RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 ARAP1Q96P48 1450 aa27.37■■□□□ 1.97
C11orf88-201ENST00000332814 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
C11orf88-201ENST00000332814 CYB5RLQ6IPT4 315 aa27.36■■□□□ 1.97
C11orf88-201ENST00000332814 SHROOM2Q13796 1616 aa27.35■■□□□ 1.97
C11orf88-201ENST00000332814 JPH4Q96JJ6 628 aa27.32■■□□□ 1.96
C11orf88-201ENST00000332814 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
C11orf88-201ENST00000332814 PRG4Q92954 1404 aaPredicted RBP27.29■■□□□ 1.96
C11orf88-201ENST00000332814 PRXQ9BXM0 1461 aa27.27■■□□□ 1.96
C11orf88-201ENST00000332814 FAM9AQ8IZU1 332 aaPredicted RBP27.27■■□□□ 1.96
C11orf88-201ENST00000332814 ERCC6L2Q5T890 1561 aa27.26■■□□□ 1.95
C11orf88-201ENST00000332814 IQGAP2Q13576 1575 aa27.24■■□□□ 1.95
C11orf88-201ENST00000332814 CTTNBP2Q8WZ74 1663 aa27.14■■□□□ 1.94
C11orf88-201ENST00000332814 CARMIL2Q6F5E8 1435 aa27.14■■□□□ 1.93
C11orf88-201ENST00000332814 UGGT2Q9NYU1 1516 aa27.06■■□□□ 1.92
C11orf88-201ENST00000332814 KIF21BO75037 1637 aa27.05■■□□□ 1.92
C11orf88-201ENST00000332814 TNIKQ9UKE5 1360 aa27■■□□□ 1.91
C11orf88-201ENST00000332814 TTBK1Q5TCY1 1321 aaPredicted RBP27■■□□□ 1.91
C11orf88-201ENST00000332814 GOLGA3Q08378 1498 aa26.99■■□□□ 1.91
C11orf88-201ENST00000332814 PTPRGP23470 1445 aa26.99■■□□□ 1.91
C11orf88-201ENST00000332814 DISP1Q96F81 1524 aa26.98■■□□□ 1.91
C11orf88-201ENST00000332814 KIAA0556O60303 1618 aa26.97■■□□□ 1.91
C11orf88-201ENST00000332814 EHMT2Q96KQ7 1210 aa26.93■■□□□ 1.9
C11orf88-201ENST00000332814 UBTFP17480 764 aaKnown RBP26.89■■□□□ 1.9
C11orf88-201ENST00000332814 NPM1P06748 294 aaKnown RBP eCLIP26.88■■□□□ 1.89
C11orf88-201ENST00000332814 TRHP20396 242 aaPredicted RBP26.86■■□□□ 1.89
C11orf88-201ENST00000332814 RANGAP1P46060 587 aaPredicted RBP26.84■■□□□ 1.89
C11orf88-201ENST00000332814 ADCY10Q96PN6 1610 aa26.83■■□□□ 1.89
C11orf88-201ENST00000332814 UACAQ9BZF9 1416 aa26.8■■□□□ 1.88
C11orf88-201ENST00000332814 P3H3Q8IVL6 736 aa26.78■■□□□ 1.88
C11orf88-201ENST00000332814 SAMD9Q5K651 1589 aa26.77■■□□□ 1.88
C11orf88-201ENST00000332814 ABCC2Q92887 1545 aa26.75■■□□□ 1.87
C11orf88-201ENST00000332814 UHRF1BP1LA0JNW5 1464 aa26.74■■□□□ 1.87
C11orf88-201ENST00000332814 EFCAB5A4FU69 1503 aa26.72■■□□□ 1.87
C11orf88-201ENST00000332814 MAPKBP1O60336 1514 aa26.69■■□□□ 1.86
C11orf88-201ENST00000332814 PLB1Q6P1J6 1458 aa26.68■■□□□ 1.86
C11orf88-201ENST00000332814 FHOD3Q2V2M9 1422 aa26.65■■□□□ 1.86
C11orf88-201ENST00000332814 ABCA8O94911 1581 aa26.63■■□□□ 1.85
C11orf88-201ENST00000332814 KDM5BQ9UGL1 1544 aa26.6■■□□□ 1.85
C11orf88-201ENST00000332814 ZCCHC11Q5TAX3 1644 aaKnown RBP26.57■■□□□ 1.84
C11orf88-201ENST00000332814 ABCC10Q5T3U5 1492 aa26.55■■□□□ 1.84
C11orf88-201ENST00000332814 ASXL2Q76L83 1435 aa26.55■■□□□ 1.84
C11orf88-201ENST00000332814 RAPGEF6Q8TEU7 1601 aa26.54■■□□□ 1.84
C11orf88-201ENST00000332814 ARHGAP35Q9NRY4 1499 aa26.54■■□□□ 1.84
C11orf88-201ENST00000332814 FAM69CQ0P6D2 419 aa26.53■■□□□ 1.84
C11orf88-201ENST00000332814 DIP2BQ9P265 1576 aa26.5■■□□□ 1.83
C11orf88-201ENST00000332814 ARID3CA6NKF2 412 aa26.49■■□□□ 1.83
C11orf88-201ENST00000332814 FMN1Q68DA7 1419 aa26.48■■□□□ 1.83
C11orf88-201ENST00000332814 KIF13AQ9H1H9 1805 aa26.48■■□□□ 1.83
C11orf88-201ENST00000332814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.45■■□□□ 1.82
C11orf88-201ENST00000332814 HNRNPUL2Q1KMD3 747 aaKnown RBP26.45■■□□□ 1.82
C11orf88-201ENST00000332814 CLIP1P30622 1438 aa26.44■■□□□ 1.82
C11orf88-201ENST00000332814 WDR7Q9Y4E6 1490 aa26.43■■□□□ 1.82
C11orf88-201ENST00000332814 ATP10BO94823 1461 aa26.42■■□□□ 1.82
C11orf88-201ENST00000332814 NUP153P49790 1475 aaKnown RBP26.42■■□□□ 1.82
C11orf88-201ENST00000332814 ATP1B4Q9UN42 357 aaPredicted RBP26.39■■□□□ 1.82
C11orf88-201ENST00000332814 EPRSP07814 1512 aaKnown RBP26.39■■□□□ 1.81
C11orf88-201ENST00000332814 GLI2P10070 1586 aa26.37■■□□□ 1.81
C11orf88-201ENST00000332814 HECW1Q76N89 1606 aa26.36■■□□□ 1.81
C11orf88-201ENST00000332814 LOC105371045A0A1W2PR82 267 aa26.33■■□□□ 1.81
C11orf88-201ENST00000332814 KCNH8Q96L42 1107 aa26.33■■□□□ 1.81
C11orf88-201ENST00000332814 CEP162Q5TB80 1403 aa26.32■■□□□ 1.8
C11orf88-201ENST00000332814 PLEKHD1A6NEE1 506 aa26.27■■□□□ 1.8
C11orf88-201ENST00000332814 TSPOAP1O95153 1857 aa26.26■■□□□ 1.79
C11orf88-201ENST00000332814 PCF11O94913 1555 aaKnown RBP26.25■■□□□ 1.79
C11orf88-201ENST00000332814 CDK13Q14004 1512 aaKnown RBP26.25■■□□□ 1.79
C11orf88-201ENST00000332814 CASKIN1Q8WXD9 1431 aa26.24■■□□□ 1.79
C11orf88-201ENST00000332814 MAP3K4Q9Y6R4 1608 aa26.24■■□□□ 1.79
C11orf88-201ENST00000332814 CDK11AQ9UQ88 783 aaPredicted RBP26.21■■□□□ 1.79
C11orf88-201ENST00000332814 TEX14Q8IWB6 1497 aa26.21■■□□□ 1.79
C11orf88-201ENST00000332814 CFAP43Q8NDM7 1665 aa26.2■■□□□ 1.78
C11orf88-201ENST00000332814 FYCO1Q9BQS8 1478 aa26.2■■□□□ 1.78
C11orf88-201ENST00000332814 CD109Q6YHK3 1445 aa26.19■■□□□ 1.78
C11orf88-201ENST00000332814 CCDC18Q5T9S5 1454 aa26.18■■□□□ 1.78
C11orf88-201ENST00000332814 PPRC1Q5VV67 1664 aaKnown RBP26.14■■□□□ 1.78
C11orf88-201ENST00000332814 ABCA9Q8IUA7 1624 aa26.14■■□□□ 1.77
C11orf88-201ENST00000332814 KDM6BO15054 1643 aa26.13■■□□□ 1.77
C11orf88-201ENST00000332814 MAGI3Q5TCQ9 1506 aa26.11■■□□□ 1.77
C11orf88-201ENST00000332814 LRRIQ1Q96JM4 1722 aa26.08■■□□□ 1.77
C11orf88-201ENST00000332814 TROQ12816 1431 aaPredicted RBP26.06■■□□□ 1.76
C11orf88-201ENST00000332814 KIF14Q15058 1648 aa26.04■■□□□ 1.76
C11orf88-201ENST00000332814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.04■■□□□ 1.76
C11orf88-201ENST00000332814 TTC37Q6PGP7 1564 aa26■■□□□ 1.75
C11orf88-201ENST00000332814 VPS8Q8N3P4 1428 aa26■■□□□ 1.75
C11orf88-201ENST00000332814 PHLDB1Q86UU1 1377 aa25.95■■□□□ 1.75
C11orf88-201ENST00000332814 NEO1Q92859 1461 aa25.95■■□□□ 1.74
C11orf88-201ENST00000332814 CFAP74Q9C0B2 1584 aa25.93■■□□□ 1.74
C11orf88-201ENST00000332814 MTUS2Q5JR59 1369 aa25.93■■□□□ 1.74
C11orf88-201ENST00000332814 FANCAO15360 1455 aa25.91■■□□□ 1.74
C11orf88-201ENST00000332814 COL17A1Q9UMD9 1497 aaPredicted RBP25.9■■□□□ 1.74
C11orf88-201ENST00000332814 PLCH2O75038 1416 aa25.89■■□□□ 1.74
C11orf88-201ENST00000332814 MYO5CQ9NQX4 1742 aa25.89■■□□□ 1.74
C11orf88-201ENST00000332814 ARAP3Q8WWN8 1544 aa25.88■■□□□ 1.73
C11orf88-201ENST00000332814 EHBP1L1Q8N3D4 1523 aa25.87■■□□□ 1.73
C11orf88-201ENST00000332814 ARHGAP5Q13017 1502 aa25.84■■□□□ 1.73
C11orf88-201ENST00000332814 AKNAQ7Z591 1439 aa25.84■■□□□ 1.73
C11orf88-201ENST00000332814 TIAM1Q13009 1591 aa25.83■■□□□ 1.73
C11orf88-201ENST00000332814 EFCAB2Q5VUJ9 269 aa25.83■■□□□ 1.73
C11orf88-201ENST00000332814 APLP2Q06481 763 aa25.82■■□□□ 1.72
C11orf88-201ENST00000332814 DENND4BO75064 1496 aaPredicted RBP25.79■■□□□ 1.72
C11orf88-201ENST00000332814 ADGRL1O94910 1474 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms