RNA–Protein interactions for RNA: ENST00000331040.9

NRXN1-201, Transcript of neurexin 1, humanhuman

TSL 2

Gene NRXN1, Length 3,044 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-201ENST00000331040 CHIC1Q5VXU3 224 aa13.13□□□□□ -0.31
NRXN1-201ENST00000331040 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.33
NRXN1-201ENST00000331040 PHF23Q9BUL5 403 aaPredicted RBP11.74□□□□□ -0.53
NRXN1-201ENST00000331040 NISCHQ9Y2I1 1504 aa11.09□□□□□ -0.63
NRXN1-201ENST00000331040 PLPPR3Q6T4P5 718 aa10.87□□□□□ -0.67
NRXN1-201ENST00000331040 SENP3Q9H4L4 574 aaPredicted RBP10.74□□□□□ -0.69
NRXN1-201ENST00000331040 ADRA2BP18089 450 aa10.41□□□□□ -0.74
NRXN1-201ENST00000331040 EHMT2Q96KQ7 1210 aa10.36□□□□□ -0.75
NRXN1-201ENST00000331040 KCNA4P22459 653 aa10.28□□□□□ -0.76
NRXN1-201ENST00000331040 PPP6R1Q9UPN7 881 aa10.22□□□□□ -0.77
NRXN1-201ENST00000331040 FOXD1Q16676 465 aa10.04□□□□□ -0.8
NRXN1-201ENST00000331040 CSRNP3Q8WYN3 585 aa9.89□□□□□ -0.83
NRXN1-201ENST00000331040 SHROOM4Q9ULL8 1493 aa9.82□□□□□ -0.84
NRXN1-201ENST00000331040 SLC4A1APQ9BWU0 796 aaKnown RBP9.8□□□□□ -0.84
NRXN1-201ENST00000331040 PELP1Q8IZL8 1130 aaKnown RBP9.75□□□□□ -0.85
NRXN1-201ENST00000331040 PPP4R3CPQ6ZMV5 832 aa9.72□□□□□ -0.85
NRXN1-201ENST00000331040 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
NRXN1-201ENST00000331040 MYT1Q01538 1121 aa9.65□□□□□ -0.86
NRXN1-201ENST00000331040 PIAS4Q8N2W9 510 aaPredicted RBP9.59□□□□□ -0.87
NRXN1-201ENST00000331040 SUPT5HO00267 1087 aaKnown RBP9.56□□□□□ -0.88
NRXN1-201ENST00000331040 NPM3O75607 178 aaKnown RBP9.54□□□□□ -0.88
NRXN1-201ENST00000331040 ZBTB22O15209 634 aa9.53□□□□□ -0.88
NRXN1-201ENST00000331040 NCBP3Q53F19 620 aaKnown RBP9.48□□□□□ -0.89
NRXN1-201ENST00000331040 TTBK1Q5TCY1 1321 aaPredicted RBP9.37□□□□□ -0.91
NRXN1-201ENST00000331040 ZCCHC6Q5VYS8 1495 aaKnown RBP9.32□□□□□ -0.92
NRXN1-201ENST00000331040 PRKCSHP14314 528 aaPredicted RBP9.32□□□□□ -0.92
NRXN1-201ENST00000331040 DNAJC5BQ9UF47 199 aa9.31□□□□□ -0.92
NRXN1-201ENST00000331040 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
NRXN1-201ENST00000331040 CCDC180Q9P1Z9 1646 aa9.27□□□□□ -0.93
NRXN1-201ENST00000331040 CNKSR2Q8WXI2 1034 aa9.24□□□□□ -0.93
NRXN1-201ENST00000331040 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
NRXN1-201ENST00000331040 FOXD4L1Q9NU39 408 aa9.15□□□□□ -0.94
NRXN1-201ENST00000331040 MAPK8IP2Q13387 824 aaPredicted RBP9.13□□□□□ -0.95
NRXN1-201ENST00000331040 APLP2Q06481 763 aa9.11□□□□□ -0.95
NRXN1-201ENST00000331040 ABCC9O60706 1549 aa9.09□□□□□ -0.95
NRXN1-201ENST00000331040 SCAF1Q9H7N4 1312 aaKnown RBP9.09□□□□□ -0.95
NRXN1-201ENST00000331040 MYO15BQ96JP2 1530 aa9.06□□□□□ -0.96
NRXN1-201ENST00000331040 ERICH6Q7L0X2 663 aa9.04□□□□□ -0.96
NRXN1-201ENST00000331040 SCRIBQ14160 1630 aa9.01□□□□□ -0.97
NRXN1-201ENST00000331040 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
NRXN1-201ENST00000331040 LOC105371045A0A1W2PR82 267 aa8.99□□□□□ -0.97
NRXN1-201ENST00000331040 FAM9AQ8IZU1 332 aaPredicted RBP8.92□□□□□ -0.98
NRXN1-201ENST00000331040 SLC4A2P04920 1241 aa8.9□□□□□ -0.98
NRXN1-201ENST00000331040 RNF216Q9NWF9 866 aaPredicted RBP8.9□□□□□ -0.98
NRXN1-201ENST00000331040 MSH5O43196 834 aa8.89□□□□□ -0.99
NRXN1-201ENST00000331040 FKBP8Q14318 412 aa8.89□□□□□ -0.99
NRXN1-201ENST00000331040 BCL11AQ9H165 835 aa8.89□□□□□ -0.99
NRXN1-201ENST00000331040 DCAF1Q9Y4B6 1507 aa8.89□□□□□ -0.99
NRXN1-201ENST00000331040 PCGF6Q9BYE7 350 aa8.85□□□□□ -0.99
NRXN1-201ENST00000331040 CECR2Q9BXF3 1484 aa8.83□□□□□ -1
NRXN1-201ENST00000331040 DAXXQ9UER7 740 aaPredicted RBP8.83□□□□□ -1
NRXN1-201ENST00000331040 RSF1Q96T23 1441 aaPredicted RBP8.82□□□□□ -1
NRXN1-201ENST00000331040 PABPN1Q86U42 306 aaKnown RBP eCLIP8.81□□□□□ -1
NRXN1-201ENST00000331040 ATXN8OSP0DMR3 200 aa8.79□□□□□ -1
NRXN1-201ENST00000331040 TRIM41Q8WV44 630 aa8.77□□□□□ -1.01
NRXN1-201ENST00000331040 RB1CC1Q8TDY2 1594 aa8.76□□□□□ -1.01
NRXN1-201ENST00000331040 PPARGC1BQ86YN6 1023 aaKnown RBP8.74□□□□□ -1.01
NRXN1-201ENST00000331040 HOXD11P31277 338 aaPredicted RBP8.73□□□□□ -1.01
NRXN1-201ENST00000331040 MROH2BQ7Z745 1585 aa8.72□□□□□ -1.01
NRXN1-201ENST00000331040 HRCP23327 699 aa8.69□□□□□ -1.02
NRXN1-201ENST00000331040 DMRT2Q9Y5R5 561 aa8.69□□□□□ -1.02
NRXN1-201ENST00000331040 MYCNP04198 464 aaPredicted RBP8.69□□□□□ -1.02
NRXN1-201ENST00000331040 WIZO95785 1651 aa8.67□□□□□ -1.02
NRXN1-201ENST00000331040 NACADO15069 1562 aa8.67□□□□□ -1.02
NRXN1-201ENST00000331040 ATF5Q9Y2D1 282 aaPredicted RBP8.63□□□□□ -1.03
NRXN1-201ENST00000331040 EIF5BO60841 1220 aaKnown RBP8.56□□□□□ -1.04
NRXN1-201ENST00000331040 ABCC8Q09428 1581 aa8.53□□□□□ -1.04
NRXN1-201ENST00000331040 RANGAP1P46060 587 aaPredicted RBP8.53□□□□□ -1.04
NRXN1-201ENST00000331040 UNC13AQ9UPW8 1703 aa8.51□□□□□ -1.05
NRXN1-201ENST00000331040 TRIM26Q12899 539 aaPredicted RBP8.49□□□□□ -1.05
NRXN1-201ENST00000331040 CCDC88BA6NC98 1476 aa8.49□□□□□ -1.05
NRXN1-201ENST00000331040 BAZ1AQ9NRL2 1556 aaPredicted RBP8.48□□□□□ -1.05
NRXN1-201ENST00000331040 SMARCA4P51532 1647 aa8.45□□□□□ -1.06
NRXN1-201ENST00000331040 SOGA1O94964 1423 aa8.44□□□□□ -1.06
NRXN1-201ENST00000331040 BICRAQ9NZM4 1560 aa8.44□□□□□ -1.06
NRXN1-201ENST00000331040 RUSC2Q8N2Y8 1516 aa8.44□□□□□ -1.06
NRXN1-201ENST00000331040 CENPBP07199 599 aaPredicted RBP8.43□□□□□ -1.06
NRXN1-201ENST00000331040 PLEKHG5O94827 1062 aa8.43□□□□□ -1.06
NRXN1-201ENST00000331040 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
NRXN1-201ENST00000331040 DCAF8L1A6NGE4 600 aa8.41□□□□□ -1.06
NRXN1-201ENST00000331040 SMARCA2P51531 1590 aa8.4□□□□□ -1.06
NRXN1-201ENST00000331040 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.07
NRXN1-201ENST00000331040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.39□□□□□ -1.07
NRXN1-201ENST00000331040 PLCB2Q00722 1185 aa8.36□□□□□ -1.07
NRXN1-201ENST00000331040 U3KPZ7 1027 aaPredicted RBP8.36□□□□□ -1.07
NRXN1-201ENST00000331040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.36□□□□□ -1.07
NRXN1-201ENST00000331040 EIF4G1Q04637 1599 aaKnown RBP8.35□□□□□ -1.07
NRXN1-201ENST00000331040 HNRNPUL2Q1KMD3 747 aaKnown RBP8.31□□□□□ -1.08
NRXN1-201ENST00000331040 ATAD2BQ9ULI0 1458 aa8.31□□□□□ -1.08
NRXN1-201ENST00000331040 BAZ1BQ9UIG0 1483 aaKnown RBP8.3□□□□□ -1.08
NRXN1-201ENST00000331040 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
NRXN1-201ENST00000331040 HAP1P54257 671 aaPredicted RBP8.28□□□□□ -1.08
NRXN1-201ENST00000331040 SAMD1Q6SPF0 538 aaPredicted RBP8.28□□□□□ -1.08
NRXN1-201ENST00000331040 UBE2Q2Q8WVN8 375 aa8.28□□□□□ -1.08
NRXN1-201ENST00000331040 CEP162Q5TB80 1403 aa8.28□□□□□ -1.08
NRXN1-201ENST00000331040 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
NRXN1-201ENST00000331040 ANP32EQ9BTT0 268 aa8.27□□□□□ -1.09
NRXN1-201ENST00000331040 SYNJ1O43426 1573 aa8.26□□□□□ -1.09
NRXN1-201ENST00000331040 ZNF219Q9P2Y4 722 aaPredicted RBP8.25□□□□□ -1.09
NRXN1-201ENST00000331040 SPDYE4A6NLX3 237 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms