RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 FANCD2Q9BXW9 1451 aa15.6■□□□□ 0.09
POLR1B-202ENST00000333990 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
POLR1B-202ENST00000333990 NEFMP07197 916 aa15.55■□□□□ 0.08
POLR1B-202ENST00000333990 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
POLR1B-202ENST00000333990 RRP7BPQ9NSQ0 103 aa15.53■□□□□ 0.08
POLR1B-202ENST00000333990 CCNB3Q8WWL7 1395 aa15.52■□□□□ 0.07
POLR1B-202ENST00000333990 FMN1Q68DA7 1419 aa15.49■□□□□ 0.07
POLR1B-202ENST00000333990 RAPGEF2Q9Y4G8 1499 aa15.49■□□□□ 0.07
POLR1B-202ENST00000333990 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
POLR1B-202ENST00000333990 ARID4BQ4LE39 1312 aaPredicted RBP15.45■□□□□ 0.06
POLR1B-202ENST00000333990 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
POLR1B-202ENST00000333990 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
POLR1B-202ENST00000333990 PPP1R15AO75807 674 aaPredicted RBP15.4■□□□□ 0.06
POLR1B-202ENST00000333990 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
POLR1B-202ENST00000333990 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
POLR1B-202ENST00000333990 DAXXQ9UER7 740 aaPredicted RBP15.37■□□□□ 0.05
POLR1B-202ENST00000333990 FGD5Q6ZNL6 1462 aa15.35■□□□□ 0.05
POLR1B-202ENST00000333990 EFCAB2Q5VUJ9 269 aa15.35■□□□□ 0.05
POLR1B-202ENST00000333990 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
POLR1B-202ENST00000333990 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
POLR1B-202ENST00000333990 ARHGAP35Q9NRY4 1499 aa15.33■□□□□ 0.04
POLR1B-202ENST00000333990 CFTRP13569 1480 aa15.32■□□□□ 0.04
POLR1B-202ENST00000333990 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
POLR1B-202ENST00000333990 KANK1Q14678 1352 aa15.32■□□□□ 0.04
POLR1B-202ENST00000333990 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
POLR1B-202ENST00000333990 CLSPNQ9HAW4 1339 aa15.3■□□□□ 0.04
POLR1B-202ENST00000333990 SLC24A1O60721 1099 aa15.29■□□□□ 0.04
POLR1B-202ENST00000333990 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
POLR1B-202ENST00000333990 ZBTB47Q9UFB7 747 aaPredicted RBP15.27■□□□□ 0.04
POLR1B-202ENST00000333990 RSPH4AQ5TD94 716 aa15.26■□□□□ 0.03
POLR1B-202ENST00000333990 FHOD3Q2V2M9 1422 aa15.26■□□□□ 0.03
POLR1B-202ENST00000333990 DDX10Q13206 875 aaKnown RBP15.25■□□□□ 0.03
POLR1B-202ENST00000333990 BICRAQ9NZM4 1560 aa15.25■□□□□ 0.03
POLR1B-202ENST00000333990 CDCA8Q53HL2 280 aa15.25■□□□□ 0.03
POLR1B-202ENST00000333990 PTPRGP23470 1445 aa15.25■□□□□ 0.03
POLR1B-202ENST00000333990 IGF1RP08069 1367 aa15.25■□□□□ 0.03
POLR1B-202ENST00000333990 CCDC18Q5T9S5 1454 aa15.25■□□□□ 0.03
POLR1B-202ENST00000333990 CANXP27824 592 aaKnown RBP15.24■□□□□ 0.03
POLR1B-202ENST00000333990 RAD54L2Q9Y4B4 1467 aa15.23■□□□□ 0.03
POLR1B-202ENST00000333990 HDGFP51858 240 aaKnown RBP15.23■□□□□ 0.03
POLR1B-202ENST00000333990 MRC2Q9UBG0 1479 aa15.22■□□□□ 0.03
POLR1B-202ENST00000333990 C14orf37Q86TY3 774 aa15.21■□□□□ 0.02
POLR1B-202ENST00000333990 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
POLR1B-202ENST00000333990 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
POLR1B-202ENST00000333990 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
POLR1B-202ENST00000333990 ANKRD30AQ9BXX3 1397 aa15.19■□□□□ 0.02
POLR1B-202ENST00000333990 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
POLR1B-202ENST00000333990 TIMELESSQ9UNS1 1208 aa15.18■□□□□ 0.02
POLR1B-202ENST00000333990 NESP48681 1621 aa15.16■□□□□ 0.02
POLR1B-202ENST00000333990 SETD5Q9C0A6 1442 aa15.16■□□□□ 0.02
POLR1B-202ENST00000333990 GGT6Q6P531 493 aa15.16■□□□□ 0.02
POLR1B-202ENST00000333990 AQRO60306 1485 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■■■■■ 31.8
POLR1B-202ENST00000333990 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
POLR1B-202ENST00000333990 CARD11Q9BXL7 1154 aa15.15■□□□□ 0.02
POLR1B-202ENST00000333990 MLECQ14165 292 aa15.15■□□□□ 0.02
POLR1B-202ENST00000333990 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
POLR1B-202ENST00000333990 CYB5RLQ6IPT4 315 aa15.13■□□□□ 0.01
POLR1B-202ENST00000333990 SPAG9O60271 1321 aaKnown RBP15.12■□□□□ 0.01
POLR1B-202ENST00000333990 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
POLR1B-202ENST00000333990 POGKQ9P215 609 aa15.1■□□□□ 0.01
POLR1B-202ENST00000333990 FAM9BQ8IZU0 186 aa15.09■□□□□ 0.01
POLR1B-202ENST00000333990 LAMC3Q9Y6N6 1575 aa15.09■□□□□ 0.01
POLR1B-202ENST00000333990 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0.01
POLR1B-202ENST00000333990 MRS2Q9HD23 443 aa15.08■□□□□ 0.01
POLR1B-202ENST00000333990 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
POLR1B-202ENST00000333990 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0
POLR1B-202ENST00000333990 PKD2Q13563 968 aa15.08■□□□□ 0
POLR1B-202ENST00000333990 NUP155O75694 1391 aa15.07■□□□□ 0
POLR1B-202ENST00000333990 SIN3AQ96ST3 1273 aa15.06■□□□□ 0
POLR1B-202ENST00000333990 KIF3BO15066 747 aa15.06■□□□□ 0
POLR1B-202ENST00000333990 HNRNPMP52272 730 aaKnown RBP eCLIP15.06■□□□□ 0
POLR1B-202ENST00000333990 DCAF11Q8TEB1 546 aa15.06■□□□□ 0
POLR1B-202ENST00000333990 KNSTRNQ9Y448 316 aa15.05■□□□□ -0
POLR1B-202ENST00000333990 HIRIP3Q9BW71 556 aaPredicted RBP15.04■□□□□ -0
POLR1B-202ENST00000333990 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
POLR1B-202ENST00000333990 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
POLR1B-202ENST00000333990 CFAP53Q96M91 514 aa15.04■□□□□ -0
POLR1B-202ENST00000333990 TOP2BQ02880 1626 aa15.02■□□□□ -0
POLR1B-202ENST00000333990 ERICH3Q5RHP9 1530 aa15.01□□□□□ -0.01
POLR1B-202ENST00000333990 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
POLR1B-202ENST00000333990 HAP1P54257 671 aaPredicted RBP15.01□□□□□ -0.01
POLR1B-202ENST00000333990 MPHOSPH9Q99550 1183 aa15.01□□□□□ -0.01
POLR1B-202ENST00000333990 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
POLR1B-202ENST00000333990 PEG3Q9GZU2 1588 aa15□□□□□ -0.01
POLR1B-202ENST00000333990 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.99□□□□□ -0.01
POLR1B-202ENST00000333990 RAB3GAP2Q9H2M9 1393 aa14.99□□□□□ -0.01
POLR1B-202ENST00000333990 TMF1P82094 1093 aa14.99□□□□□ -0.01
POLR1B-202ENST00000333990 CUX1P39880 1505 aa14.98□□□□□ -0.01
POLR1B-202ENST00000333990 WASHC2CQ9Y4E1 1318 aa14.98□□□□□ -0.01
POLR1B-202ENST00000333990 KIF21BO75037 1637 aa14.96□□□□□ -0.02
POLR1B-202ENST00000333990 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.02
POLR1B-202ENST00000333990 GTF3C3Q9Y5Q9 886 aa14.95□□□□□ -0.02
POLR1B-202ENST00000333990 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
POLR1B-202ENST00000333990 NPM2Q86SE8 214 aaKnown RBP14.94□□□□□ -0.02
POLR1B-202ENST00000333990 ZBTB7CA1YPR0 619 aa14.94□□□□□ -0.02
POLR1B-202ENST00000333990 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
POLR1B-202ENST00000333990 NUDCQ9Y266 331 aa14.92□□□□□ -0.02
POLR1B-202ENST00000333990 FAM69CQ0P6D2 419 aa14.92□□□□□ -0.02
POLR1B-202ENST00000333990 MYOM3Q5VTT5 1437 aa14.92□□□□□ -0.02
POLR1B-202ENST00000333990 SYNJ2O15056 1496 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms