RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 KIF13AQ9H1H9 1805 aa21.72■■□□□ 1.07
TPM3-204ENST00000323144 ADCY10Q96PN6 1610 aa21.67■■□□□ 1.06
TPM3-204ENST00000323144 IGF1RP08069 1367 aa21.66■■□□□ 1.06
TPM3-204ENST00000323144 KIAA0586Q9BVV6 1533 aa21.63■■□□□ 1.05
TPM3-204ENST00000323144 IQGAP2Q13576 1575 aa21.58■■□□□ 1.05
TPM3-204ENST00000323144 JPH4Q96JJ6 628 aa21.57■■□□□ 1.04
TPM3-204ENST00000323144 DIP2BQ9P265 1576 aa21.54■■□□□ 1.04
TPM3-204ENST00000323144 MAPKBP1O60336 1514 aa21.54■■□□□ 1.04
TPM3-204ENST00000323144 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
TPM3-204ENST00000323144 CTTNBP2Q8WZ74 1663 aa21.51■■□□□ 1.03
TPM3-204ENST00000323144 ABCC10Q5T3U5 1492 aa21.43■■□□□ 1.02
TPM3-204ENST00000323144 RAPGEF2Q9Y4G8 1499 aa21.43■■□□□ 1.02
TPM3-204ENST00000323144 DISP1Q96F81 1524 aa21.43■■□□□ 1.02
TPM3-204ENST00000323144 KIAA0556O60303 1618 aa21.43■■□□□ 1.02
TPM3-204ENST00000323144 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.02
TPM3-204ENST00000323144 TSPOAP1O95153 1857 aa21.39■■□□□ 1.01
TPM3-204ENST00000323144 CARMIL2Q6F5E8 1435 aa21.36■■□□□ 1.01
TPM3-204ENST00000323144 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
TPM3-204ENST00000323144 PTPRGP23470 1445 aa21.34■■□□□ 1.01
TPM3-204ENST00000323144 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
TPM3-204ENST00000323144 PPRC1Q5VV67 1664 aaKnown RBP21.32■■□□□ 1
TPM3-204ENST00000323144 ZCCHC11Q5TAX3 1644 aaKnown RBP21.32■■□□□ 1
TPM3-204ENST00000323144 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
TPM3-204ENST00000323144 UHRF1BP1LA0JNW5 1464 aa21.29■■□□□ 1
TPM3-204ENST00000323144 KDM6BO15054 1643 aa21.29■■□□□ 1
TPM3-204ENST00000323144 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
TPM3-204ENST00000323144 FAM69CQ0P6D2 419 aa21.25■□□□□ 0.99
TPM3-204ENST00000323144 NPM1P06748 294 aaKnown RBP eCLIP21.24■□□□□ 0.99
TPM3-204ENST00000323144 UACAQ9BZF9 1416 aa21.23■□□□□ 0.99
TPM3-204ENST00000323144 ASXL2Q76L83 1435 aa21.22■□□□□ 0.99
TPM3-204ENST00000323144 GLI2P10070 1586 aa21.22■□□□□ 0.99
TPM3-204ENST00000323144 KDM5BQ9UGL1 1544 aa21.21■□□□□ 0.99
TPM3-204ENST00000323144 MAP3K4Q9Y6R4 1608 aa21.21■□□□□ 0.99
TPM3-204ENST00000323144 ABCA8O94911 1581 aa21.18■□□□□ 0.98
TPM3-204ENST00000323144 PLB1Q6P1J6 1458 aa21.17■□□□□ 0.98
TPM3-204ENST00000323144 GOLGA3Q08378 1498 aa21.14■□□□□ 0.98
TPM3-204ENST00000323144 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.97
TPM3-204ENST00000323144 SAMD9Q5K651 1589 aa21.13■□□□□ 0.97
TPM3-204ENST00000323144 WDR7Q9Y4E6 1490 aa21.08■□□□□ 0.97
TPM3-204ENST00000323144 CFAP43Q8NDM7 1665 aa21.05■□□□□ 0.96
TPM3-204ENST00000323144 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
TPM3-204ENST00000323144 KIF21BO75037 1637 aa21■□□□□ 0.95
TPM3-204ENST00000323144 RAPGEF6Q8TEU7 1601 aa21■□□□□ 0.95
TPM3-204ENST00000323144 EEA1Q15075 1411 aa20.98■□□□□ 0.95
TPM3-204ENST00000323144 TEX14Q8IWB6 1497 aa20.97■□□□□ 0.95
TPM3-204ENST00000323144 COL17A1Q9UMD9 1497 aaPredicted RBP20.96■□□□□ 0.95
TPM3-204ENST00000323144 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
TPM3-204ENST00000323144 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.94
TPM3-204ENST00000323144 MAGI3Q5TCQ9 1506 aa20.88■□□□□ 0.93
TPM3-204ENST00000323144 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
TPM3-204ENST00000323144 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
TPM3-204ENST00000323144 ATP10BO94823 1461 aa20.88■□□□□ 0.93
TPM3-204ENST00000323144 ARID3CA6NKF2 412 aa20.86■□□□□ 0.93
TPM3-204ENST00000323144 EFCAB5A4FU69 1503 aa20.86■□□□□ 0.93
TPM3-204ENST00000323144 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
TPM3-204ENST00000323144 ADGRL1O94910 1474 aa20.85■□□□□ 0.93
TPM3-204ENST00000323144 FAM9AQ8IZU1 332 aaPredicted RBP20.83■□□□□ 0.93
TPM3-204ENST00000323144 CD109Q6YHK3 1445 aa20.83■□□□□ 0.93
TPM3-204ENST00000323144 KDM4FA0A1W2PPD8 638 aa20.81■□□□□ 0.92
TPM3-204ENST00000323144 FRMPD1Q5SYB0 1578 aa20.77■□□□□ 0.92
TPM3-204ENST00000323144 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
TPM3-204ENST00000323144 KCNH8Q96L42 1107 aa20.76■□□□□ 0.91
TPM3-204ENST00000323144 TTC37Q6PGP7 1564 aa20.75■□□□□ 0.91
TPM3-204ENST00000323144 CDK13Q14004 1512 aaKnown RBP20.73■□□□□ 0.91
TPM3-204ENST00000323144 LRRIQ1Q96JM4 1722 aa20.71■□□□□ 0.91
TPM3-204ENST00000323144 ARAP3Q8WWN8 1544 aa20.7■□□□□ 0.9
TPM3-204ENST00000323144 HECW1Q76N89 1606 aa20.69■□□□□ 0.9
TPM3-204ENST00000323144 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
TPM3-204ENST00000323144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.67■□□□□ 0.93e-7■□□□□ 8.5
TPM3-204ENST00000323144 CFAP74Q9C0B2 1584 aa20.67■□□□□ 0.9
TPM3-204ENST00000323144 RICTORQ6R327 1708 aa20.67■□□□□ 0.9
TPM3-204ENST00000323144 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
TPM3-204ENST00000323144 EHMT2Q96KQ7 1210 aa20.66■□□□□ 0.9
TPM3-204ENST00000323144 NEO1Q92859 1461 aa20.64■□□□□ 0.89
TPM3-204ENST00000323144 ARHGEF40Q8TER5 1519 aa20.63■□□□□ 0.89
TPM3-204ENST00000323144 KIF14Q15058 1648 aa20.6■□□□□ 0.89
TPM3-204ENST00000323144 PCF11O94913 1555 aaKnown RBP20.6■□□□□ 0.89
TPM3-204ENST00000323144 HECW2Q9P2P5 1572 aa20.59■□□□□ 0.89
TPM3-204ENST00000323144 MYO5CQ9NQX4 1742 aa20.59■□□□□ 0.89
TPM3-204ENST00000323144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
TPM3-204ENST00000323144 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
TPM3-204ENST00000323144 SIGLEC1Q9BZZ2 1709 aa20.56■□□□□ 0.88
TPM3-204ENST00000323144 ADAMTSL3P82987 1691 aa20.56■□□□□ 0.88
TPM3-204ENST00000323144 BCORL1Q5H9F3 1711 aa20.55■□□□□ 0.88
TPM3-204ENST00000323144 FANCAO15360 1455 aa20.54■□□□□ 0.88
TPM3-204ENST00000323144 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
TPM3-204ENST00000323144 ZMYM4Q5VZL5 1548 aa20.53■□□□□ 0.88
TPM3-204ENST00000323144 MADDQ8WXG6 1647 aa20.53■□□□□ 0.88
TPM3-204ENST00000323144 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
TPM3-204ENST00000323144 UBTFP17480 764 aaKnown RBP20.51■□□□□ 0.87
TPM3-204ENST00000323144 RAPGEF3O95398 923 aa20.49■□□□□ 0.87
TPM3-204ENST00000323144 DENND4BO75064 1496 aaPredicted RBP20.48■□□□□ 0.87
TPM3-204ENST00000323144 AKNAQ7Z591 1439 aa20.47■□□□□ 0.87
TPM3-204ENST00000323144 RIMS1Q86UR5 1692 aaKnown RBP20.46■□□□□ 0.87
TPM3-204ENST00000323144 ZFYVE16Q7Z3T8 1539 aa20.46■□□□□ 0.87
TPM3-204ENST00000323144 PLEKHD1A6NEE1 506 aa20.44■□□□□ 0.86
TPM3-204ENST00000323144 PREX2Q70Z35 1606 aa20.44■□□□□ 0.86
TPM3-204ENST00000323144 CDC42BPBQ9Y5S2 1711 aa20.43■□□□□ 0.86
TPM3-204ENST00000323144 POGZQ7Z3K3 1410 aa20.42■□□□□ 0.86
TPM3-204ENST00000323144 TROQ12816 1431 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms