RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
LIN28A-202ENST00000326279 CENPBP07199 599 aaPredicted RBP19.02■□□□□ 0.64
LIN28A-202ENST00000326279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.02■□□□□ 0.64
LIN28A-202ENST00000326279 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
LIN28A-202ENST00000326279 FHOD3Q2V2M9 1422 aa19.01■□□□□ 0.63
LIN28A-202ENST00000326279 CUX1P39880 1505 aa19■□□□□ 0.63
LIN28A-202ENST00000326279 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
LIN28A-202ENST00000326279 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
LIN28A-202ENST00000326279 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
LIN28A-202ENST00000326279 CFDP1Q9UEE9 299 aaPredicted RBP18.91■□□□□ 0.62
LIN28A-202ENST00000326279 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
LIN28A-202ENST00000326279 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.62
LIN28A-202ENST00000326279 TSPY4P0CV99 314 aa18.86■□□□□ 0.61
LIN28A-202ENST00000326279 TSPY10P0CW01 314 aa18.86■□□□□ 0.61
LIN28A-202ENST00000326279 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.61
LIN28A-202ENST00000326279 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.61
LIN28A-202ENST00000326279 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.6
LIN28A-202ENST00000326279 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
LIN28A-202ENST00000326279 CHGAP10645 457 aaKnown RBP18.81■□□□□ 0.6
LIN28A-202ENST00000326279 OSCARQ8IYS5 282 aa18.8■□□□□ 0.6
LIN28A-202ENST00000326279 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
LIN28A-202ENST00000326279 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
LIN28A-202ENST00000326279 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
LIN28A-202ENST00000326279 SLC4A1APQ9BWU0 796 aaKnown RBP18.75■□□□□ 0.59
LIN28A-202ENST00000326279 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
LIN28A-202ENST00000326279 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
LIN28A-202ENST00000326279 CARMIL2Q6F5E8 1435 aa18.73■□□□□ 0.59
LIN28A-202ENST00000326279 KDM2AQ9Y2K7 1162 aa18.71■□□□□ 0.59
LIN28A-202ENST00000326279 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
LIN28A-202ENST00000326279 SIN3AQ96ST3 1273 aa18.68■□□□□ 0.58
LIN28A-202ENST00000326279 BCANQ96GW7 911 aa18.68■□□□□ 0.58
LIN28A-202ENST00000326279 CCNB3Q8WWL7 1395 aa18.68■□□□□ 0.58
LIN28A-202ENST00000326279 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
LIN28A-202ENST00000326279 FOXD1Q16676 465 aa18.67■□□□□ 0.58
LIN28A-202ENST00000326279 SNAPC4Q5SXM2 1469 aa18.66■□□□□ 0.58
LIN28A-202ENST00000326279 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
LIN28A-202ENST00000326279 PTPRGP23470 1445 aa18.65■□□□□ 0.58
LIN28A-202ENST00000326279 RGL3Q3MIN7 710 aa18.65■□□□□ 0.58
LIN28A-202ENST00000326279 HNRNPMP52272 730 aaKnown RBP eCLIP18.65■□□□□ 0.58
LIN28A-202ENST00000326279 MLECQ14165 292 aa18.65■□□□□ 0.58
LIN28A-202ENST00000326279 ESF1Q9H501 851 aaKnown RBP18.63■□□□□ 0.57
LIN28A-202ENST00000326279 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
LIN28A-202ENST00000326279 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
LIN28A-202ENST00000326279 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
LIN28A-202ENST00000326279 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
LIN28A-202ENST00000326279 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
LIN28A-202ENST00000326279 ARID4BQ4LE39 1312 aaPredicted RBP18.59■□□□□ 0.57
LIN28A-202ENST00000326279 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
LIN28A-202ENST00000326279 TONSLQ96HA7 1378 aa18.54■□□□□ 0.56
LIN28A-202ENST00000326279 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
LIN28A-202ENST00000326279 ARHGAP35Q9NRY4 1499 aa18.53■□□□□ 0.56
LIN28A-202ENST00000326279 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
LIN28A-202ENST00000326279 PRG4Q92954 1404 aaPredicted RBP18.52■□□□□ 0.56
LIN28A-202ENST00000326279 KIF21BO75037 1637 aa18.52■□□□□ 0.56
LIN28A-202ENST00000326279 GGT6Q6P531 493 aa18.52■□□□□ 0.55
LIN28A-202ENST00000326279 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
LIN28A-202ENST00000326279 MIER1Q8N108 512 aa18.48■□□□□ 0.55
LIN28A-202ENST00000326279 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
LIN28A-202ENST00000326279 EFCAB2Q5VUJ9 269 aa18.44■□□□□ 0.54
LIN28A-202ENST00000326279 NEFLP07196 543 aa18.42■□□□□ 0.54
LIN28A-202ENST00000326279 PHLDB1Q86UU1 1377 aa18.41■□□□□ 0.54
LIN28A-202ENST00000326279 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
LIN28A-202ENST00000326279 ANP32CO43423 234 aa18.39■□□□□ 0.54
LIN28A-202ENST00000326279 FAM69CQ0P6D2 419 aa18.39■□□□□ 0.53
LIN28A-202ENST00000326279 RAB3GAP2Q9H2M9 1393 aa18.38■□□□□ 0.53
LIN28A-202ENST00000326279 PRDM2Q13029 1718 aa18.36■□□□□ 0.53
LIN28A-202ENST00000326279 KIF3BO15066 747 aa18.35■□□□□ 0.53
LIN28A-202ENST00000326279 PKD2Q13563 968 aa18.35■□□□□ 0.53
LIN28A-202ENST00000326279 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
LIN28A-202ENST00000326279 ERICH3Q5RHP9 1530 aa18.34■□□□□ 0.53
LIN28A-202ENST00000326279 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
LIN28A-202ENST00000326279 ACIN1Q9UKV3 1341 aaKnown RBP18.32■□□□□ 0.52
LIN28A-202ENST00000326279 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
LIN28A-202ENST00000326279 GRIN2AQ12879 1464 aa18.32■□□□□ 0.52
LIN28A-202ENST00000326279 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
LIN28A-202ENST00000326279 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
LIN28A-202ENST00000326279 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
LIN28A-202ENST00000326279 SETD5Q9C0A6 1442 aa18.29■□□□□ 0.52
LIN28A-202ENST00000326279 NUTM2DQ5VT03 806 aaPredicted RBP18.29■□□□□ 0.52
LIN28A-202ENST00000326279 CCDC18Q5T9S5 1454 aa18.29■□□□□ 0.52
LIN28A-202ENST00000326279 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
LIN28A-202ENST00000326279 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.52
LIN28A-202ENST00000326279 KIAA0586Q9BVV6 1533 aa18.27■□□□□ 0.52
LIN28A-202ENST00000326279 NUP155O75694 1391 aa18.27■□□□□ 0.52
LIN28A-202ENST00000326279 DCAF11Q8TEB1 546 aa18.26■□□□□ 0.51
LIN28A-202ENST00000326279 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
LIN28A-202ENST00000326279 CASKIN1Q8WXD9 1431 aa18.24■□□□□ 0.51
LIN28A-202ENST00000326279 LRRC9Q6ZRR7 1453 aa18.24■□□□□ 0.51
LIN28A-202ENST00000326279 PPP1R15AO75807 674 aaPredicted RBP18.21■□□□□ 0.51
LIN28A-202ENST00000326279 RAPGEF3O95398 923 aa18.21■□□□□ 0.51
LIN28A-202ENST00000326279 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
LIN28A-202ENST00000326279 NCOA2Q15596 1464 aa18.18■□□□□ 0.5
LIN28A-202ENST00000326279 SAFB2Q14151 953 aaKnown RBP eCLIP18.18■□□□□ 0.5
LIN28A-202ENST00000326279 IQGAP2Q13576 1575 aa18.17■□□□□ 0.5
LIN28A-202ENST00000326279 ANKRD30AQ9BXX3 1397 aa18.16■□□□□ 0.5
LIN28A-202ENST00000326279 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
LIN28A-202ENST00000326279 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
LIN28A-202ENST00000326279 DHX57Q6P158 1386 aaKnown RBP18.14■□□□□ 0.49
LIN28A-202ENST00000326279 CARD11Q9BXL7 1154 aa18.14■□□□□ 0.49
LIN28A-202ENST00000326279 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms