RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 SHROOM2Q13796 1616 aa42.74■■■■■ 4.43
SMDT1-201ENST00000331479 EHMT2Q96KQ7 1210 aa42.73■■■■■ 4.43
SMDT1-201ENST00000331479 JPH4Q96JJ6 628 aa42.73■■■■■ 4.43
SMDT1-201ENST00000331479 ARHGEF11O15085 1522 aa42.72■■■■■ 4.43
SMDT1-201ENST00000331479 IQGAP2Q13576 1575 aa42.69■■■■■ 4.43
SMDT1-201ENST00000331479 CTTNBP2Q8WZ74 1663 aa42.69■■■■■ 4.42
SMDT1-201ENST00000331479 RIMBP3CA6NJZ7 1639 aa42.68■■■■■ 4.42
SMDT1-201ENST00000331479 RIMBP3BA6NNM3 1639 aa42.68■■■■■ 4.42
SMDT1-201ENST00000331479 RIMBP3Q9UFD9 1639 aa42.68■■■■■ 4.42
SMDT1-201ENST00000331479 GOLGA3Q08378 1498 aa42.64■■■■■ 4.42
SMDT1-201ENST00000331479 ERCC6L2Q5T890 1561 aa42.62■■■■■ 4.41
SMDT1-201ENST00000331479 PRG4Q92954 1404 aaPredicted RBP42.59■■■■■ 4.41
SMDT1-201ENST00000331479 UBTFP17480 764 aaKnown RBP42.52■■■■■ 4.4
SMDT1-201ENST00000331479 UGGT2Q9NYU1 1516 aa42.48■■■■■ 4.39
SMDT1-201ENST00000331479 ARAP1Q96P48 1450 aa42.44■■■■■ 4.38
SMDT1-201ENST00000331479 DISP1Q96F81 1524 aa42.4■■■■■ 4.38
SMDT1-201ENST00000331479 CARMIL2Q6F5E8 1435 aa42.34■■■■■ 4.37
SMDT1-201ENST00000331479 CYB5RLQ6IPT4 315 aa42.34■■■■■ 4.37
SMDT1-201ENST00000331479 RANGAP1P46060 587 aaPredicted RBP42.31■■■■■ 4.36
SMDT1-201ENST00000331479 KIAA0556O60303 1618 aa42.29■■■■■ 4.36
SMDT1-201ENST00000331479 LOC105371045A0A1W2PR82 267 aa42.27■■■■■ 4.36
SMDT1-201ENST00000331479 TNIKQ9UKE5 1360 aa42.2■■■■■ 4.35
SMDT1-201ENST00000331479 SAMD9Q5K651 1589 aa42.19■■■■■ 4.34
SMDT1-201ENST00000331479 TTBK1Q5TCY1 1321 aaPredicted RBP42.17■■■■■ 4.34
SMDT1-201ENST00000331479 P3H3Q8IVL6 736 aa42.16■■■■■ 4.34
SMDT1-201ENST00000331479 PTPRGP23470 1445 aa42.14■■■■■ 4.34
SMDT1-201ENST00000331479 EFCAB5A4FU69 1503 aa42.06■■■■■ 4.32
SMDT1-201ENST00000331479 ARHGAP35Q9NRY4 1499 aa42.01■■■■■ 4.32
SMDT1-201ENST00000331479 FHOD3Q2V2M9 1422 aa42■■■■■ 4.31
SMDT1-201ENST00000331479 CLIP1P30622 1438 aa41.91■■■■■ 4.3
SMDT1-201ENST00000331479 ADCY10Q96PN6 1610 aa41.89■■■■■ 4.3
SMDT1-201ENST00000331479 UACAQ9BZF9 1416 aa41.87■■■■■ 4.29
SMDT1-201ENST00000331479 PLB1Q6P1J6 1458 aa41.87■■■■■ 4.29
SMDT1-201ENST00000331479 CEP162Q5TB80 1403 aa41.87■■■■■ 4.29
SMDT1-201ENST00000331479 ABCA8O94911 1581 aa41.8■■■■■ 4.28
SMDT1-201ENST00000331479 ABCC2Q92887 1545 aa41.79■■■■■ 4.28
SMDT1-201ENST00000331479 UHRF1BP1LA0JNW5 1464 aa41.78■■■■■ 4.28
SMDT1-201ENST00000331479 RAPGEF6Q8TEU7 1601 aa41.67■■■■■ 4.26
SMDT1-201ENST00000331479 FMN1Q68DA7 1419 aa41.67■■■■■ 4.26
SMDT1-201ENST00000331479 NPM1P06748 294 aaKnown RBP eCLIP41.63■■■■■ 4.26
SMDT1-201ENST00000331479 KDM5BQ9UGL1 1544 aa41.6■■■■■ 4.25
SMDT1-201ENST00000331479 ARID3CA6NKF2 412 aa41.55■■■■■ 4.24
SMDT1-201ENST00000331479 NUP153P49790 1475 aaKnown RBP41.55■■■■■ 4.24
SMDT1-201ENST00000331479 ZCCHC11Q5TAX3 1644 aaKnown RBP41.55■■■■■ 4.24
SMDT1-201ENST00000331479 ATP10BO94823 1461 aa41.48■■■■■ 4.23
SMDT1-201ENST00000331479 MAPKBP1O60336 1514 aa41.47■■■■■ 4.23
SMDT1-201ENST00000331479 PCF11O94913 1555 aaKnown RBP41.46■■■■■ 4.23
SMDT1-201ENST00000331479 ATP1B4Q9UN42 357 aaPredicted RBP41.46■■■■■ 4.23
SMDT1-201ENST00000331479 CASKIN1Q8WXD9 1431 aa41.43■■■■■ 4.22
SMDT1-201ENST00000331479 HECW1Q76N89 1606 aa41.42■■■■■ 4.22
SMDT1-201ENST00000331479 ASXL2Q76L83 1435 aa41.39■■■■■ 4.22
SMDT1-201ENST00000331479 FYCO1Q9BQS8 1478 aa41.35■■■■■ 4.21
SMDT1-201ENST00000331479 CDK13Q14004 1512 aaKnown RBP41.34■■■■■ 4.21
SMDT1-201ENST00000331479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.33■■■■■ 4.21
SMDT1-201ENST00000331479 HNRNPUL2Q1KMD3 747 aaKnown RBP41.33■■■■■ 4.21
SMDT1-201ENST00000331479 EPRSP07814 1512 aaKnown RBP41.33■■■■■ 4.21
SMDT1-201ENST00000331479 LRRIQ1Q96JM4 1722 aa41.33■■■■■ 4.21
SMDT1-201ENST00000331479 VPS8Q8N3P4 1428 aa41.31■■■■■ 4.2
SMDT1-201ENST00000331479 TRHP20396 242 aaPredicted RBP41.27■■■■■ 4.2
SMDT1-201ENST00000331479 WDR7Q9Y4E6 1490 aa41.25■■■■■ 4.19
SMDT1-201ENST00000331479 ABCC10Q5T3U5 1492 aa41.23■■■■■ 4.19
SMDT1-201ENST00000331479 DIP2BQ9P265 1576 aa41.19■■■■■ 4.19
SMDT1-201ENST00000331479 CCDC18Q5T9S5 1454 aa41.17■■■■■ 4.18
SMDT1-201ENST00000331479 KIF13AQ9H1H9 1805 aa41.16■■■■■ 4.18
SMDT1-201ENST00000331479 FAM69CQ0P6D2 419 aa41.15■■■■■ 4.18
SMDT1-201ENST00000331479 PLEKHD1A6NEE1 506 aa41.13■■■■■ 4.18
SMDT1-201ENST00000331479 KCNH8Q96L42 1107 aa41.13■■■■■ 4.18
SMDT1-201ENST00000331479 CDK11AQ9UQ88 783 aaPredicted RBP41.05■■■■■ 4.16
SMDT1-201ENST00000331479 GLI2P10070 1586 aa41.04■■■■■ 4.16
SMDT1-201ENST00000331479 MAGI3Q5TCQ9 1506 aa41.01■■■■■ 4.16
SMDT1-201ENST00000331479 TROQ12816 1431 aaPredicted RBP40.97■■■■■ 4.15
SMDT1-201ENST00000331479 CFAP43Q8NDM7 1665 aa40.93■■■■■ 4.14
SMDT1-201ENST00000331479 TIAM1Q13009 1591 aa40.93■■■■■ 4.14
SMDT1-201ENST00000331479 MAP3K4Q9Y6R4 1608 aa40.9■■■■■ 4.14
SMDT1-201ENST00000331479 KIF14Q15058 1648 aa40.87■■■■■ 4.13
SMDT1-201ENST00000331479 ABCA9Q8IUA7 1624 aa40.87■■■■■ 4.13
SMDT1-201ENST00000331479 TSPOAP1O95153 1857 aa40.86■■■■■ 4.13
SMDT1-201ENST00000331479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.85■■■■■ 4.132e-11■□□□□ 11
SMDT1-201ENST00000331479 MAP3K1Q13233 1512 aa40.85■■■■■ 4.13
SMDT1-201ENST00000331479 MTUS2Q5JR59 1369 aa40.84■■■■■ 4.13
SMDT1-201ENST00000331479 CD109Q6YHK3 1445 aa40.82■■■■■ 4.13
SMDT1-201ENST00000331479 TTC37Q6PGP7 1564 aa40.81■■■■■ 4.12
SMDT1-201ENST00000331479 APLP2Q06481 763 aa40.78■■■■■ 4.12
SMDT1-201ENST00000331479 PPRC1Q5VV67 1664 aaKnown RBP40.78■■■■■ 4.12
SMDT1-201ENST00000331479 KANK4Q5T7N3 995 aaPredicted RBP40.77■■■■■ 4.12
SMDT1-201ENST00000331479 EHBP1L1Q8N3D4 1523 aa40.76■■■■■ 4.12
SMDT1-201ENST00000331479 LRRC9Q6ZRR7 1453 aa40.75■■■■■ 4.11
SMDT1-201ENST00000331479 TEX14Q8IWB6 1497 aa40.61■■■■■ 4.09
SMDT1-201ENST00000331479 MYO5CQ9NQX4 1742 aa40.6■■■■■ 4.09
SMDT1-201ENST00000331479 PLCH2O75038 1416 aa40.59■■■■■ 4.09
SMDT1-201ENST00000331479 SUPT6HQ7KZ85 1726 aaKnown RBP40.59■■■■■ 4.09
SMDT1-201ENST00000331479 NCOA2Q15596 1464 aa40.57■■■■■ 4.08
SMDT1-201ENST00000331479 CDC42BPAQ5VT25 1732 aa40.53■■■■■ 4.08
SMDT1-201ENST00000331479 GPATCH8Q9UKJ3 1502 aaKnown RBP40.51■■■■■ 4.08
SMDT1-201ENST00000331479 CDC42BPBQ9Y5S2 1711 aa40.5■■■■■ 4.07
SMDT1-201ENST00000331479 PREX2Q70Z35 1606 aa40.5■■■■■ 4.07
SMDT1-201ENST00000331479 CCNB3Q8WWL7 1395 aa40.5■■■■■ 4.07
SMDT1-201ENST00000331479 FANCAO15360 1455 aa40.5■■■■■ 4.07
SMDT1-201ENST00000331479 ARAP3Q8WWN8 1544 aa40.49■■■■■ 4.07
SMDT1-201ENST00000331479 ARHGAP5Q13017 1502 aa40.46■■■■■ 4.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms