RNA–Protein interactions for RNA: ENST00000331040.9

NRXN1-201, Transcript of neurexin 1, humanhuman

TSL 2

Gene NRXN1, Length 3,044 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-201ENST00000331040 MKRN4PQ13434 485 aaPredicted RBP8.24□□□□□ -1.09
NRXN1-201ENST00000331040 ANO8Q9HCE9 1232 aaPredicted RBP8.23□□□□□ -1.09
NRXN1-201ENST00000331040 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
NRXN1-201ENST00000331040 ACIN1Q9UKV3 1341 aaKnown RBP8.22□□□□□ -1.09
NRXN1-201ENST00000331040 VASPP50552 380 aaPredicted RBP8.22□□□□□ -1.09
NRXN1-201ENST00000331040 IFNLR1Q8IU57 520 aaPredicted RBP8.22□□□□□ -1.09
NRXN1-201ENST00000331040 FBXO3Q9UK99 471 aa8.2□□□□□ -1.1
NRXN1-201ENST00000331040 RAPGEF2Q9Y4G8 1499 aa8.19□□□□□ -1.1
NRXN1-201ENST00000331040 PROM2Q8N271 834 aa8.19□□□□□ -1.1
NRXN1-201ENST00000331040 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
NRXN1-201ENST00000331040 TNIKQ9UKE5 1360 aa8.18□□□□□ -1.1
NRXN1-201ENST00000331040 PKD2Q13563 968 aa8.17□□□□□ -1.1
NRXN1-201ENST00000331040 GOLGA3Q08378 1498 aa8.16□□□□□ -1.1
NRXN1-201ENST00000331040 PEG3Q9GZU2 1588 aa8.15□□□□□ -1.1
NRXN1-201ENST00000331040 P3H3Q8IVL6 736 aa8.15□□□□□ -1.1
NRXN1-201ENST00000331040 ITGAEP38570 1179 aa8.15□□□□□ -1.11
NRXN1-201ENST00000331040 NEUROD1Q13562 356 aa8.15□□□□□ -1.11
NRXN1-201ENST00000331040 CLIP1P30622 1438 aa8.15□□□□□ -1.11
NRXN1-201ENST00000331040 ZEB1P37275 1124 aaPredicted RBP8.13□□□□□ -1.11
NRXN1-201ENST00000331040 TAOK2Q9UL54 1235 aa8.13□□□□□ -1.11
NRXN1-201ENST00000331040 ATP1B4Q9UN42 357 aaPredicted RBP8.13□□□□□ -1.11
NRXN1-201ENST00000331040 BCANQ96GW7 911 aa8.12□□□□□ -1.11
NRXN1-201ENST00000331040 KANK4Q5T7N3 995 aaPredicted RBP8.11□□□□□ -1.11
NRXN1-201ENST00000331040 KLHL34Q8N239 644 aa8.11□□□□□ -1.11
NRXN1-201ENST00000331040 PKNOX2Q96KN3 472 aa8.11□□□□□ -1.11
NRXN1-201ENST00000331040 CEP164Q9UPV0 1460 aa8.1□□□□□ -1.11
NRXN1-201ENST00000331040 CUX1P39880 1505 aa8.1□□□□□ -1.11
NRXN1-201ENST00000331040 FBLN2P98095 1184 aa8.1□□□□□ -1.11
NRXN1-201ENST00000331040 KDM2AQ9Y2K7 1162 aa8.09□□□□□ -1.11
NRXN1-201ENST00000331040 EEA1Q15075 1411 aa8.09□□□□□ -1.11
NRXN1-201ENST00000331040 NCAPD3P42695 1498 aa8.08□□□□□ -1.12
NRXN1-201ENST00000331040 NESP48681 1621 aa8.07□□□□□ -1.12
NRXN1-201ENST00000331040 TOP2BQ02880 1626 aa8.05□□□□□ -1.12
NRXN1-201ENST00000331040 NPM1P06748 294 aaKnown RBP eCLIP8.05□□□□□ -1.12
NRXN1-201ENST00000331040 TPRNQ4KMQ1 711 aa8.05□□□□□ -1.12
NRXN1-201ENST00000331040 ARXQ96QS3 562 aa8.05□□□□□ -1.12
NRXN1-201ENST00000331040 CUX2O14529 1486 aa8.04□□□□□ -1.12
NRXN1-201ENST00000331040 KIF21BO75037 1637 aa8.03□□□□□ -1.12
NRXN1-201ENST00000331040 CC2D2AQ9P2K1 1620 aa8.03□□□□□ -1.12
NRXN1-201ENST00000331040 VSIG10Q8N0Z9 540 aa8.03□□□□□ -1.12
NRXN1-201ENST00000331040 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
NRXN1-201ENST00000331040 SPINK5Q9NQ38 1064 aaPredicted RBP8.03□□□□□ -1.12
NRXN1-201ENST00000331040 VPS8Q8N3P4 1428 aa8.03□□□□□ -1.12
NRXN1-201ENST00000331040 CFTRP13569 1480 aa8.03□□□□□ -1.12
NRXN1-201ENST00000331040 RAD54L2Q9Y4B4 1467 aa8.02□□□□□ -1.13
NRXN1-201ENST00000331040 ARID3CA6NKF2 412 aa8.02□□□□□ -1.13
NRXN1-201ENST00000331040 TRHP20396 242 aaPredicted RBP8.02□□□□□ -1.13
NRXN1-201ENST00000331040 CADPSQ9ULU8 1353 aa8.02□□□□□ -1.13
NRXN1-201ENST00000331040 ARAP1Q96P48 1450 aa8.02□□□□□ -1.13
NRXN1-201ENST00000331040 DIEXFQ68CQ4 756 aaKnown RBP8.01□□□□□ -1.13
NRXN1-201ENST00000331040 KIF27Q86VH2 1401 aa8.01□□□□□ -1.13
NRXN1-201ENST00000331040 HMGXB3Q12766 1538 aa8.01□□□□□ -1.13
NRXN1-201ENST00000331040 PAXIP1Q6ZW49 1069 aaPredicted RBP8□□□□□ -1.13
NRXN1-201ENST00000331040 POLA2Q14181 598 aa8□□□□□ -1.13
NRXN1-201ENST00000331040 CFAP44Q96MT7 982 aa8□□□□□ -1.13
NRXN1-201ENST00000331040 TIMELESSQ9UNS1 1208 aa7.99□□□□□ -1.13
NRXN1-201ENST00000331040 SALL2Q9Y467 1007 aaPredicted RBP7.99□□□□□ -1.13
NRXN1-201ENST00000331040 PRXQ9BXM0 1461 aa7.99□□□□□ -1.13
NRXN1-201ENST00000331040 IGF1RP08069 1367 aa7.99□□□□□ -1.13
NRXN1-201ENST00000331040 FGD5Q6ZNL6 1462 aa7.99□□□□□ -1.13
NRXN1-201ENST00000331040 BIVM-ERCC5R4GMW8 1640 aa7.97□□□□□ -1.13
NRXN1-201ENST00000331040 CCDC136Q96JN2 1154 aa7.97□□□□□ -1.13
NRXN1-201ENST00000331040 TDRD9Q8NDG6 1382 aaKnown RBP7.97□□□□□ -1.13
NRXN1-201ENST00000331040 FANCD2Q9BXW9 1451 aa7.96□□□□□ -1.13
NRXN1-201ENST00000331040 CARMIL1Q5VZK9 1371 aa7.96□□□□□ -1.13
NRXN1-201ENST00000331040 FAM50AQ14320 339 aaKnown RBP7.96□□□□□ -1.14
NRXN1-201ENST00000331040 ECM2O94769 699 aaPredicted RBP7.95□□□□□ -1.14
NRXN1-201ENST00000331040 PDIA4P13667 645 aaKnown RBP7.95□□□□□ -1.14
NRXN1-201ENST00000331040 ARHGAP35Q9NRY4 1499 aa7.95□□□□□ -1.14
NRXN1-201ENST00000331040 RGL2O15211 777 aa7.95□□□□□ -1.14
NRXN1-201ENST00000331040 TSHZ2Q9NRE2 1034 aa7.93□□□□□ -1.14
NRXN1-201ENST00000331040 ZNF316A6NFI3 1004 aaPredicted RBP7.92□□□□□ -1.14
NRXN1-201ENST00000331040 MIER1Q8N108 512 aa7.92□□□□□ -1.14
NRXN1-201ENST00000331040 BBXQ8WY36 941 aaPredicted RBP7.92□□□□□ -1.14
NRXN1-201ENST00000331040 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.92□□□□□ -1.14
NRXN1-201ENST00000331040 FHOD3Q2V2M9 1422 aa7.92□□□□□ -1.14
NRXN1-201ENST00000331040 PDE4CQ08493 712 aa7.92□□□□□ -1.14
NRXN1-201ENST00000331040 NEFLP07196 543 aa7.9□□□□□ -1.14
NRXN1-201ENST00000331040 HIRIP3Q9BW71 556 aaPredicted RBP7.9□□□□□ -1.14
NRXN1-201ENST00000331040 SPOCK2Q92563 424 aa7.89□□□□□ -1.15
NRXN1-201ENST00000331040 POLA1P09884 1462 aaPredicted RBP7.89□□□□□ -1.15
NRXN1-201ENST00000331040 ERICH3Q5RHP9 1530 aa7.88□□□□□ -1.15
NRXN1-201ENST00000331040 SIN3AQ96ST3 1273 aa7.88□□□□□ -1.15
NRXN1-201ENST00000331040 TOPBP1Q92547 1522 aa7.88□□□□□ -1.15
NRXN1-201ENST00000331040 CAPN15O75808 1086 aa7.87□□□□□ -1.15
NRXN1-201ENST00000331040 ABCB7O75027 752 aa7.87□□□□□ -1.15
NRXN1-201ENST00000331040 DHX57Q6P158 1386 aaKnown RBP7.86□□□□□ -1.15
NRXN1-201ENST00000331040 PHLDB1Q86UU1 1377 aa7.86□□□□□ -1.15
NRXN1-201ENST00000331040 URB2Q14146 1524 aaKnown RBP7.86□□□□□ -1.15
NRXN1-201ENST00000331040 CCNB3Q8WWL7 1395 aa7.86□□□□□ -1.15
NRXN1-201ENST00000331040 ERICH6BQ5W0A0 696 aa7.84□□□□□ -1.15
NRXN1-201ENST00000331040 CHIC2Q9UKJ5 165 aa7.84□□□□□ -1.16
NRXN1-201ENST00000331040 AQRO60306 1485 aaKnown RBP eCLIP7.83□□□□□ -1.16
NRXN1-201ENST00000331040 RAB3GAP2Q9H2M9 1393 aa7.82□□□□□ -1.16
NRXN1-201ENST00000331040 SPRYD3Q8NCJ5 442 aa7.82□□□□□ -1.16
NRXN1-201ENST00000331040 FGD1P98174 961 aa7.81□□□□□ -1.16
NRXN1-201ENST00000331040 CHGAP10645 457 aaKnown RBP7.81□□□□□ -1.16
NRXN1-201ENST00000331040 ZBTB12Q9Y330 459 aaPredicted RBP7.81□□□□□ -1.16
NRXN1-201ENST00000331040 KCNH8Q96L42 1107 aa7.81□□□□□ -1.16
NRXN1-201ENST00000331040 BCL11BQ9C0K0 894 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms