RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 RANGAP1P46060 587 aaPredicted RBP49.59■■■■■ 5.53
NECTIN3-201ENST00000319792 ARAP1Q96P48 1450 aa49.58■■■■■ 5.53
NECTIN3-201ENST00000319792 EFCAB5A4FU69 1503 aa49.55■■■■■ 5.52
NECTIN3-201ENST00000319792 CHMP7Q8WUX9 453 aaPredicted RBP49.55■■■■■ 5.52
NECTIN3-201ENST00000319792 IQGAP2Q13576 1575 aa49.54■■■■■ 5.52
NECTIN3-201ENST00000319792 VPS8Q8N3P4 1428 aa49.51■■■■■ 5.52
NECTIN3-201ENST00000319792 CEP170Q5SW79 1584 aa49.48■■■■■ 5.51
NECTIN3-201ENST00000319792 KIAA0586Q9BVV6 1533 aa49.47■■■■■ 5.51
NECTIN3-201ENST00000319792 NUP160Q12769 1436 aa49.45■■■■■ 5.51
NECTIN3-201ENST00000319792 CHD1O14646 1710 aa49.44■■■■■ 5.51
NECTIN3-201ENST00000319792 SAMD9Q5K651 1589 aa49.43■■■■■ 5.5
NECTIN3-201ENST00000319792 FBLN2P98095 1184 aa49.36■■■■■ 5.49
NECTIN3-201ENST00000319792 UGGT2Q9NYU1 1516 aa49.32■■■■■ 5.49
NECTIN3-201ENST00000319792 FHOD3Q2V2M9 1422 aa49.18■■■■■ 5.46
NECTIN3-201ENST00000319792 P3H3Q8IVL6 736 aa49.07■■■■■ 5.45
NECTIN3-201ENST00000319792 KIAA0556O60303 1618 aa49.05■■■■■ 5.44
NECTIN3-201ENST00000319792 DISP1Q96F81 1524 aa49.04■■■■■ 5.44
NECTIN3-201ENST00000319792 FMN1Q68DA7 1419 aa49.01■■■■■ 5.44
NECTIN3-201ENST00000319792 PCF11O94913 1555 aaKnown RBP48.97■■■■■ 5.43
NECTIN3-201ENST00000319792 SHROOM2Q13796 1616 aa48.9■■■■■ 5.42
NECTIN3-201ENST00000319792 JPH4Q96JJ6 628 aa48.9■■■■■ 5.42
NECTIN3-201ENST00000319792 FYCO1Q9BQS8 1478 aa48.9■■■■■ 5.42
NECTIN3-201ENST00000319792 CLASP1Q7Z460 1538 aa48.89■■■■■ 5.42
NECTIN3-201ENST00000319792 CASKIN1Q8WXD9 1431 aa48.89■■■■■ 5.42
NECTIN3-201ENST00000319792 MAP3K1Q13233 1512 aa48.82■■■■■ 5.41
NECTIN3-201ENST00000319792 CARMIL2Q6F5E8 1435 aa48.82■■■■■ 5.41
NECTIN3-201ENST00000319792 APLP2Q06481 763 aa48.82■■■■■ 5.41
NECTIN3-201ENST00000319792 PPARGC1BQ86YN6 1023 aaKnown RBP48.74■■■■■ 5.39
NECTIN3-201ENST00000319792 CFAP43Q8NDM7 1665 aa48.73■■■■■ 5.39
NECTIN3-201ENST00000319792 TIAM1Q13009 1591 aa48.72■■■■■ 5.39
NECTIN3-201ENST00000319792 PRG4Q92954 1404 aaPredicted RBP48.68■■■■■ 5.38
NECTIN3-201ENST00000319792 TRIM26Q12899 539 aaPredicted RBP48.63■■■■■ 5.37
NECTIN3-201ENST00000319792 LRRIQ1Q96JM4 1722 aa48.62■■■■■ 5.37
NECTIN3-201ENST00000319792 HECW1Q76N89 1606 aa48.61■■■■■ 5.37
NECTIN3-201ENST00000319792 RAPGEF6Q8TEU7 1601 aa48.52■■■■■ 5.36
NECTIN3-201ENST00000319792 KANK4Q5T7N3 995 aaPredicted RBP48.48■■■■■ 5.35
NECTIN3-201ENST00000319792 CCDC18Q5T9S5 1454 aa48.46■■■■■ 5.35
NECTIN3-201ENST00000319792 ATP1B4Q9UN42 357 aaPredicted RBP48.45■■■■■ 5.35
NECTIN3-201ENST00000319792 LRRC9Q6ZRR7 1453 aa48.44■■■■■ 5.35
NECTIN3-201ENST00000319792 ERCC6L2Q5T890 1561 aa48.43■■■■■ 5.34
NECTIN3-201ENST00000319792 TTBK1Q5TCY1 1321 aaPredicted RBP48.42■■■■■ 5.34
NECTIN3-201ENST00000319792 OSCARQ8IYS5 282 aa48.41■■■■■ 5.34
NECTIN3-201ENST00000319792 ABCA8O94911 1581 aa48.38■■■■■ 5.34
NECTIN3-201ENST00000319792 PCGF6Q9BYE7 350 aa48.37■■■■■ 5.33
NECTIN3-201ENST00000319792 EPRSP07814 1512 aaKnown RBP48.37■■■■■ 5.33
NECTIN3-201ENST00000319792 NUP153P49790 1475 aaKnown RBP48.35■■■■■ 5.33
NECTIN3-201ENST00000319792 PLB1Q6P1J6 1458 aa48.34■■■■■ 5.33
NECTIN3-201ENST00000319792 PTPRGP23470 1445 aa48.33■■■■■ 5.33
NECTIN3-201ENST00000319792 CDK13Q14004 1512 aaKnown RBP48.23■■■■■ 5.31
NECTIN3-201ENST00000319792 EHBP1L1Q8N3D4 1523 aa48.18■■■■■ 5.3
NECTIN3-201ENST00000319792 MAGI3Q5TCQ9 1506 aa48.13■■■■■ 5.3
NECTIN3-201ENST00000319792 MTUS2Q5JR59 1369 aa48.11■■■■■ 5.29
NECTIN3-201ENST00000319792 UACAQ9BZF9 1416 aa48.09■■■■■ 5.29
NECTIN3-201ENST00000319792 SUPT6HQ7KZ85 1726 aaKnown RBP48.04■■■■■ 5.28
NECTIN3-201ENST00000319792 ABCC2Q92887 1545 aa48.02■■■■■ 5.28
NECTIN3-201ENST00000319792 RRBP1Q9P2E9 1410 aaKnown RBP47.98■■■■■ 5.27
NECTIN3-201ENST00000319792 ATP10BO94823 1461 aa47.97■■■■■ 5.27
NECTIN3-201ENST00000319792 UHRF1BP1LA0JNW5 1464 aa47.96■■■■■ 5.27
NECTIN3-201ENST00000319792 ARID3CA6NKF2 412 aa47.95■■■■■ 5.27
NECTIN3-201ENST00000319792 ARHGEF11O15085 1522 aa47.94■■■■■ 5.26
NECTIN3-201ENST00000319792 PHLDB1Q86UU1 1377 aa47.93■■■■■ 5.26
NECTIN3-201ENST00000319792 NCOA2Q15596 1464 aa47.91■■■■■ 5.26
NECTIN3-201ENST00000319792 CDK11AQ9UQ88 783 aaPredicted RBP47.89■■■■■ 5.26
NECTIN3-201ENST00000319792 TROQ12816 1431 aaPredicted RBP47.84■■■■■ 5.25
NECTIN3-201ENST00000319792 ADCY10Q96PN6 1610 aa47.82■■■■■ 5.25
NECTIN3-201ENST00000319792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP47.8■■■■■ 5.24
NECTIN3-201ENST00000319792 HNRNPUL2Q1KMD3 747 aaKnown RBP47.8■■■■■ 5.24
NECTIN3-201ENST00000319792 CCNB3Q8WWL7 1395 aa47.79■■■■■ 5.24
NECTIN3-201ENST00000319792 KDM5BQ9UGL1 1544 aa47.74■■■■■ 5.23
NECTIN3-201ENST00000319792 MYOM3Q5VTT5 1437 aa47.71■■■■■ 5.23
NECTIN3-201ENST00000319792 ZCCHC11Q5TAX3 1644 aaKnown RBP47.7■■■■■ 5.23
NECTIN3-201ENST00000319792 FGD6Q6ZV73 1430 aa47.67■■■■■ 5.22
NECTIN3-201ENST00000319792 PLEKHD1A6NEE1 506 aa47.64■■■■■ 5.22
NECTIN3-201ENST00000319792 KIF14Q15058 1648 aa47.64■■■■■ 5.22
NECTIN3-201ENST00000319792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP47.59■■■■■ 5.21
NECTIN3-201ENST00000319792 RIMBP3CA6NJZ7 1639 aa47.53■■■■■ 5.2
NECTIN3-201ENST00000319792 RIMBP3BA6NNM3 1639 aa47.53■■■■■ 5.2
NECTIN3-201ENST00000319792 RIMBP3Q9UFD9 1639 aa47.53■■■■■ 5.2
NECTIN3-201ENST00000319792 MIA2Q96PC5 1412 aa47.51■■■■■ 5.2
NECTIN3-201ENST00000319792 ITSN2Q9NZM3 1697 aa47.5■■■■■ 5.19
NECTIN3-201ENST00000319792 PTPN23Q9H3S7 1636 aa47.49■■■■■ 5.19
NECTIN3-201ENST00000319792 ABCC10Q5T3U5 1492 aa47.48■■■■■ 5.19
NECTIN3-201ENST00000319792 TCOF1Q13428 1488 aaKnown RBP47.45■■■■■ 5.19
NECTIN3-201ENST00000319792 CDC42BPAQ5VT25 1732 aa47.39■■■■■ 5.18
NECTIN3-201ENST00000319792 GPATCH8Q9UKJ3 1502 aaKnown RBP47.38■■■■■ 5.18
NECTIN3-201ENST00000319792 FAM50AQ14320 339 aaKnown RBP47.36■■■■■ 5.17
NECTIN3-201ENST00000319792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP47.27■■■■■ 5.16
NECTIN3-201ENST00000319792 WDR7Q9Y4E6 1490 aa47.26■■■■■ 5.16
NECTIN3-201ENST00000319792 TTC37Q6PGP7 1564 aa47.26■■■■■ 5.16
NECTIN3-201ENST00000319792 PREX2Q70Z35 1606 aa47.23■■■■■ 5.15
NECTIN3-201ENST00000319792 MYO5CQ9NQX4 1742 aa47.16■■■■■ 5.14
NECTIN3-201ENST00000319792 CDC42BPBQ9Y5S2 1711 aa47.16■■■■■ 5.14
NECTIN3-201ENST00000319792 ASXL2Q76L83 1435 aa47.16■■■■■ 5.14
NECTIN3-201ENST00000319792 NPM1P06748 294 aaKnown RBP eCLIP47.15■■■■■ 5.14
NECTIN3-201ENST00000319792 CFDP1Q9UEE9 299 aaPredicted RBP47.15■■■■■ 5.14
NECTIN3-201ENST00000319792 ITGAEP38570 1179 aa47.14■■■■■ 5.14
NECTIN3-201ENST00000319792 CAMSAP2Q08AD1 1489 aa47.13■■■■■ 5.13
NECTIN3-201ENST00000319792 DNMT1P26358 1616 aaKnown RBP47.08■■■■■ 5.13
NECTIN3-201ENST00000319792 CYB5RLQ6IPT4 315 aa47.08■■■■■ 5.13
NECTIN3-201ENST00000319792 KCNH8Q96L42 1107 aa47.06■■■■■ 5.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms