RNA–Protein interactions for RNA: ENST00000329608.10

CSF1-201, Transcript of colony stimulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-201ENST00000329608 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
CSF1-201ENST00000329608 DNMBPQ6XZF7 1577 aa21.27■■□□□ 1
CSF1-201ENST00000329608 ACIN1Q9UKV3 1341 aaKnown RBP21.27■□□□□ 0.99
CSF1-201ENST00000329608 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
CSF1-201ENST00000329608 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
CSF1-201ENST00000329608 ABCA10Q8WWZ4 1543 aa21.21■□□□□ 0.99
CSF1-201ENST00000329608 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
CSF1-201ENST00000329608 RRBP1Q9P2E9 1410 aaKnown RBP21.21■□□□□ 0.99
CSF1-201ENST00000329608 PHLDB1Q86UU1 1377 aa21.2■□□□□ 0.98
CSF1-201ENST00000329608 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
CSF1-201ENST00000329608 MTUS2Q5JR59 1369 aa21.17■□□□□ 0.98
CSF1-201ENST00000329608 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
CSF1-201ENST00000329608 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
CSF1-201ENST00000329608 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
CSF1-201ENST00000329608 SIN3AQ96ST3 1273 aa21.13■□□□□ 0.97
CSF1-201ENST00000329608 TIAM1Q13009 1591 aa21.12■□□□□ 0.97
CSF1-201ENST00000329608 FBLN2P98095 1184 aa21.12■□□□□ 0.97
CSF1-201ENST00000329608 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
CSF1-201ENST00000329608 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
CSF1-201ENST00000329608 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.964e-6■■■■■ 28.3
CSF1-201ENST00000329608 PCF11O94913 1555 aaKnown RBP21.07■□□□□ 0.96
CSF1-201ENST00000329608 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
CSF1-201ENST00000329608 CHIC2Q9UKJ5 165 aa21.06■□□□□ 0.96
CSF1-201ENST00000329608 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
CSF1-201ENST00000329608 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.96
CSF1-201ENST00000329608 CASKIN1Q8WXD9 1431 aa21■□□□□ 0.95
CSF1-201ENST00000329608 RRP7BPQ9NSQ0 103 aa20.97■□□□□ 0.95
CSF1-201ENST00000329608 TRIM52Q96A61 297 aa20.96■□□□□ 0.95
CSF1-201ENST00000329608 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.95
CSF1-201ENST00000329608 CUL7Q14999 1698 aa20.95■□□□□ 0.94
CSF1-201ENST00000329608 EFCAB5A4FU69 1503 aa20.93■□□□□ 0.94
CSF1-201ENST00000329608 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
CSF1-201ENST00000329608 MAP3K1Q13233 1512 aa20.92■□□□□ 0.94
CSF1-201ENST00000329608 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.94
CSF1-201ENST00000329608 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
CSF1-201ENST00000329608 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
CSF1-201ENST00000329608 FGD6Q6ZV73 1430 aa20.87■□□□□ 0.93
CSF1-201ENST00000329608 MRC2Q9UBG0 1479 aa20.84■□□□□ 0.93
CSF1-201ENST00000329608 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.93
CSF1-201ENST00000329608 CTTNBP2Q8WZ74 1663 aa20.83■□□□□ 0.93
CSF1-201ENST00000329608 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
CSF1-201ENST00000329608 TONSLQ96HA7 1378 aa20.82■□□□□ 0.92
CSF1-201ENST00000329608 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
CSF1-201ENST00000329608 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
CSF1-201ENST00000329608 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
CSF1-201ENST00000329608 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
CSF1-201ENST00000329608 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
CSF1-201ENST00000329608 MAPKBP1O60336 1514 aa20.77■□□□□ 0.92
CSF1-201ENST00000329608 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
CSF1-201ENST00000329608 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
CSF1-201ENST00000329608 PTPRKQ15262 1439 aa20.73■□□□□ 0.91
CSF1-201ENST00000329608 TARBP1Q13395 1621 aaKnown RBP20.73■□□□□ 0.91
CSF1-201ENST00000329608 CCDC18Q5T9S5 1454 aa20.73■□□□□ 0.91
CSF1-201ENST00000329608 FOXD1Q16676 465 aa20.72■□□□□ 0.91
CSF1-201ENST00000329608 KCNH8Q96L42 1107 aa20.72■□□□□ 0.91
CSF1-201ENST00000329608 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
CSF1-201ENST00000329608 PPP1R15AO75807 674 aaPredicted RBP20.71■□□□□ 0.91
CSF1-201ENST00000329608 CDK13Q14004 1512 aaKnown RBP20.7■□□□□ 0.9
CSF1-201ENST00000329608 IQGAP2Q13576 1575 aa20.68■□□□□ 0.9
CSF1-201ENST00000329608 ZNF644Q9H582 1327 aaPredicted RBP20.68■□□□□ 0.9
CSF1-201ENST00000329608 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
CSF1-201ENST00000329608 SAMD9Q5K651 1589 aa20.66■□□□□ 0.9
CSF1-201ENST00000329608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.64■□□□□ 0.891e-6■■■■■ 32.9
CSF1-201ENST00000329608 EPRSP07814 1512 aaKnown RBP20.63■□□□□ 0.89
CSF1-201ENST00000329608 EHBP1L1Q8N3D4 1523 aa20.62■□□□□ 0.89
CSF1-201ENST00000329608 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
CSF1-201ENST00000329608 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
CSF1-201ENST00000329608 NAIPQ13075 1403 aa20.61■□□□□ 0.89
CSF1-201ENST00000329608 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
CSF1-201ENST00000329608 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
CSF1-201ENST00000329608 TIMELESSQ9UNS1 1208 aa20.6■□□□□ 0.89
CSF1-201ENST00000329608 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
CSF1-201ENST00000329608 MAGI3Q5TCQ9 1506 aa20.6■□□□□ 0.89
CSF1-201ENST00000329608 SUPT6HQ7KZ85 1726 aaKnown RBP20.59■□□□□ 0.89
CSF1-201ENST00000329608 ANP32CO43423 234 aa20.59■□□□□ 0.89
CSF1-201ENST00000329608 UACAQ9BZF9 1416 aa20.59■□□□□ 0.89
CSF1-201ENST00000329608 CNGB1Q14028 1251 aaPredicted RBP20.57■□□□□ 0.88
CSF1-201ENST00000329608 MPHOSPH9Q99550 1183 aa20.57■□□□□ 0.88
CSF1-201ENST00000329608 SLC4A1APQ9BWU0 796 aaKnown RBP20.57■□□□□ 0.88
CSF1-201ENST00000329608 ZNF326Q5BKZ1 582 aaKnown RBP20.56■□□□□ 0.88
CSF1-201ENST00000329608 HECW1Q76N89 1606 aa20.55■□□□□ 0.88
CSF1-201ENST00000329608 KIAA0586Q9BVV6 1533 aa20.55■□□□□ 0.88
CSF1-201ENST00000329608 PTPN23Q9H3S7 1636 aa20.54■□□□□ 0.88
CSF1-201ENST00000329608 GRIN2AQ12879 1464 aa20.54■□□□□ 0.88
CSF1-201ENST00000329608 THOC2Q8NI27 1593 aaKnown RBP20.53■□□□□ 0.88
CSF1-201ENST00000329608 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
CSF1-201ENST00000329608 PLEKHD1A6NEE1 506 aa20.52■□□□□ 0.88
CSF1-201ENST00000329608 UGGT2Q9NYU1 1516 aa20.52■□□□□ 0.88
CSF1-201ENST00000329608 LRRIQ1Q96JM4 1722 aa20.51■□□□□ 0.87
CSF1-201ENST00000329608 PRG4Q92954 1404 aaPredicted RBP20.5■□□□□ 0.87
CSF1-201ENST00000329608 WDR62O43379 1518 aa20.48■□□□□ 0.87
CSF1-201ENST00000329608 PLB1Q6P1J6 1458 aa20.48■□□□□ 0.87
CSF1-201ENST00000329608 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
CSF1-201ENST00000329608 L3MBTL2Q969R5 705 aa20.47■□□□□ 0.87
CSF1-201ENST00000329608 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
CSF1-201ENST00000329608 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
CSF1-201ENST00000329608 BCANQ96GW7 911 aa20.46■□□□□ 0.87
CSF1-201ENST00000329608 DISP1Q96F81 1524 aa20.45■□□□□ 0.86
CSF1-201ENST00000329608 HSPA5P11021 654 aaKnown RBP20.43■□□□□ 0.86
CSF1-201ENST00000329608 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms