RNA–Protein interactions for RNA: ENST00000330575.9

RGPD8-202, Transcript of RANBP2-like and GRIP domain containing 8, humanhuman

TSL 2 BASIC

Gene RGPD8, Length 2,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD8-202ENST00000330575 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
RGPD8-202ENST00000330575 VPS8Q8N3P4 1428 aa21.41■■□□□ 1.02
RGPD8-202ENST00000330575 IRX6P78412 446 aaPredicted RBP21.38■■□□□ 1.01
RGPD8-202ENST00000330575 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
RGPD8-202ENST00000330575 NBR1Q14596 966 aa21.29■■□□□ 1
RGPD8-202ENST00000330575 SALL2Q9Y467 1007 aaPredicted RBP21.29■■□□□ 1
RGPD8-202ENST00000330575 CEP164Q9UPV0 1460 aa21.29■■□□□ 1
RGPD8-202ENST00000330575 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
RGPD8-202ENST00000330575 HIRIP3Q9BW71 556 aaPredicted RBP21.27■□□□□ 0.99
RGPD8-202ENST00000330575 KIF21AQ7Z4S6 1674 aa21.26■□□□□ 0.99
RGPD8-202ENST00000330575 PPP1R15AO75807 674 aaPredicted RBP21.23■□□□□ 0.99
RGPD8-202ENST00000330575 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
RGPD8-202ENST00000330575 ANP32CO43423 234 aa21.21■□□□□ 0.99
RGPD8-202ENST00000330575 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
RGPD8-202ENST00000330575 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
RGPD8-202ENST00000330575 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
RGPD8-202ENST00000330575 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
RGPD8-202ENST00000330575 CCER2I3L3R5 266 aa21.2■□□□□ 0.98
RGPD8-202ENST00000330575 KIF21BO75037 1637 aa21.17■□□□□ 0.98
RGPD8-202ENST00000330575 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
RGPD8-202ENST00000330575 PAK3O75914 559 aaPredicted RBP21.14■□□□□ 0.97
RGPD8-202ENST00000330575 NOP58Q9Y2X3 529 aaKnown RBP21.13■□□□□ 0.97
RGPD8-202ENST00000330575 SIN3AQ96ST3 1273 aa21.12■□□□□ 0.97
RGPD8-202ENST00000330575 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
RGPD8-202ENST00000330575 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
RGPD8-202ENST00000330575 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
RGPD8-202ENST00000330575 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
RGPD8-202ENST00000330575 HNRNPUQ00839 825 aaKnown RBP eCLIP21.1■□□□□ 0.97
RGPD8-202ENST00000330575 RTN4Q9NQC3 1192 aaKnown RBP21.1■□□□□ 0.97
RGPD8-202ENST00000330575 IL27Q8NEV9 243 aa21.08■□□□□ 0.96
RGPD8-202ENST00000330575 CUX2O14529 1486 aa21.07■□□□□ 0.96
RGPD8-202ENST00000330575 ERICH6BQ5W0A0 696 aa21.07■□□□□ 0.96
RGPD8-202ENST00000330575 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
RGPD8-202ENST00000330575 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
RGPD8-202ENST00000330575 PPP4R2Q9NY27 417 aa21.05■□□□□ 0.96
RGPD8-202ENST00000330575 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.04■□□□□ 0.96
RGPD8-202ENST00000330575 RAB3GAP2Q9H2M9 1393 aa21.04■□□□□ 0.96
RGPD8-202ENST00000330575 B4GALNT3Q6L9W6 998 aa21.04■□□□□ 0.96
RGPD8-202ENST00000330575 RRBP1Q9P2E9 1410 aaKnown RBP21.03■□□□□ 0.96
RGPD8-202ENST00000330575 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.95
RGPD8-202ENST00000330575 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
RGPD8-202ENST00000330575 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
RGPD8-202ENST00000330575 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
RGPD8-202ENST00000330575 RTL5Q5HYW3 569 aaPredicted RBP20.97■□□□□ 0.95
RGPD8-202ENST00000330575 ERCC6Q03468 1493 aa20.97■□□□□ 0.95
RGPD8-202ENST00000330575 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
RGPD8-202ENST00000330575 IGF1RP08069 1367 aa20.93■□□□□ 0.94
RGPD8-202ENST00000330575 WDR62O43379 1518 aa20.91■□□□□ 0.94
RGPD8-202ENST00000330575 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
RGPD8-202ENST00000330575 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.93
RGPD8-202ENST00000330575 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
RGPD8-202ENST00000330575 UBE2Q2Q8WVN8 375 aa20.85■□□□□ 0.93
RGPD8-202ENST00000330575 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
RGPD8-202ENST00000330575 ABCA5Q8WWZ7 1642 aa20.84■□□□□ 0.93
RGPD8-202ENST00000330575 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.93
RGPD8-202ENST00000330575 SETD5Q9C0A6 1442 aa20.83■□□□□ 0.92
RGPD8-202ENST00000330575 CARMIL1Q5VZK9 1371 aa20.83■□□□□ 0.92
RGPD8-202ENST00000330575 IPO9Q96P70 1041 aaKnown RBP20.83■□□□□ 0.92
RGPD8-202ENST00000330575 ANP32AP39687 249 aaKnown RBP20.82■□□□□ 0.92
RGPD8-202ENST00000330575 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
RGPD8-202ENST00000330575 CUL7Q14999 1698 aa20.77■□□□□ 0.92
RGPD8-202ENST00000330575 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
RGPD8-202ENST00000330575 TIMELESSQ9UNS1 1208 aa20.75■□□□□ 0.91
RGPD8-202ENST00000330575 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
RGPD8-202ENST00000330575 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
RGPD8-202ENST00000330575 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.91
RGPD8-202ENST00000330575 FAM9BQ8IZU0 186 aa20.72■□□□□ 0.91
RGPD8-202ENST00000330575 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
RGPD8-202ENST00000330575 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
RGPD8-202ENST00000330575 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
RGPD8-202ENST00000330575 LAS1LQ9Y4W2 734 aaKnown RBP20.68■□□□□ 0.9
RGPD8-202ENST00000330575 WASHC2AQ641Q2 1341 aa20.68■□□□□ 0.9
RGPD8-202ENST00000330575 TONSLQ96HA7 1378 aa20.66■□□□□ 0.9
RGPD8-202ENST00000330575 NEFMP07197 916 aa20.65■□□□□ 0.9
RGPD8-202ENST00000330575 NPM2Q86SE8 214 aaKnown RBP20.65■□□□□ 0.9
RGPD8-202ENST00000330575 EIF4G3O43432 1585 aaKnown RBP20.62■□□□□ 0.89
RGPD8-202ENST00000330575 GRIN2BQ13224 1484 aa20.61■□□□□ 0.89
RGPD8-202ENST00000330575 BRPF3Q9ULD4 1205 aa20.61■□□□□ 0.89
RGPD8-202ENST00000330575 CTTNBP2Q8WZ74 1663 aa20.58■□□□□ 0.88
RGPD8-202ENST00000330575 ADAMTS12P58397 1594 aa20.57■□□□□ 0.88
RGPD8-202ENST00000330575 ZBED9Q6R2W3 1325 aa20.57■□□□□ 0.88
RGPD8-202ENST00000330575 MRS2Q9HD23 443 aa20.57■□□□□ 0.88
RGPD8-202ENST00000330575 PHLDB1Q86UU1 1377 aa20.57■□□□□ 0.88
RGPD8-202ENST00000330575 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
RGPD8-202ENST00000330575 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
RGPD8-202ENST00000330575 AKNAQ7Z591 1439 aa20.54■□□□□ 0.88
RGPD8-202ENST00000330575 C11orf95C9JLR9 678 aaPredicted RBP20.54■□□□□ 0.88
RGPD8-202ENST00000330575 WASHC2CQ9Y4E1 1318 aa20.54■□□□□ 0.88
RGPD8-202ENST00000330575 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.88
RGPD8-202ENST00000330575 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
RGPD8-202ENST00000330575 USP35Q9P2H5 1018 aa20.49■□□□□ 0.87
RGPD8-202ENST00000330575 SENP3-EIF4A1A0A087X0R7 540 aa20.49■□□□□ 0.87
RGPD8-202ENST00000330575 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
RGPD8-202ENST00000330575 TIAM1Q13009 1591 aa20.45■□□□□ 0.86
RGPD8-202ENST00000330575 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
RGPD8-202ENST00000330575 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
RGPD8-202ENST00000330575 LRRC9Q6ZRR7 1453 aa20.42■□□□□ 0.86
RGPD8-202ENST00000330575 CNGB1Q14028 1251 aaPredicted RBP20.42■□□□□ 0.86
RGPD8-202ENST00000330575 CNTLNQ9NXG0 1405 aa20.41■□□□□ 0.86
RGPD8-202ENST00000330575 PPM1GO15355 546 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms