RNA–Protein interactions for RNA: ENST00000329474.6

CARMIL1-201, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARMIL1, Length 5,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-201ENST00000329474 FKBP8Q14318 412 aa13.87□□□□□ -0.19
CARMIL1-201ENST00000329474 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
CARMIL1-201ENST00000329474 AEBP2Q6ZN18 517 aaPredicted RBP13.82□□□□□ -0.2
CARMIL1-201ENST00000329474 FAM9BQ8IZU0 186 aa13.82□□□□□ -0.2
CARMIL1-201ENST00000329474 IRX6P78412 446 aaPredicted RBP13.82□□□□□ -0.2
CARMIL1-201ENST00000329474 CCNB3Q8WWL7 1395 aa13.82□□□□□ -0.2
CARMIL1-201ENST00000329474 HNRNPUQ00839 825 aaKnown RBP eCLIP13.8□□□□□ -0.2
CARMIL1-201ENST00000329474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
CARMIL1-201ENST00000329474 CDK11AQ9UQ88 783 aaPredicted RBP13.79□□□□□ -0.2
CARMIL1-201ENST00000329474 SYNJ1O43426 1573 aa13.78□□□□□ -0.2
CARMIL1-201ENST00000329474 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
CARMIL1-201ENST00000329474 PDS5BQ9NTI5 1447 aa13.78□□□□□ -0.2
CARMIL1-201ENST00000329474 SALL2Q9Y467 1007 aaPredicted RBP13.76□□□□□ -0.21
CARMIL1-201ENST00000329474 TDRD9Q8NDG6 1382 aaKnown RBP13.76□□□□□ -0.21
CARMIL1-201ENST00000329474 FHOD3Q2V2M9 1422 aa13.74□□□□□ -0.21
CARMIL1-201ENST00000329474 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
CARMIL1-201ENST00000329474 FOXD1Q16676 465 aa13.71□□□□□ -0.21
CARMIL1-201ENST00000329474 RAB3GAP2Q9H2M9 1393 aa13.7□□□□□ -0.22
CARMIL1-201ENST00000329474 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
CARMIL1-201ENST00000329474 KCNH8Q96L42 1107 aa13.68□□□□□ -0.22
CARMIL1-201ENST00000329474 CADPSQ9ULU8 1353 aa13.67□□□□□ -0.22
CARMIL1-201ENST00000329474 ARHGAP35Q9NRY4 1499 aa13.66□□□□□ -0.22
CARMIL1-201ENST00000329474 RTL5Q5HYW3 569 aaPredicted RBP13.66□□□□□ -0.22
CARMIL1-201ENST00000329474 UNC13AQ9UPW8 1703 aa13.66□□□□□ -0.22
CARMIL1-201ENST00000329474 FHAD1B1AJZ9 1412 aa13.66□□□□□ -0.22
CARMIL1-201ENST00000329474 KIF21BO75037 1637 aa13.66□□□□□ -0.22
CARMIL1-201ENST00000329474 SETD5Q9C0A6 1442 aa13.65□□□□□ -0.22
CARMIL1-201ENST00000329474 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
CARMIL1-201ENST00000329474 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
CARMIL1-201ENST00000329474 CHGAP10645 457 aaKnown RBP13.63□□□□□ -0.23
CARMIL1-201ENST00000329474 FANCD2Q9BXW9 1451 aa13.62□□□□□ -0.23
CARMIL1-201ENST00000329474 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
CARMIL1-201ENST00000329474 CFDP1Q9UEE9 299 aaPredicted RBP13.61□□□□□ -0.23
CARMIL1-201ENST00000329474 EIF4G2P78344 907 aaKnown RBP eCLIP13.61□□□□□ -0.23
CARMIL1-201ENST00000329474 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
CARMIL1-201ENST00000329474 BICRAQ9NZM4 1560 aa13.61□□□□□ -0.23
CARMIL1-201ENST00000329474 DHX57Q6P158 1386 aaKnown RBP13.6□□□□□ -0.23
CARMIL1-201ENST00000329474 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
CARMIL1-201ENST00000329474 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
CARMIL1-201ENST00000329474 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
CARMIL1-201ENST00000329474 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
CARMIL1-201ENST00000329474 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
CARMIL1-201ENST00000329474 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
CARMIL1-201ENST00000329474 PLEKHD1A6NEE1 506 aa13.55□□□□□ -0.24
CARMIL1-201ENST00000329474 SUPT16HQ9Y5B9 1047 aaKnown RBP13.55□□□□□ -0.24
CARMIL1-201ENST00000329474 CUX1P39880 1505 aa13.54□□□□□ -0.24
CARMIL1-201ENST00000329474 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
CARMIL1-201ENST00000329474 IGF1RP08069 1367 aa13.54□□□□□ -0.24
CARMIL1-201ENST00000329474 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
CARMIL1-201ENST00000329474 NESP48681 1621 aa13.53□□□□□ -0.24
CARMIL1-201ENST00000329474 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
CARMIL1-201ENST00000329474 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
CARMIL1-201ENST00000329474 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
CARMIL1-201ENST00000329474 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
CARMIL1-201ENST00000329474 CANXP27824 592 aaKnown RBP13.49□□□□□ -0.25
CARMIL1-201ENST00000329474 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
CARMIL1-201ENST00000329474 FMN1Q68DA7 1419 aa13.48□□□□□ -0.25
CARMIL1-201ENST00000329474 PHLDB1Q86UU1 1377 aa13.47□□□□□ -0.25
CARMIL1-201ENST00000329474 CARD11Q9BXL7 1154 aa13.46□□□□□ -0.25
CARMIL1-201ENST00000329474 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
CARMIL1-201ENST00000329474 MPHOSPH9Q99550 1183 aa13.43□□□□□ -0.26
CARMIL1-201ENST00000329474 CFTRP13569 1480 aa13.42□□□□□ -0.26
CARMIL1-201ENST00000329474 ANP32AP39687 249 aaKnown RBP13.42□□□□□ -0.26
CARMIL1-201ENST00000329474 DCAF11Q8TEB1 546 aa13.41□□□□□ -0.26
CARMIL1-201ENST00000329474 CCDC136Q96JN2 1154 aa13.41□□□□□ -0.26
CARMIL1-201ENST00000329474 NEFMP07197 916 aa13.4□□□□□ -0.26
CARMIL1-201ENST00000329474 CC2D1BQ5T0F9 858 aaKnown RBP13.4□□□□□ -0.26
CARMIL1-201ENST00000329474 PKD2Q13563 968 aa13.4□□□□□ -0.26
CARMIL1-201ENST00000329474 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.26
CARMIL1-201ENST00000329474 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
CARMIL1-201ENST00000329474 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
CARMIL1-201ENST00000329474 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
CARMIL1-201ENST00000329474 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
CARMIL1-201ENST00000329474 GAPVD1Q14C86 1478 aa13.38□□□□□ -0.27
CARMIL1-201ENST00000329474 PRXQ9BXM0 1461 aa13.38□□□□□ -0.27
CARMIL1-201ENST00000329474 NBR1Q14596 966 aa13.37□□□□□ -0.27
CARMIL1-201ENST00000329474 CCDC18Q5T9S5 1454 aa13.37□□□□□ -0.27
CARMIL1-201ENST00000329474 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
CARMIL1-201ENST00000329474 HNRNPMP52272 730 aaKnown RBP eCLIP13.37□□□□□ -0.27
CARMIL1-201ENST00000329474 L3MBTL2Q969R5 705 aa13.36□□□□□ -0.27
CARMIL1-201ENST00000329474 SLC24A1O60721 1099 aa13.36□□□□□ -0.27
CARMIL1-201ENST00000329474 CYB5RLQ6IPT4 315 aa13.35□□□□□ -0.27
CARMIL1-201ENST00000329474 PRDM2Q13029 1718 aa13.35□□□□□ -0.27
CARMIL1-201ENST00000329474 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
CARMIL1-201ENST00000329474 ZNF644Q9H582 1327 aaPredicted RBP13.35□□□□□ -0.27
CARMIL1-201ENST00000329474 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
CARMIL1-201ENST00000329474 B4GALNT3Q6L9W6 998 aa13.34□□□□□ -0.27
CARMIL1-201ENST00000329474 FGD6Q6ZV73 1430 aa13.3□□□□□ -0.28
CARMIL1-201ENST00000329474 TNNT2P45379 298 aaPredicted RBP13.3□□□□□ -0.28
CARMIL1-201ENST00000329474 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
CARMIL1-201ENST00000329474 NUP155O75694 1391 aa13.29□□□□□ -0.28
CARMIL1-201ENST00000329474 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
CARMIL1-201ENST00000329474 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
CARMIL1-201ENST00000329474 CARMIL2Q6F5E8 1435 aa13.28□□□□□ -0.28
CARMIL1-201ENST00000329474 PCF11O94913 1555 aaKnown RBP13.27□□□□□ -0.28
CARMIL1-201ENST00000329474 TIAM1Q13009 1591 aa13.27□□□□□ -0.29
CARMIL1-201ENST00000329474 NCOA2Q15596 1464 aa13.27□□□□□ -0.29
CARMIL1-201ENST00000329474 CCER2I3L3R5 266 aa13.26□□□□□ -0.29
CARMIL1-201ENST00000329474 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
CARMIL1-201ENST00000329474 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms