RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 TSHZ2Q9NRE2 1034 aa29.96■■■□□ 2.39
SPNS1-203ENST00000334536 DHX57Q6P158 1386 aaKnown RBP29.95■■■□□ 2.38
SPNS1-203ENST00000334536 CCNB3Q8WWL7 1395 aa29.91■■■□□ 2.38
SPNS1-203ENST00000334536 DNMBPQ6XZF7 1577 aa29.9■■■□□ 2.38
SPNS1-203ENST00000334536 SUPT16HQ9Y5B9 1047 aaKnown RBP29.89■■■□□ 2.38
SPNS1-203ENST00000334536 TIAM1Q13009 1591 aa29.86■■■□□ 2.37
SPNS1-203ENST00000334536 MIER1Q8N108 512 aa29.84■■■□□ 2.37
SPNS1-203ENST00000334536 ABCA10Q8WWZ4 1543 aa29.83■■■□□ 2.37
SPNS1-203ENST00000334536 FHAD1B1AJZ9 1412 aa29.81■■■□□ 2.36
SPNS1-203ENST00000334536 TOPBP1Q92547 1522 aa29.77■■■□□ 2.36
SPNS1-203ENST00000334536 PDS5BQ9NTI5 1447 aa29.77■■■□□ 2.36
SPNS1-203ENST00000334536 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
SPNS1-203ENST00000334536 LRRC9Q6ZRR7 1453 aa29.73■■■□□ 2.35
SPNS1-203ENST00000334536 KIF21AQ7Z4S6 1674 aa29.72■■■□□ 2.35
SPNS1-203ENST00000334536 CUL7Q14999 1698 aa29.71■■■□□ 2.35
SPNS1-203ENST00000334536 EFCAB5A4FU69 1503 aa29.68■■■□□ 2.34
SPNS1-203ENST00000334536 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
SPNS1-203ENST00000334536 CFAP43Q8NDM7 1665 aa29.68■■■□□ 2.34
SPNS1-203ENST00000334536 AQRO60306 1485 aaKnown RBP eCLIP29.62■■■□□ 2.33
SPNS1-203ENST00000334536 URB2Q14146 1524 aaKnown RBP29.62■■■□□ 2.33
SPNS1-203ENST00000334536 PCF11O94913 1555 aaKnown RBP29.61■■■□□ 2.33
SPNS1-203ENST00000334536 FYCO1Q9BQS8 1478 aa29.59■■■□□ 2.33
SPNS1-203ENST00000334536 CTTNBP2Q8WZ74 1663 aa29.56■■■□□ 2.32
SPNS1-203ENST00000334536 RAB3GAP2Q9H2M9 1393 aa29.55■■■□□ 2.32
SPNS1-203ENST00000334536 CASKIN1Q8WXD9 1431 aa29.55■■■□□ 2.32
SPNS1-203ENST00000334536 PHLDB1Q86UU1 1377 aa29.55■■■□□ 2.32
SPNS1-203ENST00000334536 WDR97A6NE52 1622 aa29.55■■■□□ 2.32
SPNS1-203ENST00000334536 SETD5Q9C0A6 1442 aa29.54■■■□□ 2.32
SPNS1-203ENST00000334536 ITGAEP38570 1179 aa29.5■■■□□ 2.31
SPNS1-203ENST00000334536 FHOD3Q2V2M9 1422 aa29.5■■■□□ 2.31
SPNS1-203ENST00000334536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.49■■■□□ 2.31
SPNS1-203ENST00000334536 FMN1Q68DA7 1419 aa29.46■■■□□ 2.31
SPNS1-203ENST00000334536 P3H3Q8IVL6 736 aa29.45■■■□□ 2.31
SPNS1-203ENST00000334536 ABCA5Q8WWZ7 1642 aa29.44■■■□□ 2.3
SPNS1-203ENST00000334536 MAPKBP1O60336 1514 aa29.44■■■□□ 2.3
SPNS1-203ENST00000334536 MRC2Q9UBG0 1479 aa29.41■■■□□ 2.3
SPNS1-203ENST00000334536 MYT1LQ9UL68 1186 aa29.4■■■□□ 2.3
SPNS1-203ENST00000334536 FAM50AQ14320 339 aaKnown RBP29.37■■■□□ 2.29
SPNS1-203ENST00000334536 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
SPNS1-203ENST00000334536 ATP1B4Q9UN42 357 aaPredicted RBP29.35■■■□□ 2.29
SPNS1-203ENST00000334536 ERCC6Q03468 1493 aa29.35■■■□□ 2.29
SPNS1-203ENST00000334536 SAMD9Q5K651 1589 aa29.34■■■□□ 2.29
SPNS1-203ENST00000334536 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
SPNS1-203ENST00000334536 TDRD9Q8NDG6 1382 aaKnown RBP29.29■■■□□ 2.28
SPNS1-203ENST00000334536 TIMELESSQ9UNS1 1208 aa29.29■■■□□ 2.28
SPNS1-203ENST00000334536 THOC2Q8NI27 1593 aaKnown RBP29.27■■■□□ 2.28
SPNS1-203ENST00000334536 WDR62O43379 1518 aa29.26■■■□□ 2.27
SPNS1-203ENST00000334536 FGD6Q6ZV73 1430 aa29.24■■■□□ 2.27
SPNS1-203ENST00000334536 TARBP1Q13395 1621 aaKnown RBP29.21■■■□□ 2.27
SPNS1-203ENST00000334536 GRIN2BQ13224 1484 aa29.2■■■□□ 2.27
SPNS1-203ENST00000334536 MTUS2Q5JR59 1369 aa29.2■■■□□ 2.26
SPNS1-203ENST00000334536 RBM19Q9Y4C8 960 aaKnown RBP29.16■■■□□ 2.26
SPNS1-203ENST00000334536 EHBP1L1Q8N3D4 1523 aa29.12■■■□□ 2.25
SPNS1-203ENST00000334536 LRRIQ1Q96JM4 1722 aa29.1■■■□□ 2.25
SPNS1-203ENST00000334536 MYOM3Q5VTT5 1437 aa29.09■■■□□ 2.25
SPNS1-203ENST00000334536 NCOA2Q15596 1464 aa29.09■■■□□ 2.25
SPNS1-203ENST00000334536 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
SPNS1-203ENST00000334536 HFM1A2PYH4 1435 aa29.07■■■□□ 2.24
SPNS1-203ENST00000334536 SIN3AQ96ST3 1273 aa29.07■■■□□ 2.24
SPNS1-203ENST00000334536 CCDC18Q5T9S5 1454 aa29.06■■■□□ 2.24
SPNS1-203ENST00000334536 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
SPNS1-203ENST00000334536 PBRM1Q86U86 1689 aa29.03■■■□□ 2.24
SPNS1-203ENST00000334536 FANCIQ9NVI1 1328 aa29.03■■■□□ 2.24
SPNS1-203ENST00000334536 ARHGEF11O15085 1522 aa29.02■■■□□ 2.24
SPNS1-203ENST00000334536 PTPN23Q9H3S7 1636 aa29■■■□□ 2.23
SPNS1-203ENST00000334536 UACAQ9BZF9 1416 aa29■■■□□ 2.23
SPNS1-203ENST00000334536 UGGT2Q9NYU1 1516 aa29■■■□□ 2.23
SPNS1-203ENST00000334536 PTPRKQ15262 1439 aa28.99■■■□□ 2.23
SPNS1-203ENST00000334536 PPP1R15AO75807 674 aaPredicted RBP28.99■■■□□ 2.23
SPNS1-203ENST00000334536 ADAMTS12P58397 1594 aa28.97■■■□□ 2.23
SPNS1-203ENST00000334536 HECW1Q76N89 1606 aa28.97■■■□□ 2.23
SPNS1-203ENST00000334536 IQGAP2Q13576 1575 aa28.97■■■□□ 2.23
SPNS1-203ENST00000334536 ZNF608Q9ULD9 1512 aaPredicted RBP28.95■■■□□ 2.22
SPNS1-203ENST00000334536 NAIPQ13075 1403 aa28.94■■■□□ 2.22
SPNS1-203ENST00000334536 TCOF1Q13428 1488 aaKnown RBP28.93■■■□□ 2.22
SPNS1-203ENST00000334536 ERICH6BQ5W0A0 696 aa28.92■■■□□ 2.22
SPNS1-203ENST00000334536 MAGI3Q5TCQ9 1506 aa28.89■■■□□ 2.22
SPNS1-203ENST00000334536 MSH5O43196 834 aa28.88■■■□□ 2.21
SPNS1-203ENST00000334536 TONSLQ96HA7 1378 aa28.86■■■□□ 2.21
SPNS1-203ENST00000334536 EPRSP07814 1512 aaKnown RBP28.85■■■□□ 2.21
SPNS1-203ENST00000334536 AKNAQ7Z591 1439 aa28.84■■■□□ 2.21
SPNS1-203ENST00000334536 EIF4G3O43432 1585 aaKnown RBP28.84■■■□□ 2.21
SPNS1-203ENST00000334536 MIA2Q96PC5 1412 aa28.82■■■□□ 2.2
SPNS1-203ENST00000334536 FKBP8Q14318 412 aa28.8■■■□□ 2.2
SPNS1-203ENST00000334536 NEFLP07196 543 aa28.79■■■□□ 2.2
SPNS1-203ENST00000334536 DDX10Q13206 875 aaKnown RBP28.79■■■□□ 2.2
SPNS1-203ENST00000334536 GCC2Q8IWJ2 1684 aa28.78■■■□□ 2.2
SPNS1-203ENST00000334536 KIAA0586Q9BVV6 1533 aa28.72■■■□□ 2.19
SPNS1-203ENST00000334536 DEKP35659 375 aaKnown RBP28.7■■■□□ 2.18
SPNS1-203ENST00000334536 BCANQ96GW7 911 aa28.7■■■□□ 2.18
SPNS1-203ENST00000334536 CDK13Q14004 1512 aaKnown RBP28.69■■■□□ 2.18
SPNS1-203ENST00000334536 CCER2I3L3R5 266 aa28.69■■■□□ 2.18
SPNS1-203ENST00000334536 KIAA0556O60303 1618 aa28.65■■■□□ 2.18
SPNS1-203ENST00000334536 KDM5BQ9UGL1 1544 aa28.64■■■□□ 2.18
SPNS1-203ENST00000334536 KCNH8Q96L42 1107 aa28.64■■■□□ 2.18
SPNS1-203ENST00000334536 RRP7BPQ9NSQ0 103 aa28.63■■■□□ 2.17
SPNS1-203ENST00000334536 DISP1Q96F81 1524 aa28.62■■■□□ 2.17
SPNS1-203ENST00000334536 ANP32CO43423 234 aa28.6■■■□□ 2.17
SPNS1-203ENST00000334536 ANO8Q9HCE9 1232 aaPredicted RBP28.6■■■□□ 2.17
SPNS1-203ENST00000334536 ROCK1Q13464 1354 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms