RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
ZNF543-201ENST00000321545 NEUROD1Q13562 356 aa16.73■□□□□ 0.27
ZNF543-201ENST00000321545 KCNH8Q96L42 1107 aa16.73■□□□□ 0.27
ZNF543-201ENST00000321545 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
ZNF543-201ENST00000321545 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
ZNF543-201ENST00000321545 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
ZNF543-201ENST00000321545 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
ZNF543-201ENST00000321545 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
ZNF543-201ENST00000321545 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
ZNF543-201ENST00000321545 KIF21AQ7Z4S6 1674 aa16.63■□□□□ 0.25
ZNF543-201ENST00000321545 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
ZNF543-201ENST00000321545 RRP7BPQ9NSQ0 103 aa16.62■□□□□ 0.25
ZNF543-201ENST00000321545 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
ZNF543-201ENST00000321545 KIF21BO75037 1637 aa16.61■□□□□ 0.25
ZNF543-201ENST00000321545 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.24
ZNF543-201ENST00000321545 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
ZNF543-201ENST00000321545 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
ZNF543-201ENST00000321545 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
ZNF543-201ENST00000321545 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
ZNF543-201ENST00000321545 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
ZNF543-201ENST00000321545 YTHDC1Q96MU7 727 aaKnown RBP16.54■□□□□ 0.24
ZNF543-201ENST00000321545 ERICH3Q5RHP9 1530 aa16.5■□□□□ 0.23
ZNF543-201ENST00000321545 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
ZNF543-201ENST00000321545 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
ZNF543-201ENST00000321545 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
ZNF543-201ENST00000321545 CCNB3Q8WWL7 1395 aa16.48■□□□□ 0.23
ZNF543-201ENST00000321545 FMN1Q68DA7 1419 aa16.47■□□□□ 0.23
ZNF543-201ENST00000321545 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.23
ZNF543-201ENST00000321545 MYT1Q01538 1121 aa16.45■□□□□ 0.22
ZNF543-201ENST00000321545 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
ZNF543-201ENST00000321545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.22
ZNF543-201ENST00000321545 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
ZNF543-201ENST00000321545 CARMIL2Q6F5E8 1435 aa16.43■□□□□ 0.22
ZNF543-201ENST00000321545 SIN3AQ96ST3 1273 aa16.39■□□□□ 0.21
ZNF543-201ENST00000321545 HIRIP3Q9BW71 556 aaPredicted RBP16.38■□□□□ 0.21
ZNF543-201ENST00000321545 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
ZNF543-201ENST00000321545 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
ZNF543-201ENST00000321545 PTPRGP23470 1445 aa16.37■□□□□ 0.21
ZNF543-201ENST00000321545 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
ZNF543-201ENST00000321545 TSPY4P0CV99 314 aa16.35■□□□□ 0.21
ZNF543-201ENST00000321545 TSPY10P0CW01 314 aa16.35■□□□□ 0.21
ZNF543-201ENST00000321545 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
ZNF543-201ENST00000321545 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
ZNF543-201ENST00000321545 FOXD1Q16676 465 aa16.34■□□□□ 0.21
ZNF543-201ENST00000321545 PRG4Q92954 1404 aaPredicted RBP16.33■□□□□ 0.21
ZNF543-201ENST00000321545 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
ZNF543-201ENST00000321545 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
ZNF543-201ENST00000321545 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
ZNF543-201ENST00000321545 HNRNPMP52272 730 aaKnown RBP eCLIP16.3■□□□□ 0.2
ZNF543-201ENST00000321545 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
ZNF543-201ENST00000321545 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
ZNF543-201ENST00000321545 WDR62O43379 1518 aa16.27■□□□□ 0.2
ZNF543-201ENST00000321545 SYNJ2O15056 1496 aa16.27■□□□□ 0.2
ZNF543-201ENST00000321545 LRRC9Q6ZRR7 1453 aa16.27■□□□□ 0.19
ZNF543-201ENST00000321545 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
ZNF543-201ENST00000321545 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
ZNF543-201ENST00000321545 PLB1Q6P1J6 1458 aa16.26■□□□□ 0.19
ZNF543-201ENST00000321545 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
ZNF543-201ENST00000321545 CUL7Q14999 1698 aa16.25■□□□□ 0.19
ZNF543-201ENST00000321545 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
ZNF543-201ENST00000321545 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
ZNF543-201ENST00000321545 KIAA0586Q9BVV6 1533 aa16.25■□□□□ 0.19
ZNF543-201ENST00000321545 IQGAP2Q13576 1575 aa16.24■□□□□ 0.19
ZNF543-201ENST00000321545 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
ZNF543-201ENST00000321545 PCF11O94913 1555 aaKnown RBP16.23■□□□□ 0.19
ZNF543-201ENST00000321545 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
ZNF543-201ENST00000321545 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.18
ZNF543-201ENST00000321545 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
ZNF543-201ENST00000321545 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
ZNF543-201ENST00000321545 ABCA5Q8WWZ7 1642 aa16.19■□□□□ 0.18
ZNF543-201ENST00000321545 TONSLQ96HA7 1378 aa16.18■□□□□ 0.18
ZNF543-201ENST00000321545 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
ZNF543-201ENST00000321545 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
ZNF543-201ENST00000321545 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
ZNF543-201ENST00000321545 SETD5Q9C0A6 1442 aa16.16■□□□□ 0.18
ZNF543-201ENST00000321545 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
ZNF543-201ENST00000321545 ADAMTS12P58397 1594 aa16.15■□□□□ 0.18
ZNF543-201ENST00000321545 EFCAB5A4FU69 1503 aa16.15■□□□□ 0.18
ZNF543-201ENST00000321545 CCDC18Q5T9S5 1454 aa16.15■□□□□ 0.18
ZNF543-201ENST00000321545 TIAM1Q13009 1591 aa16.15■□□□□ 0.18
ZNF543-201ENST00000321545 FGD6Q6ZV73 1430 aa16.13■□□□□ 0.17
ZNF543-201ENST00000321545 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
ZNF543-201ENST00000321545 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
ZNF543-201ENST00000321545 THOC2Q8NI27 1593 aaKnown RBP16.1■□□□□ 0.17
ZNF543-201ENST00000321545 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
ZNF543-201ENST00000321545 MYOM3Q5VTT5 1437 aa16.09■□□□□ 0.17
ZNF543-201ENST00000321545 DHX57Q6P158 1386 aaKnown RBP16.08■□□□□ 0.16
ZNF543-201ENST00000321545 EFCAB2Q5VUJ9 269 aa16.07■□□□□ 0.16
ZNF543-201ENST00000321545 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
ZNF543-201ENST00000321545 MLECQ14165 292 aa16.05■□□□□ 0.16
ZNF543-201ENST00000321545 AFAP1Q8N556 730 aa16.05■□□□□ 0.16
ZNF543-201ENST00000321545 PKD2Q13563 968 aa16.04■□□□□ 0.16
ZNF543-201ENST00000321545 MPHOSPH9Q99550 1183 aa16.04■□□□□ 0.16
ZNF543-201ENST00000321545 CTTNBP2Q8WZ74 1663 aa16.04■□□□□ 0.16
ZNF543-201ENST00000321545 GGT6Q6P531 493 aa16.03■□□□□ 0.16
ZNF543-201ENST00000321545 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
ZNF543-201ENST00000321545 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
ZNF543-201ENST00000321545 DISP1Q96F81 1524 aa16.01■□□□□ 0.15
ZNF543-201ENST00000321545 NUP155O75694 1391 aa15.99■□□□□ 0.15
ZNF543-201ENST00000321545 UACAQ9BZF9 1416 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms