RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 CUX2O14529 1486 aa25.65■■□□□ 1.7
SOCS3-201ENST00000330871 CCNB3Q8WWL7 1395 aa25.6■■□□□ 1.69
SOCS3-201ENST00000330871 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
SOCS3-201ENST00000330871 HIRIP3Q9BW71 556 aaPredicted RBP25.57■■□□□ 1.68
SOCS3-201ENST00000330871 MYT1LQ9UL68 1186 aa25.57■■□□□ 1.68
SOCS3-201ENST00000330871 PPP1R15AO75807 674 aaPredicted RBP25.51■■□□□ 1.67
SOCS3-201ENST00000330871 NBR1Q14596 966 aa25.51■■□□□ 1.67
SOCS3-201ENST00000330871 CUX1P39880 1505 aa25.51■■□□□ 1.67
SOCS3-201ENST00000330871 ARHGAP35Q9NRY4 1499 aa25.5■■□□□ 1.67
SOCS3-201ENST00000330871 ANP32CO43423 234 aa25.48■■□□□ 1.67
SOCS3-201ENST00000330871 SALL2Q9Y467 1007 aaPredicted RBP25.47■■□□□ 1.67
SOCS3-201ENST00000330871 CCER2I3L3R5 266 aa25.46■■□□□ 1.67
SOCS3-201ENST00000330871 RAB3GAP2Q9H2M9 1393 aa25.42■■□□□ 1.66
SOCS3-201ENST00000330871 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
SOCS3-201ENST00000330871 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
SOCS3-201ENST00000330871 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
SOCS3-201ENST00000330871 SIN3AQ96ST3 1273 aa25.4■■□□□ 1.66
SOCS3-201ENST00000330871 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
SOCS3-201ENST00000330871 CCDC136Q96JN2 1154 aa25.36■■□□□ 1.65
SOCS3-201ENST00000330871 HNRNPUQ00839 825 aaKnown RBP eCLIP25.35■■□□□ 1.65
SOCS3-201ENST00000330871 MAP3K1Q13233 1512 aa25.35■■□□□ 1.65
SOCS3-201ENST00000330871 PAK3O75914 559 aaPredicted RBP25.34■■□□□ 1.65
SOCS3-201ENST00000330871 CFTRP13569 1480 aa25.33■■□□□ 1.65
SOCS3-201ENST00000330871 NOP58Q9Y2X3 529 aaKnown RBP25.33■■□□□ 1.64
SOCS3-201ENST00000330871 SETD5Q9C0A6 1442 aa25.32■■□□□ 1.64
SOCS3-201ENST00000330871 TIAM1Q13009 1591 aa25.3■■□□□ 1.64
SOCS3-201ENST00000330871 IGF1RP08069 1367 aa25.26■■□□□ 1.63
SOCS3-201ENST00000330871 B4GALNT3Q6L9W6 998 aa25.25■■□□□ 1.63
SOCS3-201ENST00000330871 RTN4Q9NQC3 1192 aaKnown RBP25.25■■□□□ 1.63
SOCS3-201ENST00000330871 IL27Q8NEV9 243 aa25.24■■□□□ 1.63
SOCS3-201ENST00000330871 PPP4R2Q9NY27 417 aa25.24■■□□□ 1.63
SOCS3-201ENST00000330871 LRRC9Q6ZRR7 1453 aa25.23■■□□□ 1.63
SOCS3-201ENST00000330871 TIMELESSQ9UNS1 1208 aa25.22■■□□□ 1.63
SOCS3-201ENST00000330871 ERICH6BQ5W0A0 696 aa25.21■■□□□ 1.63
SOCS3-201ENST00000330871 PHLDB1Q86UU1 1377 aa25.19■■□□□ 1.62
SOCS3-201ENST00000330871 CARMIL1Q5VZK9 1371 aa25.17■■□□□ 1.62
SOCS3-201ENST00000330871 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.17■■□□□ 1.62
SOCS3-201ENST00000330871 FAM50AQ14320 339 aaKnown RBP25.16■■□□□ 1.62
SOCS3-201ENST00000330871 FHAD1B1AJZ9 1412 aa25.14■■□□□ 1.62
SOCS3-201ENST00000330871 RTL5Q5HYW3 569 aaPredicted RBP25.12■■□□□ 1.61
SOCS3-201ENST00000330871 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
SOCS3-201ENST00000330871 CFAP43Q8NDM7 1665 aa25.03■■□□□ 1.6
SOCS3-201ENST00000330871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.01■■□□□ 1.59
SOCS3-201ENST00000330871 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
SOCS3-201ENST00000330871 ATP1B4Q9UN42 357 aaPredicted RBP24.99■■□□□ 1.59
SOCS3-201ENST00000330871 PCF11O94913 1555 aaKnown RBP24.98■■□□□ 1.59
SOCS3-201ENST00000330871 P3H3Q8IVL6 736 aa24.98■■□□□ 1.59
SOCS3-201ENST00000330871 CADPSQ9ULU8 1353 aa24.98■■□□□ 1.59
SOCS3-201ENST00000330871 IPO9Q96P70 1041 aaKnown RBP24.98■■□□□ 1.59
SOCS3-201ENST00000330871 ANP32AP39687 249 aaKnown RBP24.96■■□□□ 1.59
SOCS3-201ENST00000330871 ZBTB47Q9UFB7 747 aaPredicted RBP24.96■■□□□ 1.59
SOCS3-201ENST00000330871 CCDC184Q52MB2 194 aa24.95■■□□□ 1.58
SOCS3-201ENST00000330871 UBE2Q2Q8WVN8 375 aa24.91■■□□□ 1.58
SOCS3-201ENST00000330871 FYCO1Q9BQS8 1478 aa24.91■■□□□ 1.58
SOCS3-201ENST00000330871 CASKIN1Q8WXD9 1431 aa24.89■■□□□ 1.57
SOCS3-201ENST00000330871 FAM9BQ8IZU0 186 aa24.89■■□□□ 1.57
SOCS3-201ENST00000330871 TONSLQ96HA7 1378 aa24.89■■□□□ 1.57
SOCS3-201ENST00000330871 FHOD3Q2V2M9 1422 aa24.88■■□□□ 1.57
SOCS3-201ENST00000330871 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
SOCS3-201ENST00000330871 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.57
SOCS3-201ENST00000330871 EFCAB5A4FU69 1503 aa24.85■■□□□ 1.57
SOCS3-201ENST00000330871 FGD6Q6ZV73 1430 aa24.82■■□□□ 1.56
SOCS3-201ENST00000330871 LAS1LQ9Y4W2 734 aaKnown RBP24.79■■□□□ 1.56
SOCS3-201ENST00000330871 CCDC18Q5T9S5 1454 aa24.79■■□□□ 1.56
SOCS3-201ENST00000330871 UACAQ9BZF9 1416 aa24.79■■□□□ 1.56
SOCS3-201ENST00000330871 WASHC2AQ641Q2 1341 aa24.79■■□□□ 1.56
SOCS3-201ENST00000330871 HFM1A2PYH4 1435 aa24.77■■□□□ 1.56
SOCS3-201ENST00000330871 NPM2Q86SE8 214 aaKnown RBP24.77■■□□□ 1.56
SOCS3-201ENST00000330871 FMN1Q68DA7 1419 aa24.76■■□□□ 1.55
SOCS3-201ENST00000330871 NEFMP07197 916 aa24.76■■□□□ 1.55
SOCS3-201ENST00000330871 EIF5BO60841 1220 aaKnown RBP24.73■■□□□ 1.55
SOCS3-201ENST00000330871 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
SOCS3-201ENST00000330871 ZBED9Q6R2W3 1325 aa24.72■■□□□ 1.55
SOCS3-201ENST00000330871 MRS2Q9HD23 443 aa24.72■■□□□ 1.55
SOCS3-201ENST00000330871 MTUS2Q5JR59 1369 aa24.72■■□□□ 1.55
SOCS3-201ENST00000330871 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
SOCS3-201ENST00000330871 PTPRKQ15262 1439 aa24.7■■□□□ 1.55
SOCS3-201ENST00000330871 AKNAQ7Z591 1439 aa24.7■■□□□ 1.54
SOCS3-201ENST00000330871 RAD54L2Q9Y4B4 1467 aa24.69■■□□□ 1.54
SOCS3-201ENST00000330871 PTPN23Q9H3S7 1636 aa24.69■■□□□ 1.54
SOCS3-201ENST00000330871 BRPF3Q9ULD4 1205 aa24.69■■□□□ 1.54
SOCS3-201ENST00000330871 HSPA5P11021 654 aaKnown RBP24.67■■□□□ 1.54
SOCS3-201ENST00000330871 NAIPQ13075 1403 aa24.67■■□□□ 1.54
SOCS3-201ENST00000330871 CUL7Q14999 1698 aa24.66■■□□□ 1.54
SOCS3-201ENST00000330871 SNAPC4Q5SXM2 1469 aa24.66■■□□□ 1.54
SOCS3-201ENST00000330871 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
SOCS3-201ENST00000330871 CTTNBP2Q8WZ74 1663 aa24.65■■□□□ 1.54
SOCS3-201ENST00000330871 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
SOCS3-201ENST00000330871 SENP3-EIF4A1A0A087X0R7 540 aa24.63■■□□□ 1.53
SOCS3-201ENST00000330871 PRKRIP1Q9H875 184 aaPredicted RBP24.63■■□□□ 1.53
SOCS3-201ENST00000330871 MYOM3Q5VTT5 1437 aa24.61■■□□□ 1.53
SOCS3-201ENST00000330871 C11orf95C9JLR9 678 aaPredicted RBP24.61■■□□□ 1.53
SOCS3-201ENST00000330871 WASHC2CQ9Y4E1 1318 aa24.61■■□□□ 1.53
SOCS3-201ENST00000330871 TOPBP1Q92547 1522 aa24.6■■□□□ 1.53
SOCS3-201ENST00000330871 NCOA2Q15596 1464 aa24.59■■□□□ 1.53
SOCS3-201ENST00000330871 KDM5BQ9UGL1 1544 aa24.59■■□□□ 1.53
SOCS3-201ENST00000330871 CNTLNQ9NXG0 1405 aa24.56■■□□□ 1.52
SOCS3-201ENST00000330871 USP35Q9P2H5 1018 aa24.56■■□□□ 1.52
SOCS3-201ENST00000330871 CNGB1Q14028 1251 aaPredicted RBP24.55■■□□□ 1.52
SOCS3-201ENST00000330871 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms