RNA–Protein interactions for RNA: ENST00000338525.6

TREX2-203, Transcript of three prime repair exonuclease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TREX2, Length 2,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2-203ENST00000338525 GRIN2AQ12879 1464 aa30.59■■■□□ 2.49
TREX2-203ENST00000338525 CTTNBP2Q8WZ74 1663 aa30.52■■■□□ 2.48
TREX2-203ENST00000338525 ARHGAP35Q9NRY4 1499 aa30.44■■■□□ 2.46
TREX2-203ENST00000338525 P3H3Q8IVL6 736 aa30.41■■■□□ 2.46
TREX2-203ENST00000338525 KIAA0586Q9BVV6 1533 aa30.4■■■□□ 2.46
TREX2-203ENST00000338525 CEP170Q5SW79 1584 aa30.39■■■□□ 2.45
TREX2-203ENST00000338525 IQGAP2Q13576 1575 aa30.38■■■□□ 2.45
TREX2-203ENST00000338525 NUP160Q12769 1436 aa30.38■■■□□ 2.45
TREX2-203ENST00000338525 ARAP1Q96P48 1450 aa30.37■■■□□ 2.45
TREX2-203ENST00000338525 CHD1O14646 1710 aa30.34■■■□□ 2.45
TREX2-203ENST00000338525 VPS8Q8N3P4 1428 aa30.32■■■□□ 2.44
TREX2-203ENST00000338525 EFCAB5A4FU69 1503 aa30.3■■■□□ 2.44
TREX2-203ENST00000338525 FHOD3Q2V2M9 1422 aa30.26■■■□□ 2.43
TREX2-203ENST00000338525 JPH4Q96JJ6 628 aa30.24■■■□□ 2.43
TREX2-203ENST00000338525 UGGT2Q9NYU1 1516 aa30.23■■■□□ 2.43
TREX2-203ENST00000338525 SAMD9Q5K651 1589 aa30.22■■■□□ 2.43
TREX2-203ENST00000338525 PPARGC1BQ86YN6 1023 aaKnown RBP30.17■■■□□ 2.42
TREX2-203ENST00000338525 APLP2Q06481 763 aa30.13■■■□□ 2.41
TREX2-203ENST00000338525 DISP1Q96F81 1524 aa30.12■■■□□ 2.41
TREX2-203ENST00000338525 FMN1Q68DA7 1419 aa30.08■■■□□ 2.41
TREX2-203ENST00000338525 TTBK1Q5TCY1 1321 aaPredicted RBP30.08■■■□□ 2.41
TREX2-203ENST00000338525 ATP1B4Q9UN42 357 aaPredicted RBP30.07■■■□□ 2.4
TREX2-203ENST00000338525 KIAA0556O60303 1618 aa30.06■■■□□ 2.4
TREX2-203ENST00000338525 CARMIL2Q6F5E8 1435 aa30.06■■■□□ 2.4
TREX2-203ENST00000338525 PRG4Q92954 1404 aaPredicted RBP30.03■■■□□ 2.4
TREX2-203ENST00000338525 OSCARQ8IYS5 282 aa30.03■■■□□ 2.4
TREX2-203ENST00000338525 CLASP1Q7Z460 1538 aa30.01■■■□□ 2.39
TREX2-203ENST00000338525 CASKIN1Q8WXD9 1431 aa29.98■■■□□ 2.39
TREX2-203ENST00000338525 PCF11O94913 1555 aaKnown RBP29.97■■■□□ 2.39
TREX2-203ENST00000338525 SHROOM2Q13796 1616 aa29.95■■■□□ 2.38
TREX2-203ENST00000338525 FYCO1Q9BQS8 1478 aa29.93■■■□□ 2.38
TREX2-203ENST00000338525 KANK4Q5T7N3 995 aaPredicted RBP29.87■■■□□ 2.37
TREX2-203ENST00000338525 ERCC6L2Q5T890 1561 aa29.83■■■□□ 2.37
TREX2-203ENST00000338525 PTPRGP23470 1445 aa29.83■■■□□ 2.37
TREX2-203ENST00000338525 TRIM26Q12899 539 aaPredicted RBP29.81■■■□□ 2.36
TREX2-203ENST00000338525 MAP3K1Q13233 1512 aa29.8■■■□□ 2.36
TREX2-203ENST00000338525 TIAM1Q13009 1591 aa29.79■■■□□ 2.36
TREX2-203ENST00000338525 ARID3CA6NKF2 412 aa29.78■■■□□ 2.36
TREX2-203ENST00000338525 PLB1Q6P1J6 1458 aa29.78■■■□□ 2.36
TREX2-203ENST00000338525 PCGF6Q9BYE7 350 aa29.76■■■□□ 2.35
TREX2-203ENST00000338525 HECW1Q76N89 1606 aa29.75■■■□□ 2.35
TREX2-203ENST00000338525 RAPGEF6Q8TEU7 1601 aa29.74■■■□□ 2.35
TREX2-203ENST00000338525 LRRC9Q6ZRR7 1453 aa29.7■■■□□ 2.34
TREX2-203ENST00000338525 EPRSP07814 1512 aaKnown RBP29.7■■■□□ 2.34
TREX2-203ENST00000338525 CFAP43Q8NDM7 1665 aa29.7■■■□□ 2.34
TREX2-203ENST00000338525 NUP153P49790 1475 aaKnown RBP29.69■■■□□ 2.34
TREX2-203ENST00000338525 LRRIQ1Q96JM4 1722 aa29.69■■■□□ 2.34
TREX2-203ENST00000338525 CCDC18Q5T9S5 1454 aa29.69■■■□□ 2.34
TREX2-203ENST00000338525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.67■■■□□ 2.34
TREX2-203ENST00000338525 HNRNPUL2Q1KMD3 747 aaKnown RBP29.67■■■□□ 2.34
TREX2-203ENST00000338525 ABCA8O94911 1581 aa29.66■■■□□ 2.34
TREX2-203ENST00000338525 CDK13Q14004 1512 aaKnown RBP29.65■■■□□ 2.34
TREX2-203ENST00000338525 MTUS2Q5JR59 1369 aa29.63■■■□□ 2.33
TREX2-203ENST00000338525 UACAQ9BZF9 1416 aa29.62■■■□□ 2.33
TREX2-203ENST00000338525 CDK11AQ9UQ88 783 aaPredicted RBP29.55■■■□□ 2.32
TREX2-203ENST00000338525 ATP10BO94823 1461 aa29.52■■■□□ 2.32
TREX2-203ENST00000338525 MAGI3Q5TCQ9 1506 aa29.52■■■□□ 2.32
TREX2-203ENST00000338525 ABCC2Q92887 1545 aa29.49■■■□□ 2.31
TREX2-203ENST00000338525 EHBP1L1Q8N3D4 1523 aa29.48■■■□□ 2.31
TREX2-203ENST00000338525 PHLDB1Q86UU1 1377 aa29.44■■■□□ 2.3
TREX2-203ENST00000338525 PLEKHD1A6NEE1 506 aa29.44■■■□□ 2.3
TREX2-203ENST00000338525 ARHGEF11O15085 1522 aa29.44■■■□□ 2.3
TREX2-203ENST00000338525 UHRF1BP1LA0JNW5 1464 aa29.43■■■□□ 2.3
TREX2-203ENST00000338525 NCOA2Q15596 1464 aa29.4■■■□□ 2.3
TREX2-203ENST00000338525 TROQ12816 1431 aaPredicted RBP29.38■■■□□ 2.29
TREX2-203ENST00000338525 SUPT6HQ7KZ85 1726 aaKnown RBP29.38■■■□□ 2.29
TREX2-203ENST00000338525 RRBP1Q9P2E9 1410 aaKnown RBP29.34■■■□□ 2.29
TREX2-203ENST00000338525 ADCY10Q96PN6 1610 aa29.33■■■□□ 2.29
TREX2-203ENST00000338525 CCNB3Q8WWL7 1395 aa29.33■■■□□ 2.29
TREX2-203ENST00000338525 KDM5BQ9UGL1 1544 aa29.32■■■□□ 2.28
TREX2-203ENST00000338525 CYB5RLQ6IPT4 315 aa29.3■■■□□ 2.28
TREX2-203ENST00000338525 RIMBP3CA6NJZ7 1639 aa29.29■■■□□ 2.28
TREX2-203ENST00000338525 RIMBP3BA6NNM3 1639 aa29.29■■■□□ 2.28
TREX2-203ENST00000338525 RIMBP3Q9UFD9 1639 aa29.29■■■□□ 2.28
TREX2-203ENST00000338525 ZCCHC11Q5TAX3 1644 aaKnown RBP29.28■■■□□ 2.28
TREX2-203ENST00000338525 MYOM3Q5VTT5 1437 aa29.26■■■□□ 2.28
TREX2-203ENST00000338525 FAM50AQ14320 339 aaKnown RBP29.26■■■□□ 2.27
TREX2-203ENST00000338525 NPM1P06748 294 aaKnown RBP eCLIP29.24■■■□□ 2.27
TREX2-203ENST00000338525 FGD6Q6ZV73 1430 aa29.23■■■□□ 2.27
TREX2-203ENST00000338525 KIF14Q15058 1648 aa29.22■■■□□ 2.27
TREX2-203ENST00000338525 KCNH8Q96L42 1107 aa29.21■■■□□ 2.27
TREX2-203ENST00000338525 ITGAEP38570 1179 aa29.18■■■□□ 2.26
TREX2-203ENST00000338525 ABCC10Q5T3U5 1492 aa29.12■■■□□ 2.25
TREX2-203ENST00000338525 MIA2Q96PC5 1412 aa29.11■■■□□ 2.25
TREX2-203ENST00000338525 GPATCH8Q9UKJ3 1502 aaKnown RBP29.11■■■□□ 2.25
TREX2-203ENST00000338525 CFDP1Q9UEE9 299 aaPredicted RBP29.11■■■□□ 2.25
TREX2-203ENST00000338525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.1■■■□□ 2.25
TREX2-203ENST00000338525 ASXL2Q76L83 1435 aa29.09■■■□□ 2.25
TREX2-203ENST00000338525 WDR7Q9Y4E6 1490 aa29.08■■■□□ 2.25
TREX2-203ENST00000338525 PTPN23Q9H3S7 1636 aa29.07■■■□□ 2.24
TREX2-203ENST00000338525 ZNF777Q9ULD5 760 aaPredicted RBP29.05■■■□□ 2.24
TREX2-203ENST00000338525 ZNF644Q9H582 1327 aaPredicted RBP29.04■■■□□ 2.24
TREX2-203ENST00000338525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.03■■■□□ 2.24
TREX2-203ENST00000338525 TCOF1Q13428 1488 aaKnown RBP29.02■■■□□ 2.24
TREX2-203ENST00000338525 ITSN2Q9NZM3 1697 aa29.01■■■□□ 2.23
TREX2-203ENST00000338525 TTC37Q6PGP7 1564 aa28.99■■■□□ 2.23
TREX2-203ENST00000338525 CDC42BPAQ5VT25 1732 aa28.98■■■□□ 2.23
TREX2-203ENST00000338525 CAMSAP2Q08AD1 1489 aa28.92■■■□□ 2.22
TREX2-203ENST00000338525 PTPRKQ15262 1439 aa28.89■■■□□ 2.22
TREX2-203ENST00000338525 PREX2Q70Z35 1606 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms