 315 aa17.14■□□□□ 0.33
C2orf88-201ENST00000340623 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
C2orf88-201ENST00000340623 GRIN2AQ12879 1464 aa17.13■□□□□ 0.33
C2orf88-201ENST00000340623 CUL7Q14999 1698 aa17.12■□□□□ 0.33
C2orf88-201ENST00000340623 PRG4Q92954 1404 aaPredicted RBP17.12■□□□□ 0.33
C2orf88-201ENST00000340623 TSPY4P0CV99 314 aa17.11■□□□□ 0.33
C2orf88-201ENST00000340623 TSPY10P0CW01 314 aa17.11■□□□□ 0.33
C2orf88-201ENST00000340623 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
C2orf88-201ENST00000340623 RRP7BPQ9NSQ0 103 aa17.09■□□□□ 0.33
C2orf88-201ENST00000340623 CCNB3Q8WWL7 1395 aa17.09■□□□□ 0.33
C2orf88-201ENST00000340623 KIAA0586Q9BVV6 1533 aa17.08■□□□□ 0.33
C2orf88-201ENST00000340623 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
C2orf88-201ENST00000340623 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
C2orf88-201ENST00000340623 IQGAP2Q13576 1575 aa17.03■□□□□ 0.32
C2orf88-201ENST00000340623 TARBP1Q13395 1621 aaKnown RBP17.01■□□□□ 0.31
C2orf88-201ENST00000340623 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
C2orf88-201ENST00000340623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.99■□□□□ 0.31
C2orf88-201ENST00000340623 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
C2orf88-201ENST00000340623 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
C2orf88-201ENST00000340623 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
C2orf88-201ENST00000340623 ADAMTS12P58397 1594 aa16.97■□□□□ 0.31
C2orf88-201ENST00000340623 CASKIN1Q8WXD9 1431 aa16.96■□□□□ 0.31
C2orf88-201ENST00000340623 MYT1Q01538 1121 aa16.96■□□□□ 0.31
C2orf88-201ENST00000340623 CCDC18Q5T9S5 1454 aa16.94■□□□□ 0.3
C2orf88-201ENST00000340623 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
C2orf88-201ENST00000340623 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
C2orf88-201ENST00000340623 EFCAB2Q5VUJ9 269 aa16.89■□□□□ 0.29
C2orf88-201ENST00000340623 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
C2orf88-201ENST00000340623 PLB1Q6P1J6 1458 aa16.87■□□□□ 0.29
C2orf88-201ENST00000340623 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
C2orf88-201ENST00000340623 HNRNPMP52272 730 aaKnown RBP eCLIP16.86■□□□□ 0.29
C2orf88-201ENST00000340623 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
C2orf88-201ENST00000340623 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.29
C2orf88-201ENST00000340623 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.28
C2orf88-201ENST00000340623 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
C2orf88-201ENST00000340623 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.28
C2orf88-201ENST00000340623 CDK13Q14004 1512 aaKnown RBP16.82■□□□□ 0.28
C2orf88-201ENST00000340623 ZNF644Q9H582 1327 aaPredicted RBP16.81■□□□□ 0.28
C2orf88-201ENST00000340623 UACAQ9BZF9 1416 aa16.81■□□□□ 0.28
C2orf88-201ENST00000340623 PCF11O94913 1555 aaKnown RBP16.81■□□□□ 0.28
C2orf88-201ENST00000340623 NUP160Q12769 1436 aa16.8■□□□□ 0.28
C2orf88-201ENST00000340623 CTTNBP2Q8WZ74 1663 aa16.78■□□□□ 0.28
C2orf88-201ENST00000340623 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
C2orf88-201ENST00000340623 EPRSP07814 1512 aaKnown RBP16.78■□□□□ 0.28
C2orf88-201ENST00000340623 NCOA2Q15596 1464 aa16.77■□□□□ 0.28
C2orf88-201ENST00000340623 WDR97A6NE52 1622 aa16.77■□□□□ 0.28
C2orf88-201ENST00000340623 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.27
C2orf88-201ENST00000340623 CENPBP07199 599 aaPredicted RBP16.76■□□□□ 0.27
C2orf88-201ENST00000340623 HECW1Q76N89 1606 aa16.76■□□□□ 0.27
C2orf88-201ENST00000340623 FAM69CQ0P6D2 419 aa16.76■□□□□ 0.27
C2orf88-201ENST00000340623 TIAM1Q13009 1591 aa16.76■□□□□ 0.27
C2orf88-201ENST00000340623 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
C2orf88-201ENST00000340623 ARID4BQ4LE39 1312 aaPredicted RBP16.73■□□□□ 0.27
C2orf88-201ENST00000340623 UGGT2Q9NYU1 1516 aa16.73■□□□□ 0.27
C2orf88-201ENST00000340623 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
C2orf88-201ENST00000340623 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
C2orf88-201ENST00000340623 FGD6Q6ZV73 1430 aa16.73■□□□□ 0.27
C2orf88-201ENST00000340623 TROQ12816 1431 aaPredicted RBP16.73■□□□□ 0.27
C2orf88-201ENST00000340623 SETD5Q9C0A6 1442 aa16.72■□□□□ 0.27
C2orf88-201ENST00000340623 RAB3GAP2Q9H2M9 1393 aa16.7■□□□□ 0.26
C2orf88-201ENST00000340623 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
C2orf88-201ENST00000340623 KIAA0556O60303 1618 aa16.69■□□□□ 0.26
C2orf88-201ENST00000340623 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
C2orf88-201ENST00000340623 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
C2orf88-201ENST00000340623 MLECQ14165 292 aa16.68■□□□□ 0.26
C2orf88-201ENST00000340623 ANKRD30AQ9BXX3 1397 aa16.68■□□□□ 0.26
C2orf88-201ENST00000340623 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
C2orf88-201ENST00000340623 EHBP1L1Q8N3D4 1523 aa16.67■□□□□ 0.26
C2orf88-201ENST00000340623 GGT6Q6P531 493 aa16.66■□□□□ 0.26
C2orf88-201ENST00000340623 STAG3Q9UJ98 1225 aa16.66■□□□□ 0.26
C2orf88-201ENST00000340623 RSPH4AQ5TD94 716 aa16.65■□□□□ 0.26
C2orf88-201ENST00000340623 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms