RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 UBTFP17480 764 aaKnown RBP30.52■■■□□ 2.48
TSSC4-201ENST00000333256 KIAA0586Q9BVV6 1533 aa30.39■■■□□ 2.46
TSSC4-201ENST00000333256 CLASP1Q7Z460 1538 aa30.38■■■□□ 2.45
TSSC4-201ENST00000333256 CTTNBP2Q8WZ74 1663 aa30.35■■■□□ 2.45
TSSC4-201ENST00000333256 RANGAP1P46060 587 aaPredicted RBP30.35■■■□□ 2.45
TSSC4-201ENST00000333256 IQGAP2Q13576 1575 aa30.32■■■□□ 2.44
TSSC4-201ENST00000333256 JPH4Q96JJ6 628 aa30.28■■■□□ 2.44
TSSC4-201ENST00000333256 TNIKQ9UKE5 1360 aa30.28■■■□□ 2.44
TSSC4-201ENST00000333256 SHROOM2Q13796 1616 aa30.18■■■□□ 2.42
TSSC4-201ENST00000333256 PRG4Q92954 1404 aaPredicted RBP30.17■■■□□ 2.42
TSSC4-201ENST00000333256 UGGT2Q9NYU1 1516 aa30.15■■■□□ 2.42
TSSC4-201ENST00000333256 ERCC6L2Q5T890 1561 aa30.12■■■□□ 2.41
TSSC4-201ENST00000333256 P3H3Q8IVL6 736 aa30.11■■■□□ 2.41
TSSC4-201ENST00000333256 CEP162Q5TB80 1403 aa30.09■■■□□ 2.41
TSSC4-201ENST00000333256 DISP1Q96F81 1524 aa30.09■■■□□ 2.41
TSSC4-201ENST00000333256 CLIP1P30622 1438 aa30.06■■■□□ 2.4
TSSC4-201ENST00000333256 CARMIL2Q6F5E8 1435 aa30.05■■■□□ 2.4
TSSC4-201ENST00000333256 TTBK1Q5TCY1 1321 aaPredicted RBP30.04■■■□□ 2.4
TSSC4-201ENST00000333256 ARHGEF11O15085 1522 aa30.03■■■□□ 2.4
TSSC4-201ENST00000333256 KIAA0556O60303 1618 aa30.03■■■□□ 2.4
TSSC4-201ENST00000333256 ARHGAP35Q9NRY4 1499 aa30.02■■■□□ 2.4
TSSC4-201ENST00000333256 SAMD9Q5K651 1589 aa30.02■■■□□ 2.4
TSSC4-201ENST00000333256 DNAJC5Q9H3Z4 198 aa30■■■□□ 2.39
TSSC4-201ENST00000333256 EFCAB5A4FU69 1503 aa29.98■■■□□ 2.39
TSSC4-201ENST00000333256 FHOD3Q2V2M9 1422 aa29.98■■■□□ 2.39
TSSC4-201ENST00000333256 RIMBP3CA6NJZ7 1639 aa29.95■■■□□ 2.39
TSSC4-201ENST00000333256 RIMBP3BA6NNM3 1639 aa29.95■■■□□ 2.39
TSSC4-201ENST00000333256 RIMBP3Q9UFD9 1639 aa29.95■■■□□ 2.39
TSSC4-201ENST00000333256 ARAP1Q96P48 1450 aa29.91■■■□□ 2.38
TSSC4-201ENST00000333256 PTPRGP23470 1445 aa29.87■■■□□ 2.37
TSSC4-201ENST00000333256 CYB5RLQ6IPT4 315 aa29.81■■■□□ 2.36
TSSC4-201ENST00000333256 PLB1Q6P1J6 1458 aa29.75■■■□□ 2.35
TSSC4-201ENST00000333256 FMN1Q68DA7 1419 aa29.74■■■□□ 2.35
TSSC4-201ENST00000333256 UACAQ9BZF9 1416 aa29.67■■■□□ 2.34
TSSC4-201ENST00000333256 ATP1B4Q9UN42 357 aaPredicted RBP29.67■■■□□ 2.34
TSSC4-201ENST00000333256 ARID3CA6NKF2 412 aa29.65■■■□□ 2.34
TSSC4-201ENST00000333256 VPS8Q8N3P4 1428 aa29.65■■■□□ 2.34
TSSC4-201ENST00000333256 ABCA8O94911 1581 aa29.65■■■□□ 2.34
TSSC4-201ENST00000333256 RAPGEF6Q8TEU7 1601 aa29.62■■■□□ 2.33
TSSC4-201ENST00000333256 PCF11O94913 1555 aaKnown RBP29.62■■■□□ 2.33
TSSC4-201ENST00000333256 ADCY10Q96PN6 1610 aa29.59■■■□□ 2.33
TSSC4-201ENST00000333256 ABCC2Q92887 1545 aa29.59■■■□□ 2.33
TSSC4-201ENST00000333256 CASKIN1Q8WXD9 1431 aa29.58■■■□□ 2.33
TSSC4-201ENST00000333256 NUP153P49790 1475 aaKnown RBP29.56■■■□□ 2.32
TSSC4-201ENST00000333256 UHRF1BP1LA0JNW5 1464 aa29.55■■■□□ 2.32
TSSC4-201ENST00000333256 FYCO1Q9BQS8 1478 aa29.53■■■□□ 2.32
TSSC4-201ENST00000333256 HECW1Q76N89 1606 aa29.51■■■□□ 2.31
TSSC4-201ENST00000333256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.47■■■□□ 2.31
TSSC4-201ENST00000333256 HNRNPUL2Q1KMD3 747 aaKnown RBP29.47■■■□□ 2.31
TSSC4-201ENST00000333256 CDK13Q14004 1512 aaKnown RBP29.46■■■□□ 2.31
TSSC4-201ENST00000333256 EPRSP07814 1512 aaKnown RBP29.45■■■□□ 2.31
TSSC4-201ENST00000333256 ATP10BO94823 1461 aa29.45■■■□□ 2.31
TSSC4-201ENST00000333256 NPM1P06748 294 aaKnown RBP eCLIP29.44■■■□□ 2.3
TSSC4-201ENST00000333256 KDM5BQ9UGL1 1544 aa29.44■■■□□ 2.3
TSSC4-201ENST00000333256 LRRIQ1Q96JM4 1722 aa29.43■■■□□ 2.3
TSSC4-201ENST00000333256 ZCCHC11Q5TAX3 1644 aaKnown RBP29.4■■■□□ 2.3
TSSC4-201ENST00000333256 CCDC18Q5T9S5 1454 aa29.37■■■□□ 2.29
TSSC4-201ENST00000333256 APLP2Q06481 763 aa29.34■■■□□ 2.29
TSSC4-201ENST00000333256 TIAM1Q13009 1591 aa29.29■■■□□ 2.28
TSSC4-201ENST00000333256 ASXL2Q76L83 1435 aa29.28■■■□□ 2.28
TSSC4-201ENST00000333256 PLEKHD1A6NEE1 506 aa29.26■■■□□ 2.27
TSSC4-201ENST00000333256 CFAP43Q8NDM7 1665 aa29.25■■■□□ 2.27
TSSC4-201ENST00000333256 KANK4Q5T7N3 995 aaPredicted RBP29.25■■■□□ 2.27
TSSC4-201ENST00000333256 CDK11AQ9UQ88 783 aaPredicted RBP29.25■■■□□ 2.27
TSSC4-201ENST00000333256 MAGI3Q5TCQ9 1506 aa29.25■■■□□ 2.27
TSSC4-201ENST00000333256 PPARGC1BQ86YN6 1023 aaKnown RBP29.24■■■□□ 2.27
TSSC4-201ENST00000333256 MAPKBP1O60336 1514 aa29.22■■■□□ 2.27
TSSC4-201ENST00000333256 MAP3K1Q13233 1512 aa29.22■■■□□ 2.27
TSSC4-201ENST00000333256 KCNH8Q96L42 1107 aa29.21■■■□□ 2.27
TSSC4-201ENST00000333256 WDR7Q9Y4E6 1490 aa29.21■■■□□ 2.27
TSSC4-201ENST00000333256 MTUS2Q5JR59 1369 aa29.21■■■□□ 2.27
TSSC4-201ENST00000333256 TROQ12816 1431 aaPredicted RBP29.17■■■□□ 2.26
TSSC4-201ENST00000333256 LRRC9Q6ZRR7 1453 aa29.17■■■□□ 2.26
TSSC4-201ENST00000333256 EHBP1L1Q8N3D4 1523 aa29.11■■■□□ 2.25
TSSC4-201ENST00000333256 KIF14Q15058 1648 aa29.09■■■□□ 2.25
TSSC4-201ENST00000333256 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
TSSC4-201ENST00000333256 FAM69CQ0P6D2 419 aa29.04■■■□□ 2.24
TSSC4-201ENST00000333256 DIP2BQ9P265 1576 aa29.02■■■□□ 2.24
TSSC4-201ENST00000333256 TRHP20396 242 aaPredicted RBP29■■■□□ 2.23
TSSC4-201ENST00000333256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29■■■□□ 2.23
TSSC4-201ENST00000333256 NCOA2Q15596 1464 aa29■■■□□ 2.23
TSSC4-201ENST00000333256 SUPT6HQ7KZ85 1726 aaKnown RBP28.98■■■□□ 2.23
TSSC4-201ENST00000333256 TTC37Q6PGP7 1564 aa28.98■■■□□ 2.23
TSSC4-201ENST00000333256 ABCA9Q8IUA7 1624 aa28.93■■■□□ 2.22
TSSC4-201ENST00000333256 GLI2P10070 1586 aa28.92■■■□□ 2.22
TSSC4-201ENST00000333256 KIF13AQ9H1H9 1805 aa28.91■■■□□ 2.22
TSSC4-201ENST00000333256 CCNB3Q8WWL7 1395 aa28.91■■■□□ 2.22
TSSC4-201ENST00000333256 PHLDB1Q86UU1 1377 aa28.9■■■□□ 2.22
TSSC4-201ENST00000333256 CD109Q6YHK3 1445 aa28.89■■■□□ 2.22
TSSC4-201ENST00000333256 GPATCH8Q9UKJ3 1502 aaKnown RBP28.85■■■□□ 2.21
TSSC4-201ENST00000333256 MAP3K4Q9Y6R4 1608 aa28.85■■■□□ 2.21
TSSC4-201ENST00000333256 PLCH2O75038 1416 aa28.82■■■□□ 2.2
TSSC4-201ENST00000333256 CDC42BPAQ5VT25 1732 aa28.81■■■□□ 2.2
TSSC4-201ENST00000333256 MYOM3Q5VTT5 1437 aa28.81■■■□□ 2.2
TSSC4-201ENST00000333256 MYO5CQ9NQX4 1742 aa28.81■■■□□ 2.2
TSSC4-201ENST00000333256 CFDP1Q9UEE9 299 aaPredicted RBP28.8■■■□□ 2.2
TSSC4-201ENST00000333256 TSPOAP1O95153 1857 aa28.79■■■□□ 2.2
TSSC4-201ENST00000333256 ARHGAP5Q13017 1502 aa28.78■■■□□ 2.2
TSSC4-201ENST00000333256 PREX2Q70Z35 1606 aa28.78■■■□□ 2.2
TSSC4-201ENST00000333256 ZNF777Q9ULD5 760 aaPredicted RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms