RNA–Protein interactions for RNA: ENST00000339252.7

HAVCR1-201, Transcript of hepatitis A virus cellular receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HAVCR1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HAVCR1-201ENST00000339252 NUP160Q12769 1436 aa16.94■□□□□ 0.3
HAVCR1-201ENST00000339252 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
HAVCR1-201ENST00000339252 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
HAVCR1-201ENST00000339252 RIMBP3CA6NJZ7 1639 aa16.9■□□□□ 0.3
HAVCR1-201ENST00000339252 RIMBP3BA6NNM3 1639 aa16.9■□□□□ 0.3
HAVCR1-201ENST00000339252 RIMBP3Q9UFD9 1639 aa16.9■□□□□ 0.3
HAVCR1-201ENST00000339252 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
HAVCR1-201ENST00000339252 RAPGEF2Q9Y4G8 1499 aa16.89■□□□□ 0.29
HAVCR1-201ENST00000339252 PCGF6Q9BYE7 350 aa16.88■□□□□ 0.29
HAVCR1-201ENST00000339252 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
HAVCR1-201ENST00000339252 PRXQ9BXM0 1461 aa16.83■□□□□ 0.28
HAVCR1-201ENST00000339252 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
HAVCR1-201ENST00000339252 KIAA0586Q9BVV6 1533 aa16.81■□□□□ 0.28
HAVCR1-201ENST00000339252 IQGAP2Q13576 1575 aa16.78■□□□□ 0.28
HAVCR1-201ENST00000339252 CTTNBP2Q8WZ74 1663 aa16.78■□□□□ 0.28
HAVCR1-201ENST00000339252 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.28
HAVCR1-201ENST00000339252 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
HAVCR1-201ENST00000339252 JPH4Q96JJ6 628 aa16.76■□□□□ 0.27
HAVCR1-201ENST00000339252 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
HAVCR1-201ENST00000339252 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
HAVCR1-201ENST00000339252 CLIP1P30622 1438 aa16.7■□□□□ 0.26
HAVCR1-201ENST00000339252 CARMIL2Q6F5E8 1435 aa16.66■□□□□ 0.26
HAVCR1-201ENST00000339252 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
HAVCR1-201ENST00000339252 HRCP23327 699 aa16.63■□□□□ 0.25
HAVCR1-201ENST00000339252 TTBK1Q5TCY1 1321 aaPredicted RBP16.63■□□□□ 0.25
HAVCR1-201ENST00000339252 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
HAVCR1-201ENST00000339252 DISP1Q96F81 1524 aa16.62■□□□□ 0.25
HAVCR1-201ENST00000339252 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
HAVCR1-201ENST00000339252 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
HAVCR1-201ENST00000339252 PTPRGP23470 1445 aa16.56■□□□□ 0.24
HAVCR1-201ENST00000339252 SAMD9Q5K651 1589 aa16.53■□□□□ 0.24
HAVCR1-201ENST00000339252 APLP2Q06481 763 aa16.52■□□□□ 0.24
HAVCR1-201ENST00000339252 P3H3Q8IVL6 736 aa16.52■□□□□ 0.23
HAVCR1-201ENST00000339252 ADCY10Q96PN6 1610 aa16.51■□□□□ 0.23
HAVCR1-201ENST00000339252 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
HAVCR1-201ENST00000339252 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
HAVCR1-201ENST00000339252 FHOD3Q2V2M9 1422 aa16.46■□□□□ 0.23
HAVCR1-201ENST00000339252 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
HAVCR1-201ENST00000339252 UACAQ9BZF9 1416 aa16.45■□□□□ 0.22
HAVCR1-201ENST00000339252 ABCC2Q92887 1545 aa16.44■□□□□ 0.22
HAVCR1-201ENST00000339252 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
HAVCR1-201ENST00000339252 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
HAVCR1-201ENST00000339252 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
HAVCR1-201ENST00000339252 UHRF1BP1LA0JNW5 1464 aa16.41■□□□□ 0.22
HAVCR1-201ENST00000339252 ABCA8O94911 1581 aa16.4■□□□□ 0.22
HAVCR1-201ENST00000339252 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
HAVCR1-201ENST00000339252 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
HAVCR1-201ENST00000339252 ZCCHC11Q5TAX3 1644 aaKnown RBP16.36■□□□□ 0.21
HAVCR1-201ENST00000339252 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
HAVCR1-201ENST00000339252 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
HAVCR1-201ENST00000339252 KDM5BQ9UGL1 1544 aa16.34■□□□□ 0.21
HAVCR1-201ENST00000339252 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
HAVCR1-201ENST00000339252 MAP3K1Q13233 1512 aa16.32■□□□□ 0.2
HAVCR1-201ENST00000339252 ASXL2Q76L83 1435 aa16.3■□□□□ 0.2
HAVCR1-201ENST00000339252 NUP153P49790 1475 aaKnown RBP16.29■□□□□ 0.2
HAVCR1-201ENST00000339252 ATP1B4Q9UN42 357 aaPredicted RBP16.28■□□□□ 0.2
HAVCR1-201ENST00000339252 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
HAVCR1-201ENST00000339252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
HAVCR1-201ENST00000339252 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
HAVCR1-201ENST00000339252 DIP2BQ9P265 1576 aa16.27■□□□□ 0.19
HAVCR1-201ENST00000339252 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
HAVCR1-201ENST00000339252 ABCC10Q5T3U5 1492 aa16.26■□□□□ 0.19
HAVCR1-201ENST00000339252 PCF11O94913 1555 aaKnown RBP16.25■□□□□ 0.19
HAVCR1-201ENST00000339252 ATP10BO94823 1461 aa16.25■□□□□ 0.19
HAVCR1-201ENST00000339252 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
HAVCR1-201ENST00000339252 FAM69CQ0P6D2 419 aa16.24■□□□□ 0.19
HAVCR1-201ENST00000339252 CDK13Q14004 1512 aaKnown RBP16.22■□□□□ 0.19
HAVCR1-201ENST00000339252 FYCO1Q9BQS8 1478 aa16.2■□□□□ 0.18
HAVCR1-201ENST00000339252 CASKIN1Q8WXD9 1431 aa16.2■□□□□ 0.18
HAVCR1-201ENST00000339252 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
HAVCR1-201ENST00000339252 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
HAVCR1-201ENST00000339252 TIAM1Q13009 1591 aa16.19■□□□□ 0.18
HAVCR1-201ENST00000339252 KCNH8Q96L42 1107 aa16.18■□□□□ 0.18
HAVCR1-201ENST00000339252 LRRIQ1Q96JM4 1722 aa16.17■□□□□ 0.18
HAVCR1-201ENST00000339252 TSPOAP1O95153 1857 aa16.16■□□□□ 0.18
HAVCR1-201ENST00000339252 CCER1Q8TC90 406 aaPredicted RBP16.16■□□□□ 0.18
HAVCR1-201ENST00000339252 GLI2P10070 1586 aa16.16■□□□□ 0.18
HAVCR1-201ENST00000339252 CCDC18Q5T9S5 1454 aa16.15■□□□□ 0.18
HAVCR1-201ENST00000339252 RRBP1Q9P2E9 1410 aaKnown RBP16.15■□□□□ 0.18
HAVCR1-201ENST00000339252 LRRC9Q6ZRR7 1453 aa16.14■□□□□ 0.17
HAVCR1-201ENST00000339252 PLEKHD1A6NEE1 506 aa16.13■□□□□ 0.17
HAVCR1-201ENST00000339252 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
HAVCR1-201ENST00000339252 CFAP43Q8NDM7 1665 aa16.12■□□□□ 0.17
HAVCR1-201ENST00000339252 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
HAVCR1-201ENST00000339252 CCNB3Q8WWL7 1395 aa16.08■□□□□ 0.16
HAVCR1-201ENST00000339252 ABCA9Q8IUA7 1624 aa16.08■□□□□ 0.16
HAVCR1-201ENST00000339252 PPRC1Q5VV67 1664 aaKnown RBP16.07■□□□□ 0.16
HAVCR1-201ENST00000339252 CD109Q6YHK3 1445 aa16.06■□□□□ 0.16
HAVCR1-201ENST00000339252 KIF14Q15058 1648 aa16.06■□□□□ 0.16
HAVCR1-201ENST00000339252 TROQ12816 1431 aaPredicted RBP16.05■□□□□ 0.16
HAVCR1-201ENST00000339252 TEX14Q8IWB6 1497 aa16.05■□□□□ 0.16
HAVCR1-201ENST00000339252 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
HAVCR1-201ENST00000339252 MAGI3Q5TCQ9 1506 aa16.03■□□□□ 0.16
HAVCR1-201ENST00000339252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
HAVCR1-201ENST00000339252 KDM6BO15054 1643 aa16.01■□□□□ 0.15
HAVCR1-201ENST00000339252 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
HAVCR1-201ENST00000339252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.99■□□□□ 0.15
HAVCR1-201ENST00000339252 MYO5CQ9NQX4 1742 aa15.98■□□□□ 0.15
HAVCR1-201ENST00000339252 EHBP1L1Q8N3D4 1523 aa15.98■□□□□ 0.15
HAVCR1-201ENST00000339252 CLSPNQ9HAW4 1339 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms