RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
UBA1-201ENST00000335972 PHLDB1Q86UU1 1377 aa21.72■■□□□ 1.07
UBA1-201ENST00000335972 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
UBA1-201ENST00000335972 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
UBA1-201ENST00000335972 RAB3GAP2Q9H2M9 1393 aa21.7■■□□□ 1.06
UBA1-201ENST00000335972 TIAM1Q13009 1591 aa21.67■■□□□ 1.06
UBA1-201ENST00000335972 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
UBA1-201ENST00000335972 LRRC9Q6ZRR7 1453 aa21.65■■□□□ 1.06
UBA1-201ENST00000335972 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
UBA1-201ENST00000335972 PCF11O94913 1555 aaKnown RBP21.61■■□□□ 1.05
UBA1-201ENST00000335972 CLSPNQ9HAW4 1339 aa21.6■■□□□ 1.05
UBA1-201ENST00000335972 ABCA10Q8WWZ4 1543 aa21.59■■□□□ 1.05
UBA1-201ENST00000335972 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
UBA1-201ENST00000335972 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
UBA1-201ENST00000335972 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
UBA1-201ENST00000335972 HIRIP3Q9BW71 556 aaPredicted RBP21.55■■□□□ 1.04
UBA1-201ENST00000335972 SETD5Q9C0A6 1442 aa21.53■■□□□ 1.04
UBA1-201ENST00000335972 MAPKBP1O60336 1514 aa21.47■■□□□ 1.03
UBA1-201ENST00000335972 KCNH8Q96L42 1107 aa21.45■■□□□ 1.02
UBA1-201ENST00000335972 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
UBA1-201ENST00000335972 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
UBA1-201ENST00000335972 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
UBA1-201ENST00000335972 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
UBA1-201ENST00000335972 CASKIN1Q8WXD9 1431 aa21.42■■□□□ 1.02
UBA1-201ENST00000335972 PDS5BQ9NTI5 1447 aa21.4■■□□□ 1.02
UBA1-201ENST00000335972 FYCO1Q9BQS8 1478 aa21.4■■□□□ 1.02
UBA1-201ENST00000335972 CFAP43Q8NDM7 1665 aa21.39■■□□□ 1.01
UBA1-201ENST00000335972 DDX10Q13206 875 aaKnown RBP21.39■■□□□ 1.01
UBA1-201ENST00000335972 LAMC3Q9Y6N6 1575 aa21.38■■□□□ 1.01
UBA1-201ENST00000335972 CHIC2Q9UKJ5 165 aa21.38■■□□□ 1.01
UBA1-201ENST00000335972 CUL7Q14999 1698 aa21.37■■□□□ 1.01
UBA1-201ENST00000335972 AQRO60306 1485 aaKnown RBP eCLIP21.36■■□□□ 1.014e-7■■■■□ 24
UBA1-201ENST00000335972 FMN1Q68DA7 1419 aa21.36■■□□□ 1.01
UBA1-201ENST00000335972 CTTNBP2Q8WZ74 1663 aa21.35■■□□□ 1.01
UBA1-201ENST00000335972 EFCAB5A4FU69 1503 aa21.35■■□□□ 1.01
UBA1-201ENST00000335972 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
UBA1-201ENST00000335972 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
UBA1-201ENST00000335972 FGD6Q6ZV73 1430 aa21.33■■□□□ 1
UBA1-201ENST00000335972 RRP7BPQ9NSQ0 103 aa21.32■■□□□ 1
UBA1-201ENST00000335972 PTPRKQ15262 1439 aa21.32■■□□□ 1
UBA1-201ENST00000335972 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
UBA1-201ENST00000335972 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
UBA1-201ENST00000335972 NCOA2Q15596 1464 aa21.25■□□□□ 0.99
UBA1-201ENST00000335972 LRRIQ1Q96JM4 1722 aa21.23■□□□□ 0.99
UBA1-201ENST00000335972 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
UBA1-201ENST00000335972 CCDC18Q5T9S5 1454 aa21.21■□□□□ 0.99
UBA1-201ENST00000335972 TRIM52Q96A61 297 aa21.21■□□□□ 0.99
UBA1-201ENST00000335972 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
UBA1-201ENST00000335972 SAMD9Q5K651 1589 aa21.18■□□□□ 0.98
UBA1-201ENST00000335972 TONSLQ96HA7 1378 aa21.18■□□□□ 0.98
UBA1-201ENST00000335972 MAGI3Q5TCQ9 1506 aa21.17■□□□□ 0.98
UBA1-201ENST00000335972 MYOM3Q5VTT5 1437 aa21.17■□□□□ 0.98
UBA1-201ENST00000335972 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
UBA1-201ENST00000335972 ZNF608Q9ULD9 1512 aaPredicted RBP21.16■□□□□ 0.98
UBA1-201ENST00000335972 FOXD1Q16676 465 aa21.16■□□□□ 0.98
UBA1-201ENST00000335972 FBLN2P98095 1184 aa21.14■□□□□ 0.98
UBA1-201ENST00000335972 CDK13Q14004 1512 aaKnown RBP21.14■□□□□ 0.97
UBA1-201ENST00000335972 NAIPQ13075 1403 aa21.12■□□□□ 0.97
UBA1-201ENST00000335972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.11■□□□□ 0.972e-8■■□□□ 13.2
UBA1-201ENST00000335972 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
UBA1-201ENST00000335972 SUPT16HQ9Y5B9 1047 aaKnown RBP21.08■□□□□ 0.97
UBA1-201ENST00000335972 PTPN23Q9H3S7 1636 aa21.08■□□□□ 0.97
UBA1-201ENST00000335972 ZNF644Q9H582 1327 aaPredicted RBP21.08■□□□□ 0.96
UBA1-201ENST00000335972 BCANQ96GW7 911 aa21.06■□□□□ 0.96
UBA1-201ENST00000335972 SUPT6HQ7KZ85 1726 aaKnown RBP21.06■□□□□ 0.96
UBA1-201ENST00000335972 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
UBA1-201ENST00000335972 MRC2Q9UBG0 1479 aa21.06■□□□□ 0.96
UBA1-201ENST00000335972 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
UBA1-201ENST00000335972 EHBP1L1Q8N3D4 1523 aa21.05■□□□□ 0.96
UBA1-201ENST00000335972 IQGAP2Q13576 1575 aa21.04■□□□□ 0.96
UBA1-201ENST00000335972 EPRSP07814 1512 aaKnown RBP21.04■□□□□ 0.96
UBA1-201ENST00000335972 UGGT2Q9NYU1 1516 aa21.02■□□□□ 0.96
UBA1-201ENST00000335972 TIMELESSQ9UNS1 1208 aa21.02■□□□□ 0.96
UBA1-201ENST00000335972 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
UBA1-201ENST00000335972 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
UBA1-201ENST00000335972 ANP32CO43423 234 aa20.99■□□□□ 0.95
UBA1-201ENST00000335972 ZNF777Q9ULD5 760 aaPredicted RBP20.99■□□□□ 0.95
UBA1-201ENST00000335972 KDM6BO15054 1643 aa20.98■□□□□ 0.95
UBA1-201ENST00000335972 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
UBA1-201ENST00000335972 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
UBA1-201ENST00000335972 HECW1Q76N89 1606 aa20.95■□□□□ 0.94
UBA1-201ENST00000335972 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
UBA1-201ENST00000335972 ARHGEF11O15085 1522 aa20.91■□□□□ 0.94
UBA1-201ENST00000335972 HSPA5P11021 654 aaKnown RBP20.91■□□□□ 0.94
UBA1-201ENST00000335972 WDR62O43379 1518 aa20.91■□□□□ 0.94
UBA1-201ENST00000335972 L3MBTL2Q969R5 705 aa20.9■□□□□ 0.94
UBA1-201ENST00000335972 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
UBA1-201ENST00000335972 DENND4BO75064 1496 aaPredicted RBP20.89■□□□□ 0.94
UBA1-201ENST00000335972 IFT140Q96RY7 1462 aa20.89■□□□□ 0.93
UBA1-201ENST00000335972 FKBP8Q14318 412 aa20.89■□□□□ 0.93
UBA1-201ENST00000335972 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
UBA1-201ENST00000335972 PRG4Q92954 1404 aaPredicted RBP20.87■□□□□ 0.93
UBA1-201ENST00000335972 SLC4A1APQ9BWU0 796 aaKnown RBP20.85■□□□□ 0.93
UBA1-201ENST00000335972 TCOF1Q13428 1488 aaKnown RBP20.85■□□□□ 0.93
UBA1-201ENST00000335972 NUP153P49790 1475 aaKnown RBP20.85■□□□□ 0.93
UBA1-201ENST00000335972 KIAA0586Q9BVV6 1533 aa20.84■□□□□ 0.93
UBA1-201ENST00000335972 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.93
UBA1-201ENST00000335972 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
UBA1-201ENST00000335972 PLB1Q6P1J6 1458 aa20.83■□□□□ 0.92
UBA1-201ENST00000335972 KDM5BQ9UGL1 1544 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms