RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 DNAJC5BQ9UF47 199 aa30.24■■■□□ 2.43
LINC01006-201ENST00000333319 LRRC9Q6ZRR7 1453 aa30.24■■■□□ 2.43
LINC01006-201ENST00000333319 ITGAEP38570 1179 aa30.22■■■□□ 2.43
LINC01006-201ENST00000333319 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
LINC01006-201ENST00000333319 PDS5BQ9NTI5 1447 aa30.21■■■□□ 2.43
LINC01006-201ENST00000333319 PCF11O94913 1555 aaKnown RBP30.2■■■□□ 2.43
LINC01006-201ENST00000333319 FHOD3Q2V2M9 1422 aa30.19■■■□□ 2.42
LINC01006-201ENST00000333319 CTTNBP2Q8WZ74 1663 aa30.17■■■□□ 2.42
LINC01006-201ENST00000333319 ATP1B4Q9UN42 357 aaPredicted RBP30.16■■■□□ 2.42
LINC01006-201ENST00000333319 EFCAB5A4FU69 1503 aa30.16■■■□□ 2.42
LINC01006-201ENST00000333319 TDRD9Q8NDG6 1382 aaKnown RBP30.16■■■□□ 2.42
LINC01006-201ENST00000333319 CFAP43Q8NDM7 1665 aa30.15■■■□□ 2.42
LINC01006-201ENST00000333319 ACIN1Q9UKV3 1341 aaKnown RBP30.14■■■□□ 2.42
LINC01006-201ENST00000333319 PHLDB1Q86UU1 1377 aa30.12■■■□□ 2.41
LINC01006-201ENST00000333319 ABCA5Q8WWZ7 1642 aa30.11■■■□□ 2.41
LINC01006-201ENST00000333319 NEUROD1Q13562 356 aa30.11■■■□□ 2.41
LINC01006-201ENST00000333319 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
LINC01006-201ENST00000333319 GAPVD1Q14C86 1478 aa30.08■■■□□ 2.41
LINC01006-201ENST00000333319 FYCO1Q9BQS8 1478 aa30.08■■■□□ 2.41
LINC01006-201ENST00000333319 CASKIN1Q8WXD9 1431 aa30.06■■■□□ 2.4
LINC01006-201ENST00000333319 CENPBP07199 599 aaPredicted RBP30.05■■■□□ 2.4
LINC01006-201ENST00000333319 AQRO60306 1485 aaKnown RBP eCLIP30.04■■■□□ 2.4
LINC01006-201ENST00000333319 RAB3GAP2Q9H2M9 1393 aa30.03■■■□□ 2.4
LINC01006-201ENST00000333319 FAM50AQ14320 339 aaKnown RBP30■■■□□ 2.39
LINC01006-201ENST00000333319 FMN1Q68DA7 1419 aa29.99■■■□□ 2.39
LINC01006-201ENST00000333319 MIER1Q8N108 512 aa29.98■■■□□ 2.39
LINC01006-201ENST00000333319 SETD5Q9C0A6 1442 aa29.95■■■□□ 2.38
LINC01006-201ENST00000333319 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
LINC01006-201ENST00000333319 SNAPC4Q5SXM2 1469 aa29.91■■■□□ 2.38
LINC01006-201ENST00000333319 SAMD9Q5K651 1589 aa29.91■■■□□ 2.38
LINC01006-201ENST00000333319 MAPKBP1O60336 1514 aa29.85■■■□□ 2.37
LINC01006-201ENST00000333319 YTHDC1Q96MU7 727 aaKnown RBP29.82■■■□□ 2.36
LINC01006-201ENST00000333319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.8■■■□□ 2.36
LINC01006-201ENST00000333319 MTUS2Q5JR59 1369 aa29.79■■■□□ 2.36
LINC01006-201ENST00000333319 PBRM1Q86U86 1689 aa29.77■■■□□ 2.36
LINC01006-201ENST00000333319 LRRIQ1Q96JM4 1722 aa29.76■■■□□ 2.36
LINC01006-201ENST00000333319 GTF3C3Q9Y5Q9 886 aa29.76■■■□□ 2.35
LINC01006-201ENST00000333319 GRIN2BQ13224 1484 aa29.75■■■□□ 2.35
LINC01006-201ENST00000333319 FGD6Q6ZV73 1430 aa29.75■■■□□ 2.35
LINC01006-201ENST00000333319 MRC2Q9UBG0 1479 aa29.75■■■□□ 2.35
LINC01006-201ENST00000333319 THOC2Q8NI27 1593 aaKnown RBP29.68■■■□□ 2.34
LINC01006-201ENST00000333319 ADAMTS12P58397 1594 aa29.65■■■□□ 2.34
LINC01006-201ENST00000333319 NCOA2Q15596 1464 aa29.64■■■□□ 2.34
LINC01006-201ENST00000333319 SIN3AQ96ST3 1273 aa29.64■■■□□ 2.33
LINC01006-201ENST00000333319 IQGAP2Q13576 1575 aa29.62■■■□□ 2.33
LINC01006-201ENST00000333319 SUPT6HQ7KZ85 1726 aaKnown RBP29.6■■■□□ 2.33
LINC01006-201ENST00000333319 EHBP1L1Q8N3D4 1523 aa29.6■■■□□ 2.33
LINC01006-201ENST00000333319 MYOM3Q5VTT5 1437 aa29.6■■■□□ 2.33
LINC01006-201ENST00000333319 PTPRKQ15262 1439 aa29.56■■■□□ 2.32
LINC01006-201ENST00000333319 CCDC18Q5T9S5 1454 aa29.55■■■□□ 2.32
LINC01006-201ENST00000333319 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
LINC01006-201ENST00000333319 ZNF608Q9ULD9 1512 aaPredicted RBP29.54■■■□□ 2.32
LINC01006-201ENST00000333319 MAGI3Q5TCQ9 1506 aa29.53■■■□□ 2.32
LINC01006-201ENST00000333319 HECW1Q76N89 1606 aa29.51■■■□□ 2.32
LINC01006-201ENST00000333319 UGGT2Q9NYU1 1516 aa29.51■■■□□ 2.31
LINC01006-201ENST00000333319 HFM1A2PYH4 1435 aa29.51■■■□□ 2.31
LINC01006-201ENST00000333319 WDR62O43379 1518 aa29.5■■■□□ 2.31
LINC01006-201ENST00000333319 TIMELESSQ9UNS1 1208 aa29.48■■■□□ 2.31
LINC01006-201ENST00000333319 ARHGEF11O15085 1522 aa29.48■■■□□ 2.31
LINC01006-201ENST00000333319 PTPN23Q9H3S7 1636 aa29.47■■■□□ 2.31
LINC01006-201ENST00000333319 EPRSP07814 1512 aaKnown RBP29.45■■■□□ 2.31
LINC01006-201ENST00000333319 NAIPQ13075 1403 aa29.42■■■□□ 2.3
LINC01006-201ENST00000333319 UACAQ9BZF9 1416 aa29.4■■■□□ 2.3
LINC01006-201ENST00000333319 CDK13Q14004 1512 aaKnown RBP29.4■■■□□ 2.3
LINC01006-201ENST00000333319 ARID3CA6NKF2 412 aa29.37■■■□□ 2.29
LINC01006-201ENST00000333319 PPP1R15AO75807 674 aaPredicted RBP29.37■■■□□ 2.29
LINC01006-201ENST00000333319 KIAA0586Q9BVV6 1533 aa29.36■■■□□ 2.29
LINC01006-201ENST00000333319 TCOF1Q13428 1488 aaKnown RBP29.35■■■□□ 2.29
LINC01006-201ENST00000333319 EIF4G3O43432 1585 aaKnown RBP29.34■■■□□ 2.29
LINC01006-201ENST00000333319 ERCC6Q03468 1493 aa29.31■■■□□ 2.28
LINC01006-201ENST00000333319 GRIN2AQ12879 1464 aa29.3■■■□□ 2.28
LINC01006-201ENST00000333319 DISP1Q96F81 1524 aa29.3■■■□□ 2.28
LINC01006-201ENST00000333319 KIAA0556O60303 1618 aa29.3■■■□□ 2.28
LINC01006-201ENST00000333319 CHIC2Q9UKJ5 165 aa29.29■■■□□ 2.28
LINC01006-201ENST00000333319 RRP7BPQ9NSQ0 103 aa29.29■■■□□ 2.28
LINC01006-201ENST00000333319 TONSLQ96HA7 1378 aa29.28■■■□□ 2.28
LINC01006-201ENST00000333319 PELP1Q8IZL8 1130 aaKnown RBP29.27■■■□□ 2.28
LINC01006-201ENST00000333319 MIA2Q96PC5 1412 aa29.26■■■□□ 2.27
LINC01006-201ENST00000333319 DDX10Q13206 875 aaKnown RBP29.22■■■□□ 2.27
LINC01006-201ENST00000333319 GCC2Q8IWJ2 1684 aa29.21■■■□□ 2.27
LINC01006-201ENST00000333319 HIRIP3Q9BW71 556 aaPredicted RBP29.19■■■□□ 2.26
LINC01006-201ENST00000333319 NUP153P49790 1475 aaKnown RBP29.18■■■□□ 2.26
LINC01006-201ENST00000333319 MAGI1Q96QZ7 1491 aaPredicted RBP29.18■■■□□ 2.26
LINC01006-201ENST00000333319 CHMP7Q8WUX9 453 aaPredicted RBP29.17■■■□□ 2.26
LINC01006-201ENST00000333319 AKNAQ7Z591 1439 aa29.17■■■□□ 2.26
LINC01006-201ENST00000333319 RAPGEF6Q8TEU7 1601 aa29.17■■■□□ 2.26
LINC01006-201ENST00000333319 TRIM52Q96A61 297 aa29.13■■■□□ 2.25
LINC01006-201ENST00000333319 SYNJ2O15056 1496 aa29.12■■■□□ 2.25
LINC01006-201ENST00000333319 KDM6BO15054 1643 aa29.12■■■□□ 2.25
LINC01006-201ENST00000333319 CEP170Q5SW79 1584 aa29.11■■■□□ 2.25
LINC01006-201ENST00000333319 FBLN2P98095 1184 aa29.1■■■□□ 2.25
LINC01006-201ENST00000333319 CDK11AQ9UQ88 783 aaPredicted RBP29.1■■■□□ 2.25
LINC01006-201ENST00000333319 KCNH8Q96L42 1107 aa29.1■■■□□ 2.25
LINC01006-201ENST00000333319 DENND4BO75064 1496 aaPredicted RBP29.07■■■□□ 2.24
LINC01006-201ENST00000333319 DAPK1P53355 1430 aa29.05■■■□□ 2.24
LINC01006-201ENST00000333319 ZNF644Q9H582 1327 aaPredicted RBP29.04■■■□□ 2.24
LINC01006-201ENST00000333319 KDM5BQ9UGL1 1544 aa29.03■■■□□ 2.24
LINC01006-201ENST00000333319 MPHOSPH9Q99550 1183 aa29.02■■■□□ 2.24
LINC01006-201ENST00000333319 PLB1Q6P1J6 1458 aa29.01■■■□□ 2.23
LINC01006-201ENST00000333319 ABCC5O15440 1437 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms