RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 FAM9AQ8IZU1 332 aaPredicted RBP34.98■■■■□ 3.19
YBX1-202ENST00000332220 CSRNP3Q8WYN3 585 aa34.98■■■■□ 3.19
YBX1-202ENST00000332220 SHROOM2Q13796 1616 aa34.96■■■■□ 3.19
YBX1-202ENST00000332220 CTTNBP2Q8WZ74 1663 aa34.89■■■■□ 3.18
YBX1-202ENST00000332220 KIAA0586Q9BVV6 1533 aa34.89■■■■□ 3.18
YBX1-202ENST00000332220 ERCC6L2Q5T890 1561 aa34.83■■■■□ 3.17
YBX1-202ENST00000332220 KIF21BO75037 1637 aa34.81■■■■□ 3.16
YBX1-202ENST00000332220 IQGAP2Q13576 1575 aa34.81■■■■□ 3.16
YBX1-202ENST00000332220 JPH4Q96JJ6 628 aa34.75■■■■□ 3.15
YBX1-202ENST00000332220 ARAP1Q96P48 1450 aa34.74■■■■□ 3.15
YBX1-202ENST00000332220 PRG4Q92954 1404 aaPredicted RBP34.71■■■■□ 3.15
YBX1-202ENST00000332220 UGGT2Q9NYU1 1516 aa34.6■■■■□ 3.13
YBX1-202ENST00000332220 CYB5RLQ6IPT4 315 aa34.56■■■■□ 3.12
YBX1-202ENST00000332220 GOLGA3Q08378 1498 aa34.55■■■■□ 3.12
YBX1-202ENST00000332220 DISP1Q96F81 1524 aa34.52■■■■□ 3.12
YBX1-202ENST00000332220 EHMT2Q96KQ7 1210 aa34.52■■■■□ 3.12
YBX1-202ENST00000332220 KIAA0556O60303 1618 aa34.49■■■■□ 3.11
YBX1-202ENST00000332220 CARMIL2Q6F5E8 1435 aa34.47■■■■□ 3.11
YBX1-202ENST00000332220 UBTFP17480 764 aaKnown RBP34.37■■■■□ 3.09
YBX1-202ENST00000332220 SAMD9Q5K651 1589 aa34.36■■■■□ 3.09
YBX1-202ENST00000332220 TNIKQ9UKE5 1360 aa34.35■■■■□ 3.09
YBX1-202ENST00000332220 PTPRGP23470 1445 aa34.3■■■■□ 3.08
YBX1-202ENST00000332220 TTBK1Q5TCY1 1321 aaPredicted RBP34.27■■■■□ 3.08
YBX1-202ENST00000332220 ADCY10Q96PN6 1610 aa34.26■■■■□ 3.07
YBX1-202ENST00000332220 RANGAP1P46060 587 aaPredicted RBP34.25■■■■□ 3.07
YBX1-202ENST00000332220 EFCAB5A4FU69 1503 aa34.2■■■■□ 3.07
YBX1-202ENST00000332220 P3H3Q8IVL6 736 aa34.19■■■■□ 3.06
YBX1-202ENST00000332220 FHOD3Q2V2M9 1422 aa34.11■■■■□ 3.05
YBX1-202ENST00000332220 UACAQ9BZF9 1416 aa34.09■■■■□ 3.05
YBX1-202ENST00000332220 ABCC2Q92887 1545 aa34.09■■■■□ 3.05
YBX1-202ENST00000332220 ARHGAP35Q9NRY4 1499 aa34.08■■■■□ 3.05
YBX1-202ENST00000332220 ABCA8O94911 1581 aa34.08■■■■□ 3.05
YBX1-202ENST00000332220 PLB1Q6P1J6 1458 aa34.07■■■■□ 3.05
YBX1-202ENST00000332220 UHRF1BP1LA0JNW5 1464 aa34.07■■■■□ 3.04
YBX1-202ENST00000332220 LOC105371045A0A1W2PR82 267 aa34.04■■■■□ 3.04
YBX1-202ENST00000332220 RAPGEF6Q8TEU7 1601 aa33.98■■■■□ 3.03
YBX1-202ENST00000332220 ZCCHC11Q5TAX3 1644 aaKnown RBP33.96■■■■□ 3.03
YBX1-202ENST00000332220 CLIP1P30622 1438 aa33.93■■■■□ 3.02
YBX1-202ENST00000332220 KDM5BQ9UGL1 1544 aa33.92■■■■□ 3.02
YBX1-202ENST00000332220 MAPKBP1O60336 1514 aa33.91■■■■□ 3.02
YBX1-202ENST00000332220 NPM1P06748 294 aaKnown RBP eCLIP33.9■■■■□ 3.02
YBX1-202ENST00000332220 CEP162Q5TB80 1403 aa33.87■■■■□ 3.01
YBX1-202ENST00000332220 KIF13AQ9H1H9 1805 aa33.86■■■■□ 3.01
YBX1-202ENST00000332220 FMN1Q68DA7 1419 aa33.81■■■■□ 3
YBX1-202ENST00000332220 NUP153P49790 1475 aaKnown RBP33.8■■■■□ 3
YBX1-202ENST00000332220 TRHP20396 242 aaPredicted RBP33.75■■■□□ 2.99
YBX1-202ENST00000332220 ASXL2Q76L83 1435 aa33.75■■■□□ 2.99
YBX1-202ENST00000332220 LRRIQ1Q96JM4 1722 aa33.75■■■□□ 2.99
YBX1-202ENST00000332220 ATP10BO94823 1461 aa33.75■■■□□ 2.99
YBX1-202ENST00000332220 PCF11O94913 1555 aaKnown RBP33.73■■■□□ 2.99
YBX1-202ENST00000332220 DIP2BQ9P265 1576 aa33.73■■■□□ 2.99
YBX1-202ENST00000332220 HECW1Q76N89 1606 aa33.73■■■□□ 2.99
YBX1-202ENST00000332220 ARID3CA6NKF2 412 aa33.73■■■□□ 2.99
YBX1-202ENST00000332220 ABCC10Q5T3U5 1492 aa33.69■■■□□ 2.98
YBX1-202ENST00000332220 CDK13Q14004 1512 aaKnown RBP33.63■■■□□ 2.97
YBX1-202ENST00000332220 WDR7Q9Y4E6 1490 aa33.63■■■□□ 2.97
YBX1-202ENST00000332220 CASKIN1Q8WXD9 1431 aa33.62■■■□□ 2.97
YBX1-202ENST00000332220 EPRSP07814 1512 aaKnown RBP33.59■■■□□ 2.97
YBX1-202ENST00000332220 ATP1B4Q9UN42 357 aaPredicted RBP33.58■■■□□ 2.97
YBX1-202ENST00000332220 FYCO1Q9BQS8 1478 aa33.57■■■□□ 2.97
YBX1-202ENST00000332220 TSPOAP1O95153 1857 aa33.57■■■□□ 2.96
YBX1-202ENST00000332220 GLI2P10070 1586 aa33.55■■■□□ 2.96
YBX1-202ENST00000332220 FAM69CQ0P6D2 419 aa33.55■■■□□ 2.96
YBX1-202ENST00000332220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.54■■■□□ 2.96
YBX1-202ENST00000332220 HNRNPUL2Q1KMD3 747 aaKnown RBP33.54■■■□□ 2.96
YBX1-202ENST00000332220 MAP3K4Q9Y6R4 1608 aa33.48■■■□□ 2.95
YBX1-202ENST00000332220 CCDC18Q5T9S5 1454 aa33.45■■■□□ 2.95
YBX1-202ENST00000332220 PPRC1Q5VV67 1664 aaKnown RBP33.45■■■□□ 2.94
YBX1-202ENST00000332220 KCNH8Q96L42 1107 aa33.44■■■□□ 2.94
YBX1-202ENST00000332220 CFAP43Q8NDM7 1665 aa33.44■■■□□ 2.94
YBX1-202ENST00000332220 VPS8Q8N3P4 1428 aa33.43■■■□□ 2.94
YBX1-202ENST00000332220 ABCA9Q8IUA7 1624 aa33.39■■■□□ 2.94
YBX1-202ENST00000332220 PLEKHD1A6NEE1 506 aa33.39■■■□□ 2.94
YBX1-202ENST00000332220 MAGI3Q5TCQ9 1506 aa33.34■■■□□ 2.93
YBX1-202ENST00000332220 KIF14Q15058 1648 aa33.31■■■□□ 2.92
YBX1-202ENST00000332220 TROQ12816 1431 aaPredicted RBP33.29■■■□□ 2.92
YBX1-202ENST00000332220 CDK11AQ9UQ88 783 aaPredicted RBP33.29■■■□□ 2.92
YBX1-202ENST00000332220 TTC37Q6PGP7 1564 aa33.29■■■□□ 2.92
YBX1-202ENST00000332220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.28■■■□□ 2.92
YBX1-202ENST00000332220 CD109Q6YHK3 1445 aa33.26■■■□□ 2.91
YBX1-202ENST00000332220 TIAM1Q13009 1591 aa33.22■■■□□ 2.91
YBX1-202ENST00000332220 MYO5CQ9NQX4 1742 aa33.19■■■□□ 2.9
YBX1-202ENST00000332220 TEX14Q8IWB6 1497 aa33.17■■■□□ 2.9
YBX1-202ENST00000332220 EHBP1L1Q8N3D4 1523 aa33.13■■■□□ 2.89
YBX1-202ENST00000332220 MAP3K1Q13233 1512 aa33.11■■■□□ 2.89
YBX1-202ENST00000332220 MTUS2Q5JR59 1369 aa33.1■■■□□ 2.89
YBX1-202ENST00000332220 KDM6BO15054 1643 aa33.1■■■□□ 2.89
YBX1-202ENST00000332220 CDC42BPAQ5VT25 1732 aa33.1■■■□□ 2.89
YBX1-202ENST00000332220 CDC42BPBQ9Y5S2 1711 aa33.08■■■□□ 2.89
YBX1-202ENST00000332220 PREX2Q70Z35 1606 aa33.05■■■□□ 2.88
YBX1-202ENST00000332220 SUPT6HQ7KZ85 1726 aaKnown RBP33.03■■■□□ 2.88
YBX1-202ENST00000332220 CFAP74Q9C0B2 1584 aa33.03■■■□□ 2.88
YBX1-202ENST00000332220 LRRC9Q6ZRR7 1453 aa33.02■■■□□ 2.88
YBX1-202ENST00000332220 PLCH2O75038 1416 aa33.02■■■□□ 2.88
YBX1-202ENST00000332220 ARAP3Q8WWN8 1544 aa33■■■□□ 2.87
YBX1-202ENST00000332220 FANCAO15360 1455 aa32.99■■■□□ 2.87
YBX1-202ENST00000332220 NEO1Q92859 1461 aa32.99■■■□□ 2.87
YBX1-202ENST00000332220 COL17A1Q9UMD9 1497 aaPredicted RBP32.99■■■□□ 2.87
YBX1-202ENST00000332220 KANK4Q5T7N3 995 aaPredicted RBP32.95■■■□□ 2.87
YBX1-202ENST00000332220 ARHGAP5Q13017 1502 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms