RNA–Protein interactions for RNA: ENST00000330722.6

KRT6A-201, Transcript of keratin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT6A, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6A-201ENST00000330722 LRRC9Q6ZRR7 1453 aa27.07■■□□□ 1.92
KRT6A-201ENST00000330722 MAP3K1Q13233 1512 aa27.06■■□□□ 1.92
KRT6A-201ENST00000330722 CENPBP07199 599 aaPredicted RBP27.06■■□□□ 1.92
KRT6A-201ENST00000330722 PHLDB1Q86UU1 1377 aa27.06■■□□□ 1.92
KRT6A-201ENST00000330722 FHOD3Q2V2M9 1422 aa27.05■■□□□ 1.92
KRT6A-201ENST00000330722 PCF11O94913 1555 aaKnown RBP27.05■■□□□ 1.92
KRT6A-201ENST00000330722 URB2Q14146 1524 aaKnown RBP27.04■■□□□ 1.92
KRT6A-201ENST00000330722 YTHDC1Q96MU7 727 aaKnown RBP27.04■■□□□ 1.92
KRT6A-201ENST00000330722 GTF3C3Q9Y5Q9 886 aa27.02■■□□□ 1.92
KRT6A-201ENST00000330722 ATP1B4Q9UN42 357 aaPredicted RBP27.01■■□□□ 1.91
KRT6A-201ENST00000330722 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
KRT6A-201ENST00000330722 RAB3GAP2Q9H2M9 1393 aa26.98■■□□□ 1.91
KRT6A-201ENST00000330722 CFAP43Q8NDM7 1665 aa26.94■■□□□ 1.9
KRT6A-201ENST00000330722 TDRD9Q8NDG6 1382 aaKnown RBP26.94■■□□□ 1.9
KRT6A-201ENST00000330722 LAMC3Q9Y6N6 1575 aa26.93■■□□□ 1.9
KRT6A-201ENST00000330722 CUL7Q14999 1698 aa26.92■■□□□ 1.9
KRT6A-201ENST00000330722 WDR97A6NE52 1622 aa26.91■■□□□ 1.9
KRT6A-201ENST00000330722 FAM50AQ14320 339 aaKnown RBP26.9■■□□□ 1.9
KRT6A-201ENST00000330722 MAPKBP1O60336 1514 aa26.88■■□□□ 1.89
KRT6A-201ENST00000330722 CTTNBP2Q8WZ74 1663 aa26.87■■□□□ 1.89
KRT6A-201ENST00000330722 EFCAB5A4FU69 1503 aa26.86■■□□□ 1.89
KRT6A-201ENST00000330722 FYCO1Q9BQS8 1478 aa26.84■■□□□ 1.89
KRT6A-201ENST00000330722 CASKIN1Q8WXD9 1431 aa26.84■■□□□ 1.89
KRT6A-201ENST00000330722 SETD5Q9C0A6 1442 aa26.83■■□□□ 1.89
KRT6A-201ENST00000330722 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.89
KRT6A-201ENST00000330722 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
KRT6A-201ENST00000330722 KIF21AQ7Z4S6 1674 aa26.78■■□□□ 1.88
KRT6A-201ENST00000330722 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.88
KRT6A-201ENST00000330722 PDS5BQ9NTI5 1447 aa26.77■■□□□ 1.88
KRT6A-201ENST00000330722 SNAPC4Q5SXM2 1469 aa26.76■■□□□ 1.87
KRT6A-201ENST00000330722 SIN3AQ96ST3 1273 aa26.72■■□□□ 1.87
KRT6A-201ENST00000330722 FMN1Q68DA7 1419 aa26.71■■□□□ 1.87
KRT6A-201ENST00000330722 SAMD9Q5K651 1589 aa26.69■■□□□ 1.86
KRT6A-201ENST00000330722 LRRIQ1Q96JM4 1722 aa26.68■■□□□ 1.86
KRT6A-201ENST00000330722 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
KRT6A-201ENST00000330722 FGD6Q6ZV73 1430 aa26.63■■□□□ 1.85
KRT6A-201ENST00000330722 MTUS2Q5JR59 1369 aa26.61■■□□□ 1.85
KRT6A-201ENST00000330722 GRIN2BQ13224 1484 aa26.6■■□□□ 1.85
KRT6A-201ENST00000330722 PTPRKQ15262 1439 aa26.59■■□□□ 1.85
KRT6A-201ENST00000330722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.58■■□□□ 1.85
KRT6A-201ENST00000330722 NCOA2Q15596 1464 aa26.53■■□□□ 1.84
KRT6A-201ENST00000330722 MAGI3Q5TCQ9 1506 aa26.5■■□□□ 1.83
KRT6A-201ENST00000330722 PELP1Q8IZL8 1130 aaKnown RBP26.5■■□□□ 1.83
KRT6A-201ENST00000330722 PBRM1Q86U86 1689 aa26.49■■□□□ 1.83
KRT6A-201ENST00000330722 MYOM3Q5VTT5 1437 aa26.46■■□□□ 1.83
KRT6A-201ENST00000330722 CCDC18Q5T9S5 1454 aa26.44■■□□□ 1.82
KRT6A-201ENST00000330722 KCNH8Q96L42 1107 aa26.43■■□□□ 1.82
KRT6A-201ENST00000330722 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
KRT6A-201ENST00000330722 HFM1A2PYH4 1435 aa26.41■■□□□ 1.82
KRT6A-201ENST00000330722 SUPT6HQ7KZ85 1726 aaKnown RBP26.41■■□□□ 1.82
KRT6A-201ENST00000330722 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
KRT6A-201ENST00000330722 HIRIP3Q9BW71 556 aaPredicted RBP26.4■■□□□ 1.82
KRT6A-201ENST00000330722 EHBP1L1Q8N3D4 1523 aa26.4■■□□□ 1.82
KRT6A-201ENST00000330722 MRC2Q9UBG0 1479 aa26.4■■□□□ 1.82
KRT6A-201ENST00000330722 PTPN23Q9H3S7 1636 aa26.4■■□□□ 1.82
KRT6A-201ENST00000330722 ARID3CA6NKF2 412 aa26.39■■□□□ 1.81
KRT6A-201ENST00000330722 UGGT2Q9NYU1 1516 aa26.39■■□□□ 1.81
KRT6A-201ENST00000330722 NAIPQ13075 1403 aa26.38■■□□□ 1.81
KRT6A-201ENST00000330722 ZNF608Q9ULD9 1512 aaPredicted RBP26.38■■□□□ 1.81
KRT6A-201ENST00000330722 IQGAP2Q13576 1575 aa26.38■■□□□ 1.81
KRT6A-201ENST00000330722 PPP1R15AO75807 674 aaPredicted RBP26.38■■□□□ 1.81
KRT6A-201ENST00000330722 ARHGEF11O15085 1522 aa26.37■■□□□ 1.81
KRT6A-201ENST00000330722 DDX10Q13206 875 aaKnown RBP26.34■■□□□ 1.81
KRT6A-201ENST00000330722 CDK13Q14004 1512 aaKnown RBP26.33■■□□□ 1.81
KRT6A-201ENST00000330722 TIMELESSQ9UNS1 1208 aa26.33■■□□□ 1.81
KRT6A-201ENST00000330722 UACAQ9BZF9 1416 aa26.32■■□□□ 1.8
KRT6A-201ENST00000330722 EPRSP07814 1512 aaKnown RBP26.31■■□□□ 1.8
KRT6A-201ENST00000330722 CHIC2Q9UKJ5 165 aa26.31■■□□□ 1.8
KRT6A-201ENST00000330722 RRP7BPQ9NSQ0 103 aa26.3■■□□□ 1.8
KRT6A-201ENST00000330722 HECW1Q76N89 1606 aa26.29■■□□□ 1.8
KRT6A-201ENST00000330722 WDR62O43379 1518 aa26.25■■□□□ 1.79
KRT6A-201ENST00000330722 TONSLQ96HA7 1378 aa26.23■■□□□ 1.79
KRT6A-201ENST00000330722 TCOF1Q13428 1488 aaKnown RBP26.23■■□□□ 1.79
KRT6A-201ENST00000330722 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
KRT6A-201ENST00000330722 KDM6BO15054 1643 aa26.2■■□□□ 1.79
KRT6A-201ENST00000330722 DENND4BO75064 1496 aaPredicted RBP26.19■■□□□ 1.78
KRT6A-201ENST00000330722 DISP1Q96F81 1524 aa26.17■■□□□ 1.78
KRT6A-201ENST00000330722 KDM5BQ9UGL1 1544 aa26.17■■□□□ 1.78
KRT6A-201ENST00000330722 KIAA0586Q9BVV6 1533 aa26.12■■□□□ 1.77
KRT6A-201ENST00000330722 KIAA0556O60303 1618 aa26.12■■□□□ 1.77
KRT6A-201ENST00000330722 GCC2Q8IWJ2 1684 aa26.11■■□□□ 1.77
KRT6A-201ENST00000330722 EIF4G3O43432 1585 aaKnown RBP26.1■■□□□ 1.77
KRT6A-201ENST00000330722 SUPT16HQ9Y5B9 1047 aaKnown RBP26.1■■□□□ 1.77
KRT6A-201ENST00000330722 TRIM52Q96A61 297 aa26.09■■□□□ 1.77
KRT6A-201ENST00000330722 MIA2Q96PC5 1412 aa26.09■■□□□ 1.77
KRT6A-201ENST00000330722 GRIN2AQ12879 1464 aa26.09■■□□□ 1.77
KRT6A-201ENST00000330722 NUP153P49790 1475 aaKnown RBP26.08■■□□□ 1.77
KRT6A-201ENST00000330722 ZNF644Q9H582 1327 aaPredicted RBP26.07■■□□□ 1.76
KRT6A-201ENST00000330722 FOXD1Q16676 465 aa26.05■■□□□ 1.76
KRT6A-201ENST00000330722 AKNAQ7Z591 1439 aa26.02■■□□□ 1.76
KRT6A-201ENST00000330722 MPHOSPH9Q99550 1183 aa26.01■■□□□ 1.75
KRT6A-201ENST00000330722 RAPGEF6Q8TEU7 1601 aa25.99■■□□□ 1.75
KRT6A-201ENST00000330722 DAPK1P53355 1430 aa25.99■■□□□ 1.75
KRT6A-201ENST00000330722 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
KRT6A-201ENST00000330722 ABCC5O15440 1437 aa25.98■■□□□ 1.75
KRT6A-201ENST00000330722 CEP170Q5SW79 1584 aa25.96■■□□□ 1.75
KRT6A-201ENST00000330722 PRG4Q92954 1404 aaPredicted RBP25.95■■□□□ 1.74
KRT6A-201ENST00000330722 ANP32CO43423 234 aa25.94■■□□□ 1.74
KRT6A-201ENST00000330722 PLB1Q6P1J6 1458 aa25.94■■□□□ 1.74
KRT6A-201ENST00000330722 FBLN2P98095 1184 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms